RNA–Protein interactions for RNA: ENST00000555567.5

PGF-206, Transcript of placental growth factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PGF, Length 1,927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-206ENST00000555567 EDC4Q6P2E9 1401 aaKnown RBP29.6■■■□□ 2.33
PGF-206ENST00000555567 TNNT2P45379 298 aaPredicted RBP29.6■■■□□ 2.33
PGF-206ENST00000555567 TSHZ2Q9NRE2 1034 aa29.6■■■□□ 2.33
PGF-206ENST00000555567 CADPS2Q86UW7 1296 aa29.59■■■□□ 2.33
PGF-206ENST00000555567 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.59■■■□□ 2.33
PGF-206ENST00000555567 PMFBP1Q8TBY8 1022 aa29.59■■■□□ 2.33
PGF-206ENST00000555567 ANKARQ7Z5J8 1434 aa29.58■■■□□ 2.33
PGF-206ENST00000555567 ERICH6BQ5W0A0 696 aa29.57■■■□□ 2.32
PGF-206ENST00000555567 ACEP12821 1306 aa29.57■■■□□ 2.32
PGF-206ENST00000555567 ESCO1Q5FWF5 840 aa29.57■■■□□ 2.32
PGF-206ENST00000555567 ZNF692Q9BU19 519 aaPredicted RBP29.56■■■□□ 2.32
PGF-206ENST00000555567 DCCP43146 1447 aa29.56■■■□□ 2.32
PGF-206ENST00000555567 ORAI2Q96SN7 254 aa29.53■■■□□ 2.32
PGF-206ENST00000555567 MST1RQ04912 1400 aa29.52■■■□□ 2.32
PGF-206ENST00000555567 NRKQ7Z2Y5 1582 aa29.52■■■□□ 2.32
PGF-206ENST00000555567 C1orf167Q5SNV9 1468 aa29.51■■■□□ 2.32
PGF-206ENST00000555567 NGDNQ8NEJ9 315 aaKnown RBP29.51■■■□□ 2.31
PGF-206ENST00000555567 POLR3AO14802 1390 aaPredicted RBP29.5■■■□□ 2.31
PGF-206ENST00000555567 NME9Q86XW9 330 aa29.5■■■□□ 2.31
PGF-206ENST00000555567 PHF8Q9UPP1 1060 aa29.5■■■□□ 2.31
PGF-206ENST00000555567 USP6P35125 1406 aa29.49■■■□□ 2.31
PGF-206ENST00000555567 MTHFSP49914 203 aa29.49■■■□□ 2.31
PGF-206ENST00000555567 ZRANB1Q9UGI0 708 aa29.49■■■□□ 2.31
PGF-206ENST00000555567 SLAIN2Q9P270 581 aa29.47■■■□□ 2.31
PGF-206ENST00000555567 ADAMTS8Q9UP79 889 aa29.47■■■□□ 2.31
PGF-206ENST00000555567 SMG6Q86US8 1419 aaKnown RBP29.47■■■□□ 2.31
PGF-206ENST00000555567 INSRP06213 1382 aa29.47■■■□□ 2.31
PGF-206ENST00000555567 SSH2Q76I76 1423 aa29.47■■■□□ 2.31
PGF-206ENST00000555567 TTC21BQ7Z4L5 1316 aa29.46■■■□□ 2.31
PGF-206ENST00000555567 BLMP54132 1417 aaPredicted RBP29.45■■■□□ 2.31
PGF-206ENST00000555567 SENP3-EIF4A1A0A087X0R7 540 aa29.45■■■□□ 2.3
PGF-206ENST00000555567 WDR43Q15061 677 aaKnown RBP eCLIP29.43■■■□□ 2.3
PGF-206ENST00000555567 FOXO3O43524 673 aa29.42■■■□□ 2.3
PGF-206ENST00000555567 SHPRHQ149N8 1683 aa29.42■■■□□ 2.3
PGF-206ENST00000555567 FBLN1P23142 703 aa29.39■■■□□ 2.3
PGF-206ENST00000555567 PSME1Q06323 249 aa29.39■■■□□ 2.3
PGF-206ENST00000555567 XPCQ01831 940 aaPredicted RBP29.38■■■□□ 2.29
PGF-206ENST00000555567 BRINP3Q76B58 766 aa29.37■■■□□ 2.29
PGF-206ENST00000555567 DDX17Q92841 729 aaKnown RBP29.37■■■□□ 2.29
PGF-206ENST00000555567 COG3Q96JB2 828 aa29.37■■■□□ 2.29
PGF-206ENST00000555567 CFAP53Q96M91 514 aa29.35■■■□□ 2.29
PGF-206ENST00000555567 IRX6P78412 446 aaPredicted RBP29.35■■■□□ 2.29
PGF-206ENST00000555567 CERKQ8TCT0 537 aa29.35■■■□□ 2.29
PGF-206ENST00000555567 NUDCQ9Y266 331 aa29.35■■■□□ 2.29
PGF-206ENST00000555567 MAP2P11137 1827 aaKnown RBP29.35■■■□□ 2.29
PGF-206ENST00000555567 TTC21AQ8NDW8 1320 aa29.34■■■□□ 2.29
PGF-206ENST00000555567 KIF1AQ12756 1690 aa29.34■■■□□ 2.29
PGF-206ENST00000555567 COL3A1P02461 1466 aaPredicted RBP29.34■■■□□ 2.29
PGF-206ENST00000555567 OVOS2A0A0J9YW53 1432 aa29.34■■■□□ 2.29
PGF-206ENST00000555567 OVOS2Q6IE36 1432 aa29.34■■■□□ 2.29
PGF-206ENST00000555567 PAK3O75914 559 aaPredicted RBP29.33■■■□□ 2.29
PGF-206ENST00000555567 POLKQ9UBT6 870 aa29.33■■■□□ 2.29
PGF-206ENST00000555567 PPP4R2Q9NY27 417 aa29.33■■■□□ 2.29
PGF-206ENST00000555567 AATKQ6ZMQ8 1374 aa29.31■■■□□ 2.28
PGF-206ENST00000555567 PNPLA6Q8IY17 1366 aa29.31■■■□□ 2.28
PGF-206ENST00000555567 PIK3C2AO00443 1686 aa29.3■■■□□ 2.28
PGF-206ENST00000555567 KRT28Q7Z3Y7 464 aa29.3■■■□□ 2.28
PGF-206ENST00000555567 TOM1O60784 492 aa29.3■■■□□ 2.28
PGF-206ENST00000555567 UBAP1LF5GYI3 381 aa29.29■■■□□ 2.28
PGF-206ENST00000555567 PIP4K2BP78356 416 aa29.28■■■□□ 2.28
PGF-206ENST00000555567 CCDC146Q8IYE0 955 aa29.28■■■□□ 2.28
PGF-206ENST00000555567 EMILIN1Q9Y6C2 1016 aa29.28■■■□□ 2.28
PGF-206ENST00000555567 RNF123Q5XPI4 1314 aa29.27■■■□□ 2.28
PGF-206ENST00000555567 SALL2Q9Y467 1007 aaPredicted RBP29.27■■■□□ 2.28
PGF-206ENST00000555567 NPHP3Q7Z494 1330 aa29.27■■■□□ 2.28
PGF-206ENST00000555567 USP31Q70CQ4 1352 aa29.27■■■□□ 2.28
PGF-206ENST00000555567 RRS1Q15050 365 aaKnown RBP29.24■■■□□ 2.27
PGF-206ENST00000555567 NUTM2GQ5VZR2 741 aa29.24■■■□□ 2.27
PGF-206ENST00000555567 LMOD2Q6P5Q4 547 aa29.24■■■□□ 2.27
PGF-206ENST00000555567 ROBO1Q9Y6N7 1651 aa29.23■■■□□ 2.27
PGF-206ENST00000555567 MARF1Q9Y4F3 1742 aaKnown RBP29.23■■■□□ 2.27
PGF-206ENST00000555567 PPM1GO15355 546 aaPredicted RBP29.23■■■□□ 2.27
PGF-206ENST00000555567 ABTB2Q8N961 1025 aa29.23■■■□□ 2.27
PGF-206ENST00000555567 IQSEC2Q5JU85 1478 aa29.23■■■□□ 2.27
PGF-206ENST00000555567 USP54Q70EL1 1684 aa29.2■■■□□ 2.27
PGF-206ENST00000555567 CDK12Q9NYV4 1490 aaPredicted RBP29.2■■■□□ 2.26
PGF-206ENST00000555567 DIAPH1O60610 1272 aaKnown RBP29.2■■■□□ 2.26
PGF-206ENST00000555567 PLEKHG5O94827 1062 aa29.19■■■□□ 2.26
PGF-206ENST00000555567 NLRP6P59044 892 aa29.18■■■□□ 2.26
PGF-206ENST00000555567 PXDNQ92626 1479 aa29.18■■■□□ 2.26
PGF-206ENST00000555567 APAF1O14727 1248 aa29.18■■■□□ 2.26
PGF-206ENST00000555567 U2AF1L5P0DN76 240 aaPredicted RBP29.18■■■□□ 2.26
PGF-206ENST00000555567 U2AF1Q01081 240 aaKnown RBP eCLIP29.18■■■□□ 2.26
PGF-206ENST00000555567 TRPM3Q9HCF6 1732 aaPredicted RBP29.17■■■□□ 2.26
PGF-206ENST00000555567 U2SURPO15042 1029 aaKnown RBP29.15■■■□□ 2.26
PGF-206ENST00000555567 PEAK1Q9H792 1746 aa29.15■■■□□ 2.26
PGF-206ENST00000555567 SOX12O15370 315 aa29.14■■■□□ 2.26
PGF-206ENST00000555567 NHSL1Q5SYE7 1610 aa29.14■■■□□ 2.26
PGF-206ENST00000555567 RUNDC1Q96C34 613 aa29.14■■■□□ 2.25
PGF-206ENST00000555567 SOS2Q07890 1332 aaPredicted RBP29.13■■■□□ 2.25
PGF-206ENST00000555567 IL13P35225 146 aa29.12■■■□□ 2.25
PGF-206ENST00000555567 ZNF521Q96K83 1311 aa29.11■■■□□ 2.25
PGF-206ENST00000555567 SBNO1A3KN83 1393 aa29.11■■■□□ 2.25
PGF-206ENST00000555567 PDE3BQ13370 1112 aa29.11■■■□□ 2.25
PGF-206ENST00000555567 RBM19Q9Y4C8 960 aaKnown RBP29.11■■■□□ 2.25
PGF-206ENST00000555567 SPATA31A3Q5VYP0 1347 aa29.1■■■□□ 2.25
PGF-206ENST00000555567 MAP3K19Q56UN5 1328 aa29.09■■■□□ 2.25
PGF-206ENST00000555567 CDCA7LQ96GN5 454 aa29.09■■■□□ 2.25
PGF-206ENST00000555567 TNS3Q68CZ2 1445 aa29.09■■■□□ 2.25
PGF-206ENST00000555567 PLEKHF1Q96S99 279 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms