RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
SRP54-206ENST00000555317 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
SRP54-206ENST00000555317 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
SRP54-206ENST00000555317 BRD4O60885 1362 aaPredicted RBP16.98■□□□□ 0.31
SRP54-206ENST00000555317 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
SRP54-206ENST00000555317 USP21Q9UK80 565 aa16.97■□□□□ 0.31
SRP54-206ENST00000555317 TMF1P82094 1093 aa16.96■□□□□ 0.31
SRP54-206ENST00000555317 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
SRP54-206ENST00000555317 USP6P35125 1406 aa16.96■□□□□ 0.3
SRP54-206ENST00000555317 NUTM2GQ5VZR2 741 aa16.95■□□□□ 0.3
SRP54-206ENST00000555317 TESK2Q96S53 571 aa16.95■□□□□ 0.3
SRP54-206ENST00000555317 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
SRP54-206ENST00000555317 AKAP12Q02952 1782 aa16.94■□□□□ 0.3
SRP54-206ENST00000555317 RXRBP28702 533 aa16.94■□□□□ 0.3
SRP54-206ENST00000555317 KTN1Q86UP2 1357 aaKnown RBP16.93■□□□□ 0.3
SRP54-206ENST00000555317 CDCA8Q53HL2 280 aa16.93■□□□□ 0.3
SRP54-206ENST00000555317 HDGFL2Q7Z4V5 671 aaPredicted RBP16.93■□□□□ 0.3
SRP54-206ENST00000555317 FNBP4Q8N3X1 1017 aaPredicted RBP16.93■□□□□ 0.3
SRP54-206ENST00000555317 PUS7Q96PZ0 661 aaKnown RBP16.93■□□□□ 0.3
SRP54-206ENST00000555317 QTRT2Q9H974 415 aaKnown RBP16.93■□□□□ 0.3
SRP54-206ENST00000555317 TRPC5Q9UL62 973 aaPredicted RBP16.93■□□□□ 0.3
SRP54-206ENST00000555317 TERF2IPQ9NYB0 399 aa16.92■□□□□ 0.3
SRP54-206ENST00000555317 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
SRP54-206ENST00000555317 NINLQ9Y2I6 1382 aa16.91■□□□□ 0.3
SRP54-206ENST00000555317 CRYBG1Q9Y4K1 1723 aa16.91■□□□□ 0.3
SRP54-206ENST00000555317 SOCS7O14512 581 aa16.91■□□□□ 0.3
SRP54-206ENST00000555317 NLRP13Q86W25 1043 aa16.91■□□□□ 0.3
SRP54-206ENST00000555317 PHRF1Q9P1Y6 1649 aaKnown RBP16.91■□□□□ 0.3
SRP54-206ENST00000555317 RBM6P78332 1123 aaKnown RBP16.9■□□□□ 0.3
SRP54-206ENST00000555317 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
SRP54-206ENST00000555317 MON2Q7Z3U7 1717 aa16.9■□□□□ 0.3
SRP54-206ENST00000555317 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.9■□□□□ 0.3
SRP54-206ENST00000555317 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
SRP54-206ENST00000555317 COL14A1Q05707 1796 aaKnown RBP16.89■□□□□ 0.3
SRP54-206ENST00000555317 NLRP6P59044 892 aa16.89■□□□□ 0.29
SRP54-206ENST00000555317 EIF4G2P78344 907 aaKnown RBP eCLIP16.89■□□□□ 0.298e-7■■■■■ 28.7
SRP54-206ENST00000555317 UNC5CLQ8IV45 518 aa16.89■□□□□ 0.29
SRP54-206ENST00000555317 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
SRP54-206ENST00000555317 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
SRP54-206ENST00000555317 SLIT2O94813 1529 aa16.88■□□□□ 0.29
SRP54-206ENST00000555317 SLC12A5Q9H2X9 1139 aa16.88■□□□□ 0.29
SRP54-206ENST00000555317 TTC21BQ7Z4L5 1316 aa16.88■□□□□ 0.29
SRP54-206ENST00000555317 ATRNO75882 1429 aa16.87■□□□□ 0.29
SRP54-206ENST00000555317 BCL9LQ86UU0 1499 aa16.87■□□□□ 0.29
SRP54-206ENST00000555317 NRKQ7Z2Y5 1582 aa16.87■□□□□ 0.29
SRP54-206ENST00000555317 USP19O94966 1318 aa16.87■□□□□ 0.29
SRP54-206ENST00000555317 PIK3C2AO00443 1686 aa16.87■□□□□ 0.29
SRP54-206ENST00000555317 FAM83GA6ND36 823 aa16.86■□□□□ 0.29
SRP54-206ENST00000555317 ZC3H6P61129 1189 aaKnown RBP16.86■□□□□ 0.29
SRP54-206ENST00000555317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.86■□□□□ 0.29
SRP54-206ENST00000555317 CCDC9Q9Y3X0 531 aaKnown RBP16.86■□□□□ 0.29
SRP54-206ENST00000555317 KIAA0232Q92628 1395 aa16.86■□□□□ 0.29
SRP54-206ENST00000555317 SSH2Q76I76 1423 aa16.86■□□□□ 0.29
SRP54-206ENST00000555317 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
SRP54-206ENST00000555317 BTG4Q9NY30 223 aa16.85■□□□□ 0.29
SRP54-206ENST00000555317 A0A1W2PP64 1363 aa16.85■□□□□ 0.29
SRP54-206ENST00000555317 EDC4Q6P2E9 1401 aaKnown RBP16.85■□□□□ 0.29
SRP54-206ENST00000555317 CD163L1Q9NR16 1453 aa16.85■□□□□ 0.29
SRP54-206ENST00000555317 HSPA5P11021 654 aaKnown RBP16.84■□□□□ 0.29
SRP54-206ENST00000555317 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
SRP54-206ENST00000555317 GCP02774 474 aa16.83■□□□□ 0.28
SRP54-206ENST00000555317 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
SRP54-206ENST00000555317 ANKRD36BQ8N2N9 1353 aa16.82■□□□□ 0.28
SRP54-206ENST00000555317 CHRNA2Q15822 529 aa16.82■□□□□ 0.28
SRP54-206ENST00000555317 GJD4Q96KN9 370 aaPredicted RBP16.82■□□□□ 0.28
SRP54-206ENST00000555317 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
SRP54-206ENST00000555317 SLIT3O75094 1523 aa16.81■□□□□ 0.28
SRP54-206ENST00000555317 RGS12O14924 1447 aa16.81■□□□□ 0.28
SRP54-206ENST00000555317 CPDO75976 1380 aa16.81■□□□□ 0.28
SRP54-206ENST00000555317 VPS72Q15906 364 aa16.81■□□□□ 0.28
SRP54-206ENST00000555317 KCNH5Q8NCM2 988 aa16.81■□□□□ 0.28
SRP54-206ENST00000555317 SOX12O15370 315 aa16.8■□□□□ 0.28
SRP54-206ENST00000555317 EVA1CP58658 441 aa16.79■□□□□ 0.28
SRP54-206ENST00000555317 NME9Q86XW9 330 aa16.79■□□□□ 0.28
SRP54-206ENST00000555317 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
SRP54-206ENST00000555317 A0A0G2JS52 829 aa16.77■□□□□ 0.28
SRP54-206ENST00000555317 MYT1Q01538 1121 aa16.77■□□□□ 0.28
SRP54-206ENST00000555317 MYOM1P52179 1685 aa16.77■□□□□ 0.28
SRP54-206ENST00000555317 USP54Q70EL1 1684 aa16.77■□□□□ 0.28
SRP54-206ENST00000555317 GLI3P10071 1580 aa16.77■□□□□ 0.27
SRP54-206ENST00000555317 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
SRP54-206ENST00000555317 COG3Q96JB2 828 aa16.75■□□□□ 0.27
SRP54-206ENST00000555317 ZRANB1Q9UGI0 708 aa16.75■□□□□ 0.27
SRP54-206ENST00000555317 LMO7Q8WWI1 1683 aa16.74■□□□□ 0.27
SRP54-206ENST00000555317 NFAT5O94916 1531 aa16.74■□□□□ 0.27
SRP54-206ENST00000555317 AATKQ6ZMQ8 1374 aa16.74■□□□□ 0.27
SRP54-206ENST00000555317 KIF20BQ96Q89 1820 aa16.73■□□□□ 0.27
SRP54-206ENST00000555317 CAMTA1Q9Y6Y1 1673 aa16.73■□□□□ 0.27
SRP54-206ENST00000555317 SPATA31A5Q5VU36 1347 aa16.72■□□□□ 0.27
SRP54-206ENST00000555317 SPATA31A7Q8IWB4 1347 aa16.72■□□□□ 0.27
SRP54-206ENST00000555317 LTN1O94822 1766 aa16.72■□□□□ 0.27
SRP54-206ENST00000555317 OVOS2A0A0J9YW53 1432 aa16.71■□□□□ 0.27
SRP54-206ENST00000555317 OVOS2Q6IE36 1432 aa16.71■□□□□ 0.27
SRP54-206ENST00000555317 NSD3Q9BZ95 1437 aa16.71■□□□□ 0.27
SRP54-206ENST00000555317 FAM98CQ17RN3 349 aaKnown RBP16.71■□□□□ 0.27
SRP54-206ENST00000555317 ARHGEF25Q86VW2 580 aa16.71■□□□□ 0.27
SRP54-206ENST00000555317 SEPT12Q8IYM1 358 aa16.71■□□□□ 0.27
SRP54-206ENST00000555317 USP35Q9P2H5 1018 aa16.71■□□□□ 0.27
SRP54-206ENST00000555317 COL5A2P05997 1499 aaPredicted RBP16.71■□□□□ 0.27
SRP54-206ENST00000555317 ABCC6O95255 1503 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms