RNA–Protein interactions for RNA: ENST00000555175.1

PSMC6-209, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-209ENST00000555175 MAP10Q9P2G4 905 aa10.86□□□□□ -0.67
PSMC6-209ENST00000555175 CTHP32929 405 aa10.85□□□□□ -0.67
PSMC6-209ENST00000555175 PER1O15534 1290 aaPredicted RBP10.84□□□□□ -0.67
PSMC6-209ENST00000555175 LILRB3O75022 631 aa10.84□□□□□ -0.67
PSMC6-209ENST00000555175 VARSP26640 1264 aaKnown RBP10.84□□□□□ -0.67
PSMC6-209ENST00000555175 LCE2AQ5TA79 106 aaPredicted RBP10.84□□□□□ -0.67
PSMC6-209ENST00000555175 TLL2Q9Y6L7 1015 aa10.84□□□□□ -0.67
PSMC6-209ENST00000555175 TRIM47Q96LD4 638 aa10.83□□□□□ -0.68
PSMC6-209ENST00000555175 WASF2Q9Y6W5 498 aa10.83□□□□□ -0.68
PSMC6-209ENST00000555175 CLK2P49760 499 aaKnown RBP10.82□□□□□ -0.68
PSMC6-209ENST00000555175 MPNDQ8N594 471 aa10.82□□□□□ -0.68
PSMC6-209ENST00000555175 SENP2Q9HC62 589 aa10.82□□□□□ -0.68
PSMC6-209ENST00000555175 SNRPBP14678 240 aaKnown RBP10.81□□□□□ -0.68
PSMC6-209ENST00000555175 TREML4Q6UXN2 200 aa10.81□□□□□ -0.68
PSMC6-209ENST00000555175 NUTM2BA6NNL0 878 aaPredicted RBP10.8□□□□□ -0.68
PSMC6-209ENST00000555175 NUTM2EB1AL46 878 aaPredicted RBP10.8□□□□□ -0.68
PSMC6-209ENST00000555175 NUTM2DQ5VT03 806 aaPredicted RBP10.8□□□□□ -0.68
PSMC6-209ENST00000555175 NUTM2AQ8IVF1 878 aaPredicted RBP10.8□□□□□ -0.68
PSMC6-209ENST00000555175 FOXJ1Q92949 421 aa10.79□□□□□ -0.68
PSMC6-209ENST00000555175 RSPH6AQ9H0K4 717 aa10.79□□□□□ -0.68
PSMC6-209ENST00000555175 RTL5Q5HYW3 569 aaPredicted RBP10.78□□□□□ -0.68
PSMC6-209ENST00000555175 TSC1Q92574 1164 aa10.78□□□□□ -0.68
PSMC6-209ENST00000555175 KIFC2Q96AC6 838 aa10.78□□□□□ -0.68
PSMC6-209ENST00000555175 PLEKHG3A1L390 1219 aa10.77□□□□□ -0.69
PSMC6-209ENST00000555175 CAPN5O15484 640 aaPredicted RBP10.77□□□□□ -0.69
PSMC6-209ENST00000555175 FAM174AQ8TBP5 190 aa10.77□□□□□ -0.69
PSMC6-209ENST00000555175 BCANQ96GW7 911 aa10.77□□□□□ -0.69
PSMC6-209ENST00000555175 BMP1P13497 986 aa10.76□□□□□ -0.69
PSMC6-209ENST00000555175 TRIM46Q7Z4K8 759 aa10.76□□□□□ -0.69
PSMC6-209ENST00000555175 HELBQ8NG08 1087 aaPredicted RBP10.76□□□□□ -0.69
PSMC6-209ENST00000555175 NFX1Q12986 1120 aaKnown RBP10.75□□□□□ -0.69
PSMC6-209ENST00000555175 NNTQ13423 1086 aa10.75□□□□□ -0.69
PSMC6-209ENST00000555175 C4orf48Q5BLP8 95 aa10.75□□□□□ -0.69
PSMC6-209ENST00000555175 POLR3EQ9NVU0 708 aa10.75□□□□□ -0.69
PSMC6-209ENST00000555175 CDK15Q96Q40 435 aa10.74□□□□□ -0.69
PSMC6-209ENST00000555175 WFS1O76024 890 aa10.73□□□□□ -0.69
PSMC6-209ENST00000555175 ADH1CP00326 375 aa10.73□□□□□ -0.69
PSMC6-209ENST00000555175 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
PSMC6-209ENST00000555175 GPBP1L1Q9HC44 474 aaPredicted RBP10.73□□□□□ -0.69
PSMC6-209ENST00000555175 BPHLQ86WA6 291 aaPredicted RBP10.72□□□□□ -0.69
PSMC6-209ENST00000555175 TIMP2P16035 220 aa10.71□□□□□ -0.69
PSMC6-209ENST00000555175 ARMC2Q8NEN0 867 aa10.71□□□□□ -0.69
PSMC6-209ENST00000555175 SH3D19Q5HYK7 790 aa10.7□□□□□ -0.7
PSMC6-209ENST00000555175 SH3RF1Q7Z6J0 888 aa10.7□□□□□ -0.7
PSMC6-209ENST00000555175 C1QTNF2Q9BXJ5 285 aa10.7□□□□□ -0.7
PSMC6-209ENST00000555175 KLF16Q9BXK1 252 aaPredicted RBP10.7□□□□□ -0.7
PSMC6-209ENST00000555175 AGERQ15109 404 aa10.69□□□□□ -0.7
PSMC6-209ENST00000555175 SKIV2LQ15477 1246 aaKnown RBP10.69□□□□□ -0.7
PSMC6-209ENST00000555175 NBPF14Q5TI25 921 aa10.69□□□□□ -0.7
PSMC6-209ENST00000555175 FAM117AQ9C073 453 aa10.69□□□□□ -0.7
PSMC6-209ENST00000555175 TERTO14746 1132 aaKnown RBP10.68□□□□□ -0.7
PSMC6-209ENST00000555175 SLC24A1O60721 1099 aa10.68□□□□□ -0.7
PSMC6-209ENST00000555175 WDR4P57081 412 aaKnown RBP10.68□□□□□ -0.7
PSMC6-209ENST00000555175 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
PSMC6-209ENST00000555175 FBXO31Q5XUX0 539 aaPredicted RBP10.68□□□□□ -0.7
PSMC6-209ENST00000555175 SH3BP5LQ7L8J4 393 aa10.68□□□□□ -0.7
PSMC6-209ENST00000555175 DDRGK1Q96HY6 314 aa10.68□□□□□ -0.7
PSMC6-209ENST00000555175 NR3C2P08235 984 aa10.67□□□□□ -0.7
PSMC6-209ENST00000555175 CTDSPL2Q05D32 466 aa10.67□□□□□ -0.7
PSMC6-209ENST00000555175 ARID5BQ14865 1188 aa10.67□□□□□ -0.7
PSMC6-209ENST00000555175 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
PSMC6-209ENST00000555175 GRM5P41594 1212 aa10.66□□□□□ -0.7
PSMC6-209ENST00000555175 NR5A1Q13285 461 aa10.66□□□□□ -0.7
PSMC6-209ENST00000555175 MRPL14Q6P1L8 145 aaKnown RBP10.65□□□□□ -0.7
PSMC6-209ENST00000555175 TRMT44Q8IYL2 757 aaKnown RBP10.65□□□□□ -0.7
PSMC6-209ENST00000555175 PROCA1Q8NCQ7 364 aaPredicted RBP10.65□□□□□ -0.7
PSMC6-209ENST00000555175 GPKOWQ92917 476 aaPredicted RBP eCLIP10.65□□□□□ -0.7
PSMC6-209ENST00000555175 ZFP42Q96MM3 310 aa10.65□□□□□ -0.7
PSMC6-209ENST00000555175 PPP2R2DQ66LE6 453 aa10.64□□□□□ -0.71
PSMC6-209ENST00000555175 MAP4K5Q9Y4K4 846 aa10.64□□□□□ -0.71
PSMC6-209ENST00000555175 WIPF1O43516 503 aa10.63□□□□□ -0.71
PSMC6-209ENST00000555175 LRRN4Q8WUT4 740 aa10.63□□□□□ -0.71
PSMC6-209ENST00000555175 ZFAND3Q9H8U3 227 aa10.63□□□□□ -0.71
PSMC6-209ENST00000555175 ZIC2O95409 532 aaPredicted RBP10.62□□□□□ -0.71
PSMC6-209ENST00000555175 ITPKCQ96DU7 683 aa10.62□□□□□ -0.71
PSMC6-209ENST00000555175 MAGEB6P1A0A0J9YX57 407 aa10.61□□□□□ -0.71
PSMC6-209ENST00000555175 PURBQ96QR8 312 aaKnown RBP10.61□□□□□ -0.71
PSMC6-209ENST00000555175 FSHRP23945 695 aa10.6□□□□□ -0.71
PSMC6-209ENST00000555175 SCARF1Q14162 830 aa10.6□□□□□ -0.71
PSMC6-209ENST00000555175 NXF1Q9UBU9 619 aaKnown RBP10.6□□□□□ -0.71
PSMC6-209ENST00000555175 ERFEQ4G0M1 354 aa10.59□□□□□ -0.71
PSMC6-209ENST00000555175 CARD14Q9BXL6 1004 aa10.59□□□□□ -0.71
PSMC6-209ENST00000555175 FKBPLQ9UIM3 349 aa10.59□□□□□ -0.71
PSMC6-209ENST00000555175 PDXDC2PQ6P474 469 aa10.58□□□□□ -0.72
PSMC6-209ENST00000555175 VASH1Q7L8A9 365 aaPredicted RBP10.58□□□□□ -0.72
PSMC6-209ENST00000555175 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
PSMC6-209ENST00000555175 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.72
PSMC6-209ENST00000555175 NR6A1Q15406 480 aa10.57□□□□□ -0.72
PSMC6-209ENST00000555175 MEIOBQ8N635 442 aa10.56□□□□□ -0.72
PSMC6-209ENST00000555175 AP1G2O75843 785 aa10.55□□□□□ -0.72
PSMC6-209ENST00000555175 SLC16A10Q8TF71 515 aa10.55□□□□□ -0.72
PSMC6-209ENST00000555175 ARHGAP9Q9BRR9 750 aa10.55□□□□□ -0.72
PSMC6-209ENST00000555175 H3BM21 787 aa10.54□□□□□ -0.72
PSMC6-209ENST00000555175 CCDC116Q8IYX3 515 aa10.54□□□□□ -0.72
PSMC6-209ENST00000555175 ATP1B4Q9UN42 357 aaPredicted RBP10.54□□□□□ -0.72
PSMC6-209ENST00000555175 LINC00528Q8N1L1 170 aa10.53□□□□□ -0.72
PSMC6-209ENST00000555175 OCSTAMPQ9BR26 566 aa10.53□□□□□ -0.72
PSMC6-209ENST00000555175 EMILIN1Q9Y6C2 1016 aa10.53□□□□□ -0.72
PSMC6-209ENST00000555175 SOBPA7XYQ1 873 aa10.52□□□□□ -0.73
PSMC6-209ENST00000555175 USP17L8P0C7I0 530 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms