RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PLEKHG3A1L390 1219 aa14.83□□□□□ -0.04
TMEM260-206ENST00000555046 TMF1P82094 1093 aa14.83□□□□□ -0.04
TMEM260-206ENST00000555046 SF3B2Q13435 895 aaKnown RBP14.83□□□□□ -0.04
TMEM260-206ENST00000555046 KRT28Q7Z3Y7 464 aa14.83□□□□□ -0.04
TMEM260-206ENST00000555046 ZNF784Q8NCA9 323 aaPredicted RBP14.83□□□□□ -0.04
TMEM260-206ENST00000555046 DDX17Q92841 729 aaKnown RBP14.83□□□□□ -0.04
TMEM260-206ENST00000555046 CABP2Q9NPB3 220 aa14.83□□□□□ -0.04
TMEM260-206ENST00000555046 SOS2Q07890 1332 aaPredicted RBP14.83□□□□□ -0.04
TMEM260-206ENST00000555046 PMFBP1Q8TBY8 1022 aa14.82□□□□□ -0.04
TMEM260-206ENST00000555046 TRPM1Q7Z4N2 1603 aa14.81□□□□□ -0.04
TMEM260-206ENST00000555046 C1QTNF8P60827 252 aa14.81□□□□□ -0.04
TMEM260-206ENST00000555046 ZNF692Q9BU19 519 aaPredicted RBP14.81□□□□□ -0.04
TMEM260-206ENST00000555046 USP47Q96K76 1375 aa14.81□□□□□ -0.04
TMEM260-206ENST00000555046 R3HDM1Q15032 1099 aaKnown RBP14.8□□□□□ -0.04
TMEM260-206ENST00000555046 CABP1Q9NZU7 370 aa14.8□□□□□ -0.04
TMEM260-206ENST00000555046 TESK2Q96S53 571 aa14.79□□□□□ -0.04
TMEM260-206ENST00000555046 PRR36Q9H6K5 1346 aa14.79□□□□□ -0.04
TMEM260-206ENST00000555046 NALCNQ8IZF0 1738 aa14.78□□□□□ -0.04
TMEM260-206ENST00000555046 GJD4Q96KN9 370 aaPredicted RBP14.78□□□□□ -0.04
TMEM260-206ENST00000555046 RGPD1P0DJD0 1748 aa14.78□□□□□ -0.04
TMEM260-206ENST00000555046 ADGRB2O60241 1585 aa14.77□□□□□ -0.04
TMEM260-206ENST00000555046 TULP4Q9NRJ4 1543 aa14.77□□□□□ -0.04
TMEM260-206ENST00000555046 ZEB1P37275 1124 aaPredicted RBP14.77□□□□□ -0.05
TMEM260-206ENST00000555046 ACEP12821 1306 aa14.76□□□□□ -0.05
TMEM260-206ENST00000555046 XPCQ01831 940 aaPredicted RBP14.76□□□□□ -0.05
TMEM260-206ENST00000555046 TNS1Q9HBL0 1735 aaKnown RBP14.75□□□□□ -0.05
TMEM260-206ENST00000555046 SBNO1A3KN83 1393 aa14.75□□□□□ -0.05
TMEM260-206ENST00000555046 BRD4O60885 1362 aaPredicted RBP14.75□□□□□ -0.05
TMEM260-206ENST00000555046 SPATA31A3Q5VYP0 1347 aa14.75□□□□□ -0.05
TMEM260-206ENST00000555046 CHD4Q14839 1912 aa14.75□□□□□ -0.05
TMEM260-206ENST00000555046 PAK3O75914 559 aaPredicted RBP14.75□□□□□ -0.05
TMEM260-206ENST00000555046 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
TMEM260-206ENST00000555046 LMOD2Q6P5Q4 547 aa14.75□□□□□ -0.05
TMEM260-206ENST00000555046 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
TMEM260-206ENST00000555046 TERF2IPQ9NYB0 399 aa14.75□□□□□ -0.05
TMEM260-206ENST00000555046 BAG6P46379 1132 aa14.74□□□□□ -0.05
TMEM260-206ENST00000555046 HDGFL2Q7Z4V5 671 aaPredicted RBP14.74□□□□□ -0.05
TMEM260-206ENST00000555046 ARHGEF28Q8N1W1 1705 aaKnown RBP14.74□□□□□ -0.05
TMEM260-206ENST00000555046 POLR3AO14802 1390 aaPredicted RBP14.73□□□□□ -0.05
TMEM260-206ENST00000555046 ARHGEF10O15013 1369 aa14.73□□□□□ -0.05
TMEM260-206ENST00000555046 HSPA5P11021 654 aaKnown RBP14.73□□□□□ -0.05
TMEM260-206ENST00000555046 PPIP5K1Q6PFW1 1433 aa14.73□□□□□ -0.05
TMEM260-206ENST00000555046 NINLQ9Y2I6 1382 aa14.73□□□□□ -0.05
TMEM260-206ENST00000555046 HAP1P54257 671 aaPredicted RBP14.72□□□□□ -0.05
TMEM260-206ENST00000555046 FMN2Q9NZ56 1722 aa14.72□□□□□ -0.05
TMEM260-206ENST00000555046 ATP7BP35670 1465 aa14.71□□□□□ -0.05
TMEM260-206ENST00000555046 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
TMEM260-206ENST00000555046 NLRP13Q86W25 1043 aa14.7□□□□□ -0.06
TMEM260-206ENST00000555046 ABTB2Q8N961 1025 aa14.7□□□□□ -0.06
TMEM260-206ENST00000555046 SLC12A5Q9H2X9 1139 aa14.7□□□□□ -0.06
TMEM260-206ENST00000555046 PXDNQ92626 1479 aa14.69□□□□□ -0.06
TMEM260-206ENST00000555046 KIF1AQ12756 1690 aa14.68□□□□□ -0.06
TMEM260-206ENST00000555046 DISP2A7MBM2 1401 aa14.67□□□□□ -0.06
TMEM260-206ENST00000555046 SLIT2O94813 1529 aa14.67□□□□□ -0.06
TMEM260-206ENST00000555046 EN1Q05925 392 aaPredicted RBP14.67□□□□□ -0.06
TMEM260-206ENST00000555046 TTC21AQ8NDW8 1320 aa14.66□□□□□ -0.06
TMEM260-206ENST00000555046 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
TMEM260-206ENST00000555046 QRICH2Q9H0J4 1663 aa14.66□□□□□ -0.06
TMEM260-206ENST00000555046 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
TMEM260-206ENST00000555046 SEPT12Q8IYM1 358 aa14.66□□□□□ -0.06
TMEM260-206ENST00000555046 RREB1Q92766 1687 aa14.65□□□□□ -0.06
TMEM260-206ENST00000555046 KTN1Q86UP2 1357 aaKnown RBP14.65□□□□□ -0.06
TMEM260-206ENST00000555046 NLRP6P59044 892 aa14.65□□□□□ -0.06
TMEM260-206ENST00000555046 NUP188Q5SRE5 1749 aa14.65□□□□□ -0.06
TMEM260-206ENST00000555046 POLR3GLQ9BT43 218 aa14.64□□□□□ -0.07
TMEM260-206ENST00000555046 TTC21BQ7Z4L5 1316 aa14.64□□□□□ -0.07
TMEM260-206ENST00000555046 KRT27Q7Z3Y8 459 aa14.63□□□□□ -0.07
TMEM260-206ENST00000555046 USP6P35125 1406 aa14.63□□□□□ -0.07
TMEM260-206ENST00000555046 CPSF1Q10570 1443 aaKnown RBP14.63□□□□□ -0.07
TMEM260-206ENST00000555046 PLCH1Q4KWH8 1693 aa14.62□□□□□ -0.07
TMEM260-206ENST00000555046 KCNH5Q8NCM2 988 aa14.62□□□□□ -0.07
TMEM260-206ENST00000555046 USP32Q8NFA0 1604 aa14.62□□□□□ -0.07
TMEM260-206ENST00000555046 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
TMEM260-206ENST00000555046 UNC5CLQ8IV45 518 aa14.61□□□□□ -0.07
TMEM260-206ENST00000555046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.61□□□□□ -0.07
TMEM260-206ENST00000555046 CABLES1Q8TDN4 633 aa14.61□□□□□ -0.07
TMEM260-206ENST00000555046 GCP02774 474 aa14.6□□□□□ -0.07
TMEM260-206ENST00000555046 NUTM2GQ5VZR2 741 aa14.6□□□□□ -0.07
TMEM260-206ENST00000555046 PPP1R1BQ9UD71 204 aaPredicted RBP14.6□□□□□ -0.07
TMEM260-206ENST00000555046 ANKRD36BQ8N2N9 1353 aa14.6□□□□□ -0.07
TMEM260-206ENST00000555046 NWD2Q9ULI1 1742 aa14.59□□□□□ -0.07
TMEM260-206ENST00000555046 ITSN1Q15811 1721 aa14.58□□□□□ -0.07
TMEM260-206ENST00000555046 PRDM11Q9NQV5 511 aa14.58□□□□□ -0.08
TMEM260-206ENST00000555046 NRKQ7Z2Y5 1582 aa14.58□□□□□ -0.08
TMEM260-206ENST00000555046 EDC4Q6P2E9 1401 aaKnown RBP14.58□□□□□ -0.08
TMEM260-206ENST00000555046 SSH2Q76I76 1423 aa14.58□□□□□ -0.08
TMEM260-206ENST00000555046 EZH2Q15910 746 aaKnown RBP14.57□□□□□ -0.08
TMEM260-206ENST00000555046 COG3Q96JB2 828 aa14.57□□□□□ -0.08
TMEM260-206ENST00000555046 A0A1W2PP64 1363 aa14.57□□□□□ -0.08
TMEM260-206ENST00000555046 RGPD8O14715 1765 aaPredicted RBP14.56□□□□□ -0.08
TMEM260-206ENST00000555046 FAM83GA6ND36 823 aa14.56□□□□□ -0.08
TMEM260-206ENST00000555046 MYOM1P52179 1685 aa14.55□□□□□ -0.08
TMEM260-206ENST00000555046 C11orf95C9JLR9 678 aaPredicted RBP14.55□□□□□ -0.08
TMEM260-206ENST00000555046 ONECUT3O60422 494 aaPredicted RBP14.55□□□□□ -0.08
TMEM260-206ENST00000555046 SLC34A2O95436 690 aa14.55□□□□□ -0.08
TMEM260-206ENST00000555046 ZC3H6P61129 1189 aaKnown RBP14.55□□□□□ -0.08
TMEM260-206ENST00000555046 PANK3Q9H999 370 aa14.55□□□□□ -0.08
TMEM260-206ENST00000555046 USP19O94966 1318 aa14.55□□□□□ -0.08
TMEM260-206ENST00000555046 CGNL1Q0VF96 1302 aa14.55□□□□□ -0.08
TMEM260-206ENST00000555046 USP31Q70CQ4 1352 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms