RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 ROBO1Q9Y6N7 1651 aa17.56■□□□□ 0.4
SIX1-203ENST00000554986 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
SIX1-203ENST00000554986 PIP4K2BP78356 416 aa17.55■□□□□ 0.4
SIX1-203ENST00000554986 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
SIX1-203ENST00000554986 NEFMP07197 916 aa17.55■□□□□ 0.4
SIX1-203ENST00000554986 BRINP3Q76B58 766 aa17.55■□□□□ 0.4
SIX1-203ENST00000554986 CCDC61Q9Y6R9 512 aa17.54■□□□□ 0.4
SIX1-203ENST00000554986 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
SIX1-203ENST00000554986 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
SIX1-203ENST00000554986 MYOM1P52179 1685 aa17.53■□□□□ 0.4
SIX1-203ENST00000554986 PMFBP1Q8TBY8 1022 aa17.53■□□□□ 0.4
SIX1-203ENST00000554986 PUS7Q96PZ0 661 aaKnown RBP17.53■□□□□ 0.4
SIX1-203ENST00000554986 BACH2Q9BYV9 841 aa17.52■□□□□ 0.4
SIX1-203ENST00000554986 CABP1Q9NZU7 370 aa17.52■□□□□ 0.4
SIX1-203ENST00000554986 PHF8Q9UPP1 1060 aa17.52■□□□□ 0.4
SIX1-203ENST00000554986 POLR3GLQ9BT43 218 aa17.51■□□□□ 0.39
SIX1-203ENST00000554986 KIF1AQ12756 1690 aa17.51■□□□□ 0.39
SIX1-203ENST00000554986 PDE4AP27815 886 aa17.51■□□□□ 0.39
SIX1-203ENST00000554986 CDCA8Q53HL2 280 aa17.51■□□□□ 0.39
SIX1-203ENST00000554986 DDX17Q92841 729 aaKnown RBP17.51■□□□□ 0.39
SIX1-203ENST00000554986 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
SIX1-203ENST00000554986 DDRGK1Q96HY6 314 aa17.49■□□□□ 0.39
SIX1-203ENST00000554986 NHSL1Q5SYE7 1610 aa17.49■□□□□ 0.39
SIX1-203ENST00000554986 PLEKHG3A1L390 1219 aa17.49■□□□□ 0.39
SIX1-203ENST00000554986 TMC1Q8TDI8 760 aa17.49■□□□□ 0.39
SIX1-203ENST00000554986 FOXO3O43524 673 aa17.48■□□□□ 0.39
SIX1-203ENST00000554986 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
SIX1-203ENST00000554986 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
SIX1-203ENST00000554986 CD163L1Q9NR16 1453 aa17.48■□□□□ 0.39
SIX1-203ENST00000554986 ACEP12821 1306 aa17.47■□□□□ 0.39
SIX1-203ENST00000554986 RRP1P56182 461 aaKnown RBP17.47■□□□□ 0.39
SIX1-203ENST00000554986 AKAP12Q02952 1782 aa17.47■□□□□ 0.39
SIX1-203ENST00000554986 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
SIX1-203ENST00000554986 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.39
SIX1-203ENST00000554986 NGDNQ8NEJ9 315 aaKnown RBP17.46■□□□□ 0.39
SIX1-203ENST00000554986 AHDC1Q5TGY3 1603 aaPredicted RBP17.45■□□□□ 0.38
SIX1-203ENST00000554986 CPSF1Q10570 1443 aaKnown RBP17.44■□□□□ 0.38
SIX1-203ENST00000554986 NINLQ9Y2I6 1382 aa17.44■□□□□ 0.38
SIX1-203ENST00000554986 GSE1Q14687 1217 aa17.44■□□□□ 0.38
SIX1-203ENST00000554986 RTN4Q9NQC3 1192 aaKnown RBP17.44■□□□□ 0.38
SIX1-203ENST00000554986 PHLPP1O60346 1717 aa17.44■□□□□ 0.38
SIX1-203ENST00000554986 PXDNQ92626 1479 aa17.44■□□□□ 0.38
SIX1-203ENST00000554986 A0A1W2PP64 1363 aa17.44■□□□□ 0.38
SIX1-203ENST00000554986 FBXO41Q8TF61 875 aa17.44■□□□□ 0.38
SIX1-203ENST00000554986 NPHP3Q7Z494 1330 aa17.43■□□□□ 0.38
SIX1-203ENST00000554986 MON2Q7Z3U7 1717 aa17.43■□□□□ 0.38
SIX1-203ENST00000554986 LAS1LQ9Y4W2 734 aaKnown RBP17.43■□□□□ 0.38
SIX1-203ENST00000554986 TRPM3Q9HCF6 1732 aaPredicted RBP17.42■□□□□ 0.38
SIX1-203ENST00000554986 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
SIX1-203ENST00000554986 COL16A1Q07092 1604 aaPredicted RBP17.42■□□□□ 0.38
SIX1-203ENST00000554986 ANKRD36BQ8N2N9 1353 aa17.41■□□□□ 0.38
SIX1-203ENST00000554986 SOS2Q07890 1332 aaPredicted RBP17.41■□□□□ 0.38
SIX1-203ENST00000554986 PSME1Q06323 249 aa17.41■□□□□ 0.38
SIX1-203ENST00000554986 PDE3BQ13370 1112 aa17.41■□□□□ 0.38
SIX1-203ENST00000554986 KRT28Q7Z3Y7 464 aa17.41■□□□□ 0.38
SIX1-203ENST00000554986 USP6P35125 1406 aa17.41■□□□□ 0.38
SIX1-203ENST00000554986 NRKQ7Z2Y5 1582 aa17.4■□□□□ 0.38
SIX1-203ENST00000554986 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
SIX1-203ENST00000554986 TERF2IPQ9NYB0 399 aa17.4■□□□□ 0.38
SIX1-203ENST00000554986 HSPA1LP34931 641 aa17.39■□□□□ 0.37
SIX1-203ENST00000554986 SSH2Q76I76 1423 aa17.39■□□□□ 0.37
SIX1-203ENST00000554986 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
SIX1-203ENST00000554986 CARD14Q9BXL6 1004 aa17.39■□□□□ 0.37
SIX1-203ENST00000554986 PANK3Q9H999 370 aa17.39■□□□□ 0.37
SIX1-203ENST00000554986 EXOC6Q8TAG9 804 aa17.38■□□□□ 0.37
SIX1-203ENST00000554986 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
SIX1-203ENST00000554986 INSRP06213 1382 aa17.38■□□□□ 0.37
SIX1-203ENST00000554986 ALS2Q96Q42 1657 aa17.37■□□□□ 0.37
SIX1-203ENST00000554986 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.37■□□□□ 0.37
SIX1-203ENST00000554986 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
SIX1-203ENST00000554986 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
SIX1-203ENST00000554986 EDC4Q6P2E9 1401 aaKnown RBP17.35■□□□□ 0.37
SIX1-203ENST00000554986 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
SIX1-203ENST00000554986 TNS3Q68CZ2 1445 aa17.35■□□□□ 0.37
SIX1-203ENST00000554986 NSD3Q9BZ95 1437 aa17.35■□□□□ 0.37
SIX1-203ENST00000554986 SPATA31A3Q5VYP0 1347 aa17.34■□□□□ 0.37
SIX1-203ENST00000554986 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
SIX1-203ENST00000554986 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
SIX1-203ENST00000554986 NFKBIBQ15653 356 aa17.34■□□□□ 0.37
SIX1-203ENST00000554986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.34■□□□□ 0.37
SIX1-203ENST00000554986 RSPH6AQ9H0K4 717 aa17.34■□□□□ 0.37
SIX1-203ENST00000554986 RALBP1Q15311 655 aa17.33■□□□□ 0.37
SIX1-203ENST00000554986 MYBBP1AQ9BQG0 1328 aaKnown RBP17.33■□□□□ 0.37
SIX1-203ENST00000554986 LRRC59Q96AG4 307 aaKnown RBP17.32■□□□□ 0.36
SIX1-203ENST00000554986 LMOD2Q6P5Q4 547 aa17.31■□□□□ 0.36
SIX1-203ENST00000554986 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
SIX1-203ENST00000554986 NME9Q86XW9 330 aa17.31■□□□□ 0.36
SIX1-203ENST00000554986 FAM43AQ8N2R8 423 aa17.31■□□□□ 0.36
SIX1-203ENST00000554986 ZRANB1Q9UGI0 708 aa17.31■□□□□ 0.36
SIX1-203ENST00000554986 MARF1Q9Y4F3 1742 aaKnown RBP17.31■□□□□ 0.36
SIX1-203ENST00000554986 PER1O15534 1290 aaPredicted RBP17.3■□□□□ 0.36
SIX1-203ENST00000554986 KIF20BQ96Q89 1820 aa17.3■□□□□ 0.36
SIX1-203ENST00000554986 TTC21AQ8NDW8 1320 aa17.3■□□□□ 0.36
SIX1-203ENST00000554986 PNPLA6Q8IY17 1366 aa17.3■□□□□ 0.36
SIX1-203ENST00000554986 ABTB2Q8N961 1025 aa17.29■□□□□ 0.36
SIX1-203ENST00000554986 SHPRHQ149N8 1683 aa17.29■□□□□ 0.36
SIX1-203ENST00000554986 CRYBG1Q9Y4K1 1723 aa17.28■□□□□ 0.36
SIX1-203ENST00000554986 COL22A1Q8NFW1 1626 aaPredicted RBP17.28■□□□□ 0.36
SIX1-203ENST00000554986 ILDR1Q86SU0 546 aaPredicted RBP17.28■□□□□ 0.36
SIX1-203ENST00000554986 ARHGEF10O15013 1369 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms