RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 ANO2Q9NQ90 1003 aa4.77□□□□□ -1.65
KTN1-217ENST00000554831 BLMP54132 1417 aaPredicted RBP4.77□□□□□ -1.65
KTN1-217ENST00000554831 CHAF1AQ13111 956 aaPredicted RBP4.77□□□□□ -1.65
KTN1-217ENST00000554831 CDK19Q9BWU1 502 aa4.77□□□□□ -1.65
KTN1-217ENST00000554831 GRPEL1Q9HAV7 217 aa4.77□□□□□ -1.65
KTN1-217ENST00000554831 CWC22Q9HCG8 908 aaKnown RBP4.77□□□□□ -1.65
KTN1-217ENST00000554831 EID1Q9Y6B2 187 aa4.77□□□□□ -1.65
KTN1-217ENST00000554831 KDM6BO15054 1643 aa4.77□□□□□ -1.65
KTN1-217ENST00000554831 FYB1O15117 783 aa4.77□□□□□ -1.65
KTN1-217ENST00000554831 NEK4P51957 841 aa4.77□□□□□ -1.65
KTN1-217ENST00000554831 RILPL2Q969X0 211 aa4.77□□□□□ -1.65
KTN1-217ENST00000554831 TRAPPC8Q9Y2L5 1435 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 NRDCO43847 1150 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 LMOD2Q6P5Q4 547 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 ZMYM4Q5VZL5 1548 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 RTEL1-TNFRSF6BF6WH68 1400 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 CSPP1Q1MSJ5 1256 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 SYCP2Q9BX26 1530 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 SEC24BO95487 1268 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 SULT6B1Q6IMI4 303 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 DMRT2Q9Y5R5 561 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 ZBTB7CA1YPR0 619 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 TPRNQ4KMQ1 711 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 RUFY2Q8WXA3 655 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 ANKRD36BQ8N2N9 1353 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 NOS1P29475 1434 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 ADGRL1O94910 1474 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 ABCC10Q5T3U5 1492 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 TARBP1Q13395 1621 aaKnown RBP4.76□□□□□ -1.65
KTN1-217ENST00000554831 TEFQ10587 303 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 CYB5RLQ6IPT4 315 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 TSPYL4Q9UJ04 414 aa4.76□□□□□ -1.65
KTN1-217ENST00000554831 HTATSF1O43719 755 aaKnown RBP4.75□□□□□ -1.65
KTN1-217ENST00000554831 HSP90AB4PQ58FF6 505 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 THUMPD2Q9BTF0 503 aaKnown RBP4.75□□□□□ -1.65
KTN1-217ENST00000554831 C1orf115Q9H7X2 142 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 ZBTB40Q9NUA8 1239 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 FANCAO15360 1455 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 ZKSCAN1P17029 563 aaPredicted RBP4.75□□□□□ -1.65
KTN1-217ENST00000554831 MCTP1Q6DN14 999 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.75□□□□□ -1.65
KTN1-217ENST00000554831 GPATCH3Q96I76 525 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 IFT57Q9NWB7 429 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 PLEKHG5O94827 1062 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 SLC4A2P04920 1241 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 GAS2L2Q8NHY3 880 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 ERC2O15083 957 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 CAVIN1Q6NZI2 390 aaKnown RBP4.75□□□□□ -1.65
KTN1-217ENST00000554831 NOL8Q76FK4 1167 aaKnown RBP4.75□□□□□ -1.65
KTN1-217ENST00000554831 SNX21Q969T3 373 aa4.75□□□□□ -1.65
KTN1-217ENST00000554831 EIF2AK4Q9P2K8 1649 aaKnown RBP4.75□□□□□ -1.65
KTN1-217ENST00000554831 PLA2R1Q13018 1463 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 XRCC6P12956 609 aaKnown RBP eCLIP4.74□□□□□ -1.65
KTN1-217ENST00000554831 CCT4P50991 539 aaKnown RBP4.74□□□□□ -1.65
KTN1-217ENST00000554831 CCDC173Q0VFZ6 552 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 FOXD4L5Q5VV16 416 aaPredicted RBP4.74□□□□□ -1.65
KTN1-217ENST00000554831 FOXD4L4Q8WXT5 416 aaPredicted RBP4.74□□□□□ -1.65
KTN1-217ENST00000554831 GNAI2P04899 355 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 LTV1Q96GA3 475 aaPredicted RBP4.74□□□□□ -1.65
KTN1-217ENST00000554831 TNNQ9UQP3 1299 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 KIF3AQ9Y496 699 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 CD109Q6YHK3 1445 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 KDM5CP41229 1560 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 NUCB1Q02818 461 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 CLASRPQ8N2M8 674 aaKnown RBP4.74□□□□□ -1.65
KTN1-217ENST00000554831 TNPO1Q92973 898 aaKnown RBP4.74□□□□□ -1.65
KTN1-217ENST00000554831 MAP7D2Q96T17 732 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 DIAPH3Q9NSV4 1193 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 ZMYM3Q14202 1370 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 ATP10AO60312 1499 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 PRPF40AO75400 957 aaKnown RBP4.74□□□□□ -1.65
KTN1-217ENST00000554831 NLRP6P59044 892 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 ZSCAN30Q86W11 494 aa4.74□□□□□ -1.65
KTN1-217ENST00000554831 MAGI2Q86UL8 1455 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 GOLGA6L6A8MZA4 724 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 SURF6O75683 361 aaKnown RBP4.73□□□□□ -1.65
KTN1-217ENST00000554831 UBTFL1P0CB47 393 aaPredicted RBP4.73□□□□□ -1.65
KTN1-217ENST00000554831 CLCN1P35523 988 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 CCDC30Q5VVM6 783 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 TXNDC2Q86VQ3 553 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 WDR7Q9Y4E6 1490 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 PTPRTO14522 1441 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 VAMP4O75379 141 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 TBC1D9Q6ZT07 1266 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 NUDT16Q96DE0 195 aaKnown RBP4.73□□□□□ -1.65
KTN1-217ENST00000554831 SRCIN1Q9C0H9 1055 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 FAM69CQ0P6D2 419 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 KLHL40Q2TBA0 621 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 FOXD4L6Q3SYB3 417 aaPredicted RBP4.73□□□□□ -1.65
KTN1-217ENST00000554831 FOXD4L3Q6VB84 417 aaPredicted RBP4.73□□□□□ -1.65
KTN1-217ENST00000554831 RBM25P49756 843 aaKnown RBP4.73□□□□□ -1.65
KTN1-217ENST00000554831 C9orf78Q9NZ63 289 aaPredicted RBP4.73□□□□□ -1.65
KTN1-217ENST00000554831 ARHGEF5Q12774 1597 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 HOMEZQ8IX15 550 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 POLKQ9UBT6 870 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 SMC3Q9UQE7 1217 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 EMILIN1Q9Y6C2 1016 aa4.73□□□□□ -1.65
KTN1-217ENST00000554831 PDCP20941 246 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 WAPLQ7Z5K2 1190 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 MTERF4Q7Z6M4 381 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms