RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 ACEP12821 1306 aa12.45□□□□□ -0.42
ACTN1-213ENST00000554508 GJD4Q96KN9 370 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-213ENST00000554508 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
ACTN1-213ENST00000554508 RGS12O14924 1447 aa12.45□□□□□ -0.42
ACTN1-213ENST00000554508 EVC2Q86UK5 1308 aa12.44□□□□□ -0.42
ACTN1-213ENST00000554508 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
ACTN1-213ENST00000554508 UPF1Q92900 1129 aaKnown RBP eCLIP12.44□□□□□ -0.42
ACTN1-213ENST00000554508 CABP2Q9NPB3 220 aa12.44□□□□□ -0.42
ACTN1-213ENST00000554508 PLCH1Q4KWH8 1693 aa12.44□□□□□ -0.42
ACTN1-213ENST00000554508 CRYBG1Q9Y4K1 1723 aa12.43□□□□□ -0.42
ACTN1-213ENST00000554508 PPIP5K1Q6PFW1 1433 aa12.43□□□□□ -0.42
ACTN1-213ENST00000554508 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-213ENST00000554508 FAM83GA6ND36 823 aa12.42□□□□□ -0.42
ACTN1-213ENST00000554508 VPS72Q15906 364 aa12.42□□□□□ -0.42
ACTN1-213ENST00000554508 COL14A1Q05707 1796 aaKnown RBP12.42□□□□□ -0.42
ACTN1-213ENST00000554508 CARD11Q9BXL7 1154 aa12.41□□□□□ -0.42
ACTN1-213ENST00000554508 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.42
ACTN1-213ENST00000554508 CABP1Q9NZU7 370 aa12.4□□□□□ -0.42
ACTN1-213ENST00000554508 GLI3P10071 1580 aa12.39□□□□□ -0.43
ACTN1-213ENST00000554508 ABTB2Q8N961 1025 aa12.39□□□□□ -0.43
ACTN1-213ENST00000554508 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-213ENST00000554508 PHRF1Q9P1Y6 1649 aaKnown RBP12.39□□□□□ -0.43
ACTN1-213ENST00000554508 ATAD2Q6PL18 1390 aa12.39□□□□□ -0.43
ACTN1-213ENST00000554508 SBNO2Q9Y2G9 1366 aa12.39□□□□□ -0.43
ACTN1-213ENST00000554508 NRAPQ86VF7 1730 aa12.38□□□□□ -0.43
ACTN1-213ENST00000554508 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
ACTN1-213ENST00000554508 BTG4Q9NY30 223 aa12.38□□□□□ -0.43
ACTN1-213ENST00000554508 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
ACTN1-213ENST00000554508 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
ACTN1-213ENST00000554508 ONECUT3O60422 494 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-213ENST00000554508 PRDM11Q9NQV5 511 aa12.37□□□□□ -0.43
ACTN1-213ENST00000554508 AKAP12Q02952 1782 aa12.36□□□□□ -0.43
ACTN1-213ENST00000554508 NUTM2GQ5VZR2 741 aa12.36□□□□□ -0.43
ACTN1-213ENST00000554508 USP6P35125 1406 aa12.36□□□□□ -0.43
ACTN1-213ENST00000554508 KIAA0232Q92628 1395 aa12.35□□□□□ -0.43
ACTN1-213ENST00000554508 SLC24A1O60721 1099 aa12.35□□□□□ -0.43
ACTN1-213ENST00000554508 USP19O94966 1318 aa12.35□□□□□ -0.43
ACTN1-213ENST00000554508 CLSPNQ9HAW4 1339 aa12.35□□□□□ -0.43
ACTN1-213ENST00000554508 NLRP6P59044 892 aa12.34□□□□□ -0.43
ACTN1-213ENST00000554508 ZC3H6P61129 1189 aaKnown RBP12.34□□□□□ -0.43
ACTN1-213ENST00000554508 CCDC125Q86Z20 511 aa12.34□□□□□ -0.43
ACTN1-213ENST00000554508 SEPT12Q8IYM1 358 aa12.34□□□□□ -0.43
ACTN1-213ENST00000554508 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
ACTN1-213ENST00000554508 GCP02774 474 aa12.33□□□□□ -0.44
ACTN1-213ENST00000554508 PUS7Q96PZ0 661 aaKnown RBP12.33□□□□□ -0.44
ACTN1-213ENST00000554508 SSH2Q76I76 1423 aa12.33□□□□□ -0.44
ACTN1-213ENST00000554508 NRKQ7Z2Y5 1582 aa12.33□□□□□ -0.44
ACTN1-213ENST00000554508 SPATA31A5Q5VU36 1347 aa12.33□□□□□ -0.44
ACTN1-213ENST00000554508 SPATA31A7Q8IWB4 1347 aa12.33□□□□□ -0.44
ACTN1-213ENST00000554508 CPDO75976 1380 aa12.32□□□□□ -0.44
ACTN1-213ENST00000554508 CPSF1Q10570 1443 aaKnown RBP12.32□□□□□ -0.44
ACTN1-213ENST00000554508 CHRNA2Q15822 529 aa12.32□□□□□ -0.44
ACTN1-213ENST00000554508 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
ACTN1-213ENST00000554508 TTC21AQ8NDW8 1320 aa12.32□□□□□ -0.44
ACTN1-213ENST00000554508 EVA1CP58658 441 aa12.31□□□□□ -0.44
ACTN1-213ENST00000554508 PIK3C2AO00443 1686 aa12.31□□□□□ -0.44
ACTN1-213ENST00000554508 MON2Q7Z3U7 1717 aa12.31□□□□□ -0.44
ACTN1-213ENST00000554508 KTN1Q86UP2 1357 aaKnown RBP12.3□□□□□ -0.44
ACTN1-213ENST00000554508 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
ACTN1-213ENST00000554508 KRT27Q7Z3Y8 459 aa12.3□□□□□ -0.44
ACTN1-213ENST00000554508 STRN4Q9NRL3 753 aa12.3□□□□□ -0.44
ACTN1-213ENST00000554508 SLIT3O75094 1523 aa12.3□□□□□ -0.44
ACTN1-213ENST00000554508 LMO7Q8WWI1 1683 aa12.29□□□□□ -0.44
ACTN1-213ENST00000554508 ST20-MTHFSA0A0A6YYL1 179 aa12.29□□□□□ -0.44
ACTN1-213ENST00000554508 A0A0G2JS52 829 aa12.29□□□□□ -0.44
ACTN1-213ENST00000554508 MYT1Q01538 1121 aa12.29□□□□□ -0.44
ACTN1-213ENST00000554508 SPATA31A1Q5TZJ5 1347 aa12.29□□□□□ -0.44
ACTN1-213ENST00000554508 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
ACTN1-213ENST00000554508 EP400Q96L91 3159 aa12.28□□□□□ -0.44
ACTN1-213ENST00000554508 HDGFL2Q7Z4V5 671 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-213ENST00000554508 KCNH5Q8NCM2 988 aa12.28□□□□□ -0.44
ACTN1-213ENST00000554508 TMC1Q8TDI8 760 aa12.28□□□□□ -0.44
ACTN1-213ENST00000554508 TESK2Q96S53 571 aa12.28□□□□□ -0.44
ACTN1-213ENST00000554508 THSD7AQ9UPZ6 1657 aa12.27□□□□□ -0.45
ACTN1-213ENST00000554508 TERF2IPQ9NYB0 399 aa12.27□□□□□ -0.45
ACTN1-213ENST00000554508 AATKQ6ZMQ8 1374 aa12.27□□□□□ -0.45
ACTN1-213ENST00000554508 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-213ENST00000554508 COL18A1P39060 1754 aa12.26□□□□□ -0.45
ACTN1-213ENST00000554508 BARGINQ6ZT62 677 aa12.26□□□□□ -0.45
ACTN1-213ENST00000554508 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
ACTN1-213ENST00000554508 THRAP3Q9Y2W1 955 aaKnown RBP12.26□□□□□ -0.45
ACTN1-213ENST00000554508 NINLQ9Y2I6 1382 aa12.26□□□□□ -0.45
ACTN1-213ENST00000554508 CD163L1Q9NR16 1453 aa12.26□□□□□ -0.45
ACTN1-213ENST00000554508 USP54Q70EL1 1684 aa12.26□□□□□ -0.45
ACTN1-213ENST00000554508 SF3B2Q13435 895 aaKnown RBP12.25□□□□□ -0.45
ACTN1-213ENST00000554508 LARP1Q6PKG0 1096 aaKnown RBP12.25□□□□□ -0.45
ACTN1-213ENST00000554508 ARHGEF25Q86VW2 580 aa12.25□□□□□ -0.45
ACTN1-213ENST00000554508 USP31Q70CQ4 1352 aa12.25□□□□□ -0.45
ACTN1-213ENST00000554508 USP47Q96K76 1375 aa12.25□□□□□ -0.45
ACTN1-213ENST00000554508 RGPD5Q99666 1765 aa12.25□□□□□ -0.45
ACTN1-213ENST00000554508 ZBTB7CA1YPR0 619 aa12.24□□□□□ -0.45
ACTN1-213ENST00000554508 COL5A2P05997 1499 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-213ENST00000554508 TMF1P82094 1093 aa12.24□□□□□ -0.45
ACTN1-213ENST00000554508 EDC4Q6P2E9 1401 aaKnown RBP12.24□□□□□ -0.45
ACTN1-213ENST00000554508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.24□□□□□ -0.452e-7■■■■□ 20.7
ACTN1-213ENST00000554508 TCP11L2Q8N4U5 519 aa12.24□□□□□ -0.45
ACTN1-213ENST00000554508 CRB1P82279 1406 aa12.23□□□□□ -0.45
ACTN1-213ENST00000554508 USP35Q9P2H5 1018 aa12.23□□□□□ -0.45
ACTN1-213ENST00000554508 A0A1W2PP64 1363 aa12.22□□□□□ -0.45
ACTN1-213ENST00000554508 CDCA8Q53HL2 280 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms