RNA–Protein interactions for RNA: ENST00000554387.5

RGMA-205, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 2

Gene RGMA, Length 3,172 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-205ENST00000554387 ANKRD45Q5TZF3 282 aa17.06■□□□□ 0.32
RGMA-205ENST00000554387 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
RGMA-205ENST00000554387 NCLP19338 710 aaKnown RBP17.05■□□□□ 0.32
RGMA-205ENST00000554387 KLHL40Q2TBA0 621 aa17.05■□□□□ 0.32
RGMA-205ENST00000554387 BAG4O95429 457 aaKnown RBP17.05■□□□□ 0.32
RGMA-205ENST00000554387 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.05■□□□□ 0.32
RGMA-205ENST00000554387 IPO8O15397 1037 aaKnown RBP17.04■□□□□ 0.32
RGMA-205ENST00000554387 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
RGMA-205ENST00000554387 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
RGMA-205ENST00000554387 R3HCC1Q9Y3T6 440 aaKnown RBP17.03■□□□□ 0.32
RGMA-205ENST00000554387 TBC1D9Q6ZT07 1266 aa17.03■□□□□ 0.32
RGMA-205ENST00000554387 RIPK4P57078 832 aa17.03■□□□□ 0.32
RGMA-205ENST00000554387 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
RGMA-205ENST00000554387 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
RGMA-205ENST00000554387 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
RGMA-205ENST00000554387 SBNO2Q9Y2G9 1366 aa17.02■□□□□ 0.32
RGMA-205ENST00000554387 MCTP1Q6DN14 999 aa17.02■□□□□ 0.31
RGMA-205ENST00000554387 KIF3BO15066 747 aa17.01■□□□□ 0.31
RGMA-205ENST00000554387 CAVIN1Q6NZI2 390 aaKnown RBP17.01■□□□□ 0.31
RGMA-205ENST00000554387 CALD1Q05682 793 aaKnown RBP17.01■□□□□ 0.31
RGMA-205ENST00000554387 KIF16BQ96L93 1317 aa17.01■□□□□ 0.31
RGMA-205ENST00000554387 RIMBP3CA6NJZ7 1639 aa17■□□□□ 0.31
RGMA-205ENST00000554387 RIMBP3BA6NNM3 1639 aa17■□□□□ 0.31
RGMA-205ENST00000554387 RIMBP3Q9UFD9 1639 aa17■□□□□ 0.31
RGMA-205ENST00000554387 PLCH2O75038 1416 aa17■□□□□ 0.31
RGMA-205ENST00000554387 TMEM132EQ6IEE7 984 aa17■□□□□ 0.31
RGMA-205ENST00000554387 CLEC17AQ6ZS10 378 aa17■□□□□ 0.31
RGMA-205ENST00000554387 C1orf115Q9H7X2 142 aa16.99■□□□□ 0.31
RGMA-205ENST00000554387 IBTKQ9P2D0 1353 aaPredicted RBP16.99■□□□□ 0.31
RGMA-205ENST00000554387 PLEKHF1Q96S99 279 aa16.99■□□□□ 0.31
RGMA-205ENST00000554387 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
RGMA-205ENST00000554387 KIAA1210Q9ULL0 1709 aa16.98■□□□□ 0.31
RGMA-205ENST00000554387 ZNF445P59923 1031 aa16.98■□□□□ 0.31
RGMA-205ENST00000554387 TERF1P54274 439 aa16.98■□□□□ 0.31
RGMA-205ENST00000554387 XPCQ01831 940 aaPredicted RBP16.98■□□□□ 0.31
RGMA-205ENST00000554387 ZSCAN23Q3MJ62 389 aa16.98■□□□□ 0.31
RGMA-205ENST00000554387 CD109Q6YHK3 1445 aa16.98■□□□□ 0.31
RGMA-205ENST00000554387 ABCA6Q8N139 1617 aa16.98■□□□□ 0.31
RGMA-205ENST00000554387 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
RGMA-205ENST00000554387 NOS1P29475 1434 aa16.97■□□□□ 0.31
RGMA-205ENST00000554387 MAP3K4Q9Y6R4 1608 aa16.97■□□□□ 0.31
RGMA-205ENST00000554387 GCC1Q96CN9 775 aa16.97■□□□□ 0.31
RGMA-205ENST00000554387 RBSNQ9H1K0 784 aa16.97■□□□□ 0.31
RGMA-205ENST00000554387 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
RGMA-205ENST00000554387 ABCC11Q96J66 1382 aa16.97■□□□□ 0.31
RGMA-205ENST00000554387 MYOM2P54296 1465 aa16.96■□□□□ 0.31
RGMA-205ENST00000554387 HS1BP3Q53T59 392 aa16.95■□□□□ 0.3
RGMA-205ENST00000554387 PRIM1P49642 420 aaKnown RBP16.95■□□□□ 0.3
RGMA-205ENST00000554387 ZBTB7BO15156 539 aaPredicted RBP16.95■□□□□ 0.3
RGMA-205ENST00000554387 NUCB2P80303 420 aa16.95■□□□□ 0.3
RGMA-205ENST00000554387 LMBRD1Q9NUN5 540 aa16.95■□□□□ 0.3
RGMA-205ENST00000554387 UQCRHLA0A096LP55 91 aa16.94■□□□□ 0.3
RGMA-205ENST00000554387 UQCRHP07919 91 aa16.94■□□□□ 0.3
RGMA-205ENST00000554387 IL16Q14005 1332 aa16.94■□□□□ 0.3
RGMA-205ENST00000554387 CDC45O75419 566 aa16.94■□□□□ 0.3
RGMA-205ENST00000554387 PKP1Q13835 747 aa16.94■□□□□ 0.3
RGMA-205ENST00000554387 ARID3AQ99856 593 aa16.94■□□□□ 0.3
RGMA-205ENST00000554387 ADGRL1O94910 1474 aa16.94■□□□□ 0.3
RGMA-205ENST00000554387 ZNF500O60304 480 aaPredicted RBP16.93■□□□□ 0.3
RGMA-205ENST00000554387 ALDH1L2Q3SY69 923 aa16.93■□□□□ 0.3
RGMA-205ENST00000554387 MAP7D2Q96T17 732 aa16.93■□□□□ 0.3
RGMA-205ENST00000554387 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.93■□□□□ 0.3
RGMA-205ENST00000554387 PPIP5K1Q6PFW1 1433 aa16.93■□□□□ 0.3
RGMA-205ENST00000554387 PRPF40AO75400 957 aaKnown RBP16.93■□□□□ 0.3
RGMA-205ENST00000554387 GGNBP2Q9H3C7 697 aa16.93■□□□□ 0.3
RGMA-205ENST00000554387 RBM27Q9P2N5 1060 aaKnown RBP16.92■□□□□ 0.3
RGMA-205ENST00000554387 RABEP1Q15276 862 aa16.92■□□□□ 0.3
RGMA-205ENST00000554387 PDLIM2Q96JY6 352 aa16.92■□□□□ 0.3
RGMA-205ENST00000554387 C14orf93Q9H972 538 aaKnown RBP16.91■□□□□ 0.3
RGMA-205ENST00000554387 CABP2Q9NPB3 220 aa16.91■□□□□ 0.3
RGMA-205ENST00000554387 ABCC1P33527 1531 aa16.91■□□□□ 0.3
RGMA-205ENST00000554387 ADGRB2O60241 1585 aa16.91■□□□□ 0.3
RGMA-205ENST00000554387 ZCCHC11Q5TAX3 1644 aaKnown RBP16.91■□□□□ 0.3
RGMA-205ENST00000554387 SIRT2Q8IXJ6 389 aa16.91■□□□□ 0.3
RGMA-205ENST00000554387 ZKSCAN5Q9Y2L8 839 aa16.9■□□□□ 0.3
RGMA-205ENST00000554387 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
RGMA-205ENST00000554387 UHRF1BP1LA0JNW5 1464 aa16.9■□□□□ 0.3
RGMA-205ENST00000554387 TET3O43151 1660 aa16.89■□□□□ 0.3
RGMA-205ENST00000554387 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.3
RGMA-205ENST00000554387 GSPT1P15170 499 aaKnown RBP16.89■□□□□ 0.3
RGMA-205ENST00000554387 CHMP4BQ9H444 224 aaKnown RBP16.89■□□□□ 0.3
RGMA-205ENST00000554387 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.3
RGMA-205ENST00000554387 NSD2O96028 1365 aa16.89■□□□□ 0.29
RGMA-205ENST00000554387 CYP2E1P05181 493 aaPredicted RBP16.89■□□□□ 0.29
RGMA-205ENST00000554387 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
RGMA-205ENST00000554387 GPT2Q8TD30 523 aa16.89■□□□□ 0.29
RGMA-205ENST00000554387 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
RGMA-205ENST00000554387 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
RGMA-205ENST00000554387 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
RGMA-205ENST00000554387 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
RGMA-205ENST00000554387 CSPP1Q1MSJ5 1256 aa16.87■□□□□ 0.29
RGMA-205ENST00000554387 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
RGMA-205ENST00000554387 SYCE3A1L190 88 aa16.87■□□□□ 0.29
RGMA-205ENST00000554387 CHAMP1Q96JM3 812 aa16.87■□□□□ 0.29
RGMA-205ENST00000554387 NRXN1Q9ULB1 1477 aa16.86■□□□□ 0.29
RGMA-205ENST00000554387 DIAPH1O60610 1272 aaKnown RBP16.86■□□□□ 0.29
RGMA-205ENST00000554387 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
RGMA-205ENST00000554387 CWC22Q9HCG8 908 aaKnown RBP16.86■□□□□ 0.29
RGMA-205ENST00000554387 ZFYVE16Q7Z3T8 1539 aa16.85■□□□□ 0.29
RGMA-205ENST00000554387 PLEKHM2Q8IWE5 1019 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms