RNA–Protein interactions for RNA: ENST00000554359.1

ITGA7-209, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-209ENST00000554359 PAK3O75914 559 aaPredicted RBP26.27■■□□□ 1.8
ITGA7-209ENST00000554359 BRWD3Q6RI45 1802 aa26.27■■□□□ 1.8
ITGA7-209ENST00000554359 POLR3AO14802 1390 aaPredicted RBP26.25■■□□□ 1.79
ITGA7-209ENST00000554359 COL14A1Q05707 1796 aaKnown RBP26.25■■□□□ 1.79
ITGA7-209ENST00000554359 SRCAPQ6ZRS2 3230 aa26.24■■□□□ 1.79
ITGA7-209ENST00000554359 ACEP12821 1306 aa26.23■■□□□ 1.79
ITGA7-209ENST00000554359 SEPT12Q8IYM1 358 aa26.23■■□□□ 1.79
ITGA7-209ENST00000554359 BTG4Q9NY30 223 aa26.23■■□□□ 1.79
ITGA7-209ENST00000554359 CCDC61Q9Y6R9 512 aa26.23■■□□□ 1.79
ITGA7-209ENST00000554359 CENPJQ9HC77 1338 aaPredicted RBP26.22■■□□□ 1.79
ITGA7-209ENST00000554359 CCDC9Q9Y3X0 531 aaKnown RBP26.22■■□□□ 1.79
ITGA7-209ENST00000554359 PLEKHG3A1L390 1219 aa26.21■■□□□ 1.79
ITGA7-209ENST00000554359 ONECUT3O60422 494 aaPredicted RBP26.21■■□□□ 1.79
ITGA7-209ENST00000554359 QRICH2Q9H0J4 1663 aa26.21■■□□□ 1.79
ITGA7-209ENST00000554359 PHRF1Q9P1Y6 1649 aaKnown RBP26.21■■□□□ 1.79
ITGA7-209ENST00000554359 NBPF8Q3BBV2 869 aa26.2■■□□□ 1.78
ITGA7-209ENST00000554359 TRPM1Q7Z4N2 1603 aa26.2■■□□□ 1.78
ITGA7-209ENST00000554359 NUTM2GQ5VZR2 741 aa26.18■■□□□ 1.78
ITGA7-209ENST00000554359 NEUROD1Q13562 356 aa26.17■■□□□ 1.78
ITGA7-209ENST00000554359 CABP2Q9NPB3 220 aa26.17■■□□□ 1.78
ITGA7-209ENST00000554359 KIAA0232Q92628 1395 aa26.17■■□□□ 1.78
ITGA7-209ENST00000554359 PPIP5K1Q6PFW1 1433 aa26.16■■□□□ 1.78
ITGA7-209ENST00000554359 SRPK2P78362 688 aaKnown RBP26.16■■□□□ 1.78
ITGA7-209ENST00000554359 PRDM11Q9NQV5 511 aa26.15■■□□□ 1.78
ITGA7-209ENST00000554359 FAM98CQ17RN3 349 aaKnown RBP26.14■■□□□ 1.78
ITGA7-209ENST00000554359 CCDC125Q86Z20 511 aa26.14■■□□□ 1.78
ITGA7-209ENST00000554359 BLMP54132 1417 aaPredicted RBP26.14■■□□□ 1.77
ITGA7-209ENST00000554359 CHRNA2Q15822 529 aa26.13■■□□□ 1.77
ITGA7-209ENST00000554359 SPATA31A5Q5VU36 1347 aa26.13■■□□□ 1.77
ITGA7-209ENST00000554359 SPATA31A7Q8IWB4 1347 aa26.13■■□□□ 1.77
ITGA7-209ENST00000554359 NRKQ7Z2Y5 1582 aa26.12■■□□□ 1.77
ITGA7-209ENST00000554359 ZC3H6P61129 1189 aaKnown RBP26.11■■□□□ 1.77
ITGA7-209ENST00000554359 KRT27Q7Z3Y8 459 aa26.11■■□□□ 1.77
ITGA7-209ENST00000554359 USP19O94966 1318 aa26.09■■□□□ 1.77
ITGA7-209ENST00000554359 ROCK2O75116 1388 aaKnown RBP26.08■■□□□ 1.77
ITGA7-209ENST00000554359 ABTB2Q8N961 1025 aa26.08■■□□□ 1.77
ITGA7-209ENST00000554359 THSD7AQ9UPZ6 1657 aa26.08■■□□□ 1.77
ITGA7-209ENST00000554359 A0A0G2JS52 829 aa26.07■■□□□ 1.76
ITGA7-209ENST00000554359 MYT1Q01538 1121 aa26.07■■□□□ 1.76
ITGA7-209ENST00000554359 CABP1Q9NZU7 370 aa26.07■■□□□ 1.76
ITGA7-209ENST00000554359 DEFB132Q7Z7B7 95 aa26.06■■□□□ 1.76
ITGA7-209ENST00000554359 USP6P35125 1406 aa26.05■■□□□ 1.76
ITGA7-209ENST00000554359 SPATA31A1Q5TZJ5 1347 aa26.04■■□□□ 1.76
ITGA7-209ENST00000554359 LMO7Q8WWI1 1683 aa26.03■■□□□ 1.76
ITGA7-209ENST00000554359 CAMTA1Q9Y6Y1 1673 aa26.03■■□□□ 1.76
ITGA7-209ENST00000554359 STRN4Q9NRL3 753 aa26.03■■□□□ 1.76
ITGA7-209ENST00000554359 CPDO75976 1380 aa26.03■■□□□ 1.76
ITGA7-209ENST00000554359 EVC2Q86UK5 1308 aa26.02■■□□□ 1.76
ITGA7-209ENST00000554359 SSH2Q76I76 1423 aa26.02■■□□□ 1.76
ITGA7-209ENST00000554359 BRD4O60885 1362 aaPredicted RBP26.01■■□□□ 1.75
ITGA7-209ENST00000554359 FAM182BQ5T319 152 aa26.01■■□□□ 1.75
ITGA7-209ENST00000554359 ZRANB1Q9UGI0 708 aa26.01■■□□□ 1.75
ITGA7-209ENST00000554359 GCP02774 474 aa25.99■■□□□ 1.75
ITGA7-209ENST00000554359 NLRP13Q86W25 1043 aa25.99■■□□□ 1.75
ITGA7-209ENST00000554359 PIK3C2AO00443 1686 aa25.99■■□□□ 1.75
ITGA7-209ENST00000554359 SLIT3O75094 1523 aa25.97■■□□□ 1.75
ITGA7-209ENST00000554359 SF3B2Q13435 895 aaKnown RBP25.96■■□□□ 1.75
ITGA7-209ENST00000554359 LARP1Q6PKG0 1096 aaKnown RBP25.96■■□□□ 1.75
ITGA7-209ENST00000554359 USP35Q9P2H5 1018 aa25.94■■□□□ 1.74
ITGA7-209ENST00000554359 AKAP12Q02952 1782 aa25.94■■□□□ 1.74
ITGA7-209ENST00000554359 EVA1CP58658 441 aa25.93■■□□□ 1.74
ITGA7-209ENST00000554359 NLRP6P59044 892 aa25.93■■□□□ 1.74
ITGA7-209ENST00000554359 COL5A2P05997 1499 aaPredicted RBP25.92■■□□□ 1.74
ITGA7-209ENST00000554359 SBNO2Q9Y2G9 1366 aa25.91■■□□□ 1.74
ITGA7-209ENST00000554359 RGPD1P0DJD0 1748 aa25.91■■□□□ 1.74
ITGA7-209ENST00000554359 TTC21BQ7Z4L5 1316 aa25.9■■□□□ 1.74
ITGA7-209ENST00000554359 CPSF1Q10570 1443 aaKnown RBP25.9■■□□□ 1.74
ITGA7-209ENST00000554359 BARGINQ6ZT62 677 aa25.9■■□□□ 1.74
ITGA7-209ENST00000554359 CARD11Q9BXL7 1154 aa25.9■■□□□ 1.74
ITGA7-209ENST00000554359 TNS1Q9HBL0 1735 aaKnown RBP25.9■■□□□ 1.74
ITGA7-209ENST00000554359 TONSLQ96HA7 1378 aa25.89■■□□□ 1.74
ITGA7-209ENST00000554359 COL18A1P39060 1754 aa25.87■■□□□ 1.73
ITGA7-209ENST00000554359 AATKQ6ZMQ8 1374 aa25.87■■□□□ 1.73
ITGA7-209ENST00000554359 ZBTB7CA1YPR0 619 aa25.87■■□□□ 1.73
ITGA7-209ENST00000554359 BAG6P46379 1132 aa25.87■■□□□ 1.73
ITGA7-209ENST00000554359 TCP11L2Q8N4U5 519 aa25.87■■□□□ 1.73
ITGA7-209ENST00000554359 ZNF692Q9BU19 519 aaPredicted RBP25.86■■□□□ 1.73
ITGA7-209ENST00000554359 EN1Q05925 392 aaPredicted RBP25.85■■□□□ 1.73
ITGA7-209ENST00000554359 DISP2A7MBM2 1401 aa25.85■■□□□ 1.73
ITGA7-209ENST00000554359 MON2Q7Z3U7 1717 aa25.85■■□□□ 1.73
ITGA7-209ENST00000554359 CD163L1Q9NR16 1453 aa25.84■■□□□ 1.73
ITGA7-209ENST00000554359 KTN1Q86UP2 1357 aaKnown RBP25.83■■□□□ 1.73
ITGA7-209ENST00000554359 CRB1P82279 1406 aa25.83■■□□□ 1.73
ITGA7-209ENST00000554359 FAM196AQ6ZSG2 479 aa25.82■■□□□ 1.72
ITGA7-209ENST00000554359 AXIN2Q9Y2T1 843 aa25.82■■□□□ 1.72
ITGA7-209ENST00000554359 NFAT5O94916 1531 aa25.82■■□□□ 1.72
ITGA7-209ENST00000554359 TTC21AQ8NDW8 1320 aa25.82■■□□□ 1.72
ITGA7-209ENST00000554359 PARP4Q9UKK3 1724 aaKnown RBP25.81■■□□□ 1.72
ITGA7-209ENST00000554359 TRIM37O94972 964 aa25.81■■□□□ 1.72
ITGA7-209ENST00000554359 TRIM26Q12899 539 aaPredicted RBP25.81■■□□□ 1.72
ITGA7-209ENST00000554359 THRAP3Q9Y2W1 955 aaKnown RBP25.81■■□□□ 1.72
ITGA7-209ENST00000554359 ARHGEF25Q86VW2 580 aa25.8■■□□□ 1.72
ITGA7-209ENST00000554359 SOX12O15370 315 aa25.79■■□□□ 1.72
ITGA7-209ENST00000554359 PDE3BQ13370 1112 aa25.79■■□□□ 1.72
ITGA7-209ENST00000554359 PSDA5PKW4 1024 aaPredicted RBP25.77■■□□□ 1.72
ITGA7-209ENST00000554359 EZH2Q15910 746 aaKnown RBP25.76■■□□□ 1.71
ITGA7-209ENST00000554359 KCNH5Q8NCM2 988 aa25.76■■□□□ 1.71
ITGA7-209ENST00000554359 LRRC37A3O60309 1634 aa25.76■■□□□ 1.71
ITGA7-209ENST00000554359 RGPD5Q99666 1765 aa25.76■■□□□ 1.71
ITGA7-209ENST00000554359 USP54Q70EL1 1684 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms