RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 TECPR2O15040 1411 aa19.12■□□□□ 0.65
PPP4R3A-201ENST00000554308 BACH2Q9BYV9 841 aa19.11■□□□□ 0.65
PPP4R3A-201ENST00000554308 NME9Q86XW9 330 aa19.1■□□□□ 0.65
PPP4R3A-201ENST00000554308 TCP11L2Q8N4U5 519 aa19.1■□□□□ 0.65
PPP4R3A-201ENST00000554308 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
PPP4R3A-201ENST00000554308 DMRT2Q9Y5R5 561 aa19.1■□□□□ 0.65
PPP4R3A-201ENST00000554308 PRR36Q9H6K5 1346 aa19.1■□□□□ 0.65
PPP4R3A-201ENST00000554308 PTPRUQ92729 1446 aa19.1■□□□□ 0.65
PPP4R3A-201ENST00000554308 RUNDC1Q96C34 613 aa19.1■□□□□ 0.65
PPP4R3A-201ENST00000554308 TBX22Q9Y458 520 aa19.1■□□□□ 0.65
PPP4R3A-201ENST00000554308 SLFN5Q08AF3 891 aa19.08■□□□□ 0.65
PPP4R3A-201ENST00000554308 WWC1Q8IX03 1113 aa19.07■□□□□ 0.64
PPP4R3A-201ENST00000554308 SLIT1O75093 1534 aa19.07■□□□□ 0.64
PPP4R3A-201ENST00000554308 IL27Q8NEV9 243 aa19.07■□□□□ 0.64
PPP4R3A-201ENST00000554308 ARHGAP23Q9P227 1491 aa19.07■□□□□ 0.64
PPP4R3A-201ENST00000554308 NEFMP07197 916 aa19.06■□□□□ 0.64
PPP4R3A-201ENST00000554308 ATP7BP35670 1465 aa19.06■□□□□ 0.64
PPP4R3A-201ENST00000554308 MED14O60244 1454 aa19.06■□□□□ 0.64
PPP4R3A-201ENST00000554308 CPS1P31327 1500 aa19.06■□□□□ 0.64
PPP4R3A-201ENST00000554308 CRBNQ96SW2 442 aa19.05■□□□□ 0.64
PPP4R3A-201ENST00000554308 CPSF1Q10570 1443 aaKnown RBP19.05■□□□□ 0.64
PPP4R3A-201ENST00000554308 SHPRHQ149N8 1683 aa19.04■□□□□ 0.64
PPP4R3A-201ENST00000554308 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
PPP4R3A-201ENST00000554308 DIAPH1O60610 1272 aaKnown RBP19.03■□□□□ 0.64
PPP4R3A-201ENST00000554308 KCNA6P17658 529 aa19.03■□□□□ 0.64
PPP4R3A-201ENST00000554308 PMFBP1Q8TBY8 1022 aa19.03■□□□□ 0.64
PPP4R3A-201ENST00000554308 RIMS1Q86UR5 1692 aaKnown RBP19.03■□□□□ 0.64
PPP4R3A-201ENST00000554308 ACEP12821 1306 aa19.02■□□□□ 0.64
PPP4R3A-201ENST00000554308 E9PSI1 815 aa19.02■□□□□ 0.64
PPP4R3A-201ENST00000554308 ANKLE2Q86XL3 938 aa19.02■□□□□ 0.64
PPP4R3A-201ENST00000554308 RBM33Q96EV2 1170 aaKnown RBP19.02■□□□□ 0.64
PPP4R3A-201ENST00000554308 COG3Q96JB2 828 aa19.02■□□□□ 0.64
PPP4R3A-201ENST00000554308 ZNF692Q9BU19 519 aaPredicted RBP19.02■□□□□ 0.64
PPP4R3A-201ENST00000554308 EMILIN1Q9Y6C2 1016 aa19.02■□□□□ 0.64
PPP4R3A-201ENST00000554308 EDC4Q6P2E9 1401 aaKnown RBP19.02■□□□□ 0.64
PPP4R3A-201ENST00000554308 C20orf194Q5TEA3 1177 aa19.02■□□□□ 0.63
PPP4R3A-201ENST00000554308 KNDC1Q76NI1 1749 aa19.02■□□□□ 0.63
PPP4R3A-201ENST00000554308 MS4A1P11836 297 aa19.01■□□□□ 0.63
PPP4R3A-201ENST00000554308 RTN4Q9NQC3 1192 aaKnown RBP19.01■□□□□ 0.63
PPP4R3A-201ENST00000554308 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.01■□□□□ 0.63
PPP4R3A-201ENST00000554308 TRMT2AQ8IZ69 625 aaKnown RBP19.01■□□□□ 0.63
PPP4R3A-201ENST00000554308 NGEFQ8N5V2 710 aa19.01■□□□□ 0.63
PPP4R3A-201ENST00000554308 RRS1Q15050 365 aaKnown RBP19■□□□□ 0.63
PPP4R3A-201ENST00000554308 CEP170BQ9Y4F5 1589 aaPredicted RBP18.99■□□□□ 0.63
PPP4R3A-201ENST00000554308 SOX12O15370 315 aa18.98■□□□□ 0.63
PPP4R3A-201ENST00000554308 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
PPP4R3A-201ENST00000554308 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
PPP4R3A-201ENST00000554308 SLC4A3P48751 1232 aa18.96■□□□□ 0.63
PPP4R3A-201ENST00000554308 PLEKHF1Q96S99 279 aa18.96■□□□□ 0.63
PPP4R3A-201ENST00000554308 ANO8Q9HCE9 1232 aaPredicted RBP18.96■□□□□ 0.63
PPP4R3A-201ENST00000554308 BCAR3O75815 825 aa18.96■□□□□ 0.63
PPP4R3A-201ENST00000554308 NGDNQ8NEJ9 315 aaKnown RBP18.96■□□□□ 0.63
PPP4R3A-201ENST00000554308 PNPLA6Q8IY17 1366 aa18.95■□□□□ 0.62
PPP4R3A-201ENST00000554308 HMOX1P09601 288 aa18.95■□□□□ 0.62
PPP4R3A-201ENST00000554308 CDC42BPGQ6DT37 1551 aa18.95■□□□□ 0.62
PPP4R3A-201ENST00000554308 TTC21BQ7Z4L5 1316 aa18.95■□□□□ 0.62
PPP4R3A-201ENST00000554308 KIF20BQ96Q89 1820 aa18.94■□□□□ 0.62
PPP4R3A-201ENST00000554308 COL3A1P02461 1466 aaPredicted RBP18.94■□□□□ 0.62
PPP4R3A-201ENST00000554308 NKTRP30414 1462 aaKnown RBP18.94■□□□□ 0.62
PPP4R3A-201ENST00000554308 TMPOP42166 694 aaKnown RBP18.93■□□□□ 0.62
PPP4R3A-201ENST00000554308 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
PPP4R3A-201ENST00000554308 ANKRD26Q9UPS8 1709 aa18.93■□□□□ 0.62
PPP4R3A-201ENST00000554308 PTCH1Q13635 1447 aa18.92■□□□□ 0.62
PPP4R3A-201ENST00000554308 WDR63Q8IWG1 891 aa18.92■□□□□ 0.62
PPP4R3A-201ENST00000554308 IQSEC2Q5JU85 1478 aa18.92■□□□□ 0.62
PPP4R3A-201ENST00000554308 PRKAR2BP31323 418 aa18.91■□□□□ 0.62
PPP4R3A-201ENST00000554308 RIPK4P57078 832 aa18.91■□□□□ 0.62
PPP4R3A-201ENST00000554308 CCDC27Q2M243 656 aa18.91■□□□□ 0.62
PPP4R3A-201ENST00000554308 USP35Q9P2H5 1018 aa18.9■□□□□ 0.62
PPP4R3A-201ENST00000554308 FCHSD2O94868 740 aa18.9■□□□□ 0.62
PPP4R3A-201ENST00000554308 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.9■□□□□ 0.62
PPP4R3A-201ENST00000554308 ADGRB2O60241 1585 aa18.89■□□□□ 0.62
PPP4R3A-201ENST00000554308 ADAMTSL3P82987 1691 aa18.89■□□□□ 0.61
PPP4R3A-201ENST00000554308 USP6P35125 1406 aa18.89■□□□□ 0.61
PPP4R3A-201ENST00000554308 TRIM35Q9UPQ4 493 aa18.89■□□□□ 0.61
PPP4R3A-201ENST00000554308 MAP2P11137 1827 aaKnown RBP18.88■□□□□ 0.61
PPP4R3A-201ENST00000554308 KDM2BQ8NHM5 1336 aa18.88■□□□□ 0.61
PPP4R3A-201ENST00000554308 IL13P35225 146 aa18.88■□□□□ 0.61
PPP4R3A-201ENST00000554308 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
PPP4R3A-201ENST00000554308 PNNQ9H307 717 aaKnown RBP18.88■□□□□ 0.61
PPP4R3A-201ENST00000554308 PHACTR3Q96KR7 559 aa18.88■□□□□ 0.61
PPP4R3A-201ENST00000554308 RSPH6AQ9H0K4 717 aa18.88■□□□□ 0.61
PPP4R3A-201ENST00000554308 DIP2AQ14689 1571 aa18.87■□□□□ 0.61
PPP4R3A-201ENST00000554308 NUTM2GQ5VZR2 741 aa18.87■□□□□ 0.61
PPP4R3A-201ENST00000554308 C14orf37Q86TY3 774 aa18.87■□□□□ 0.61
PPP4R3A-201ENST00000554308 BCL2L13Q9BXK5 485 aa18.87■□□□□ 0.61
PPP4R3A-201ENST00000554308 AATKQ6ZMQ8 1374 aa18.86■□□□□ 0.61
PPP4R3A-201ENST00000554308 PIK3R4Q99570 1358 aa18.86■□□□□ 0.61
PPP4R3A-201ENST00000554308 FRAT1Q92837 279 aaPredicted RBP18.86■□□□□ 0.61
PPP4R3A-201ENST00000554308 MYH16Q9H6N6 1097 aa18.86■□□□□ 0.61
PPP4R3A-201ENST00000554308 SETD1BQ9UPS6 1966 aaKnown RBP18.86■□□□□ 0.61
PPP4R3A-201ENST00000554308 ITSN1Q15811 1721 aa18.86■□□□□ 0.61
PPP4R3A-201ENST00000554308 MON2Q7Z3U7 1717 aa18.86■□□□□ 0.61
PPP4R3A-201ENST00000554308 CANXP27824 592 aaKnown RBP18.85■□□□□ 0.61
PPP4R3A-201ENST00000554308 DDRGK1Q96HY6 314 aa18.84■□□□□ 0.61
PPP4R3A-201ENST00000554308 AKAP12Q02952 1782 aa18.84■□□□□ 0.61
PPP4R3A-201ENST00000554308 NFKBIBQ15653 356 aa18.83■□□□□ 0.61
PPP4R3A-201ENST00000554308 HSP90AB2PQ58FF8 381 aa18.83■□□□□ 0.61
PPP4R3A-201ENST00000554308 BRPF3Q9ULD4 1205 aa18.82■□□□□ 0.6
PPP4R3A-201ENST00000554308 XRN1Q8IZH2 1706 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms