RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 TSPYL6Q8N831 410 aa14.3□□□□□ -0.12
PTPN21-205ENST00000554270 TRPM2O94759 1503 aa14.29□□□□□ -0.12
PTPN21-205ENST00000554270 INSRP06213 1382 aa14.29□□□□□ -0.12
PTPN21-205ENST00000554270 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
PTPN21-205ENST00000554270 NPC1L1Q9UHC9 1359 aa14.28□□□□□ -0.12
PTPN21-205ENST00000554270 GOLGA6L22H0YM25 854 aa14.28□□□□□ -0.12
PTPN21-205ENST00000554270 MIS18AQ9NYP9 233 aa14.28□□□□□ -0.12
PTPN21-205ENST00000554270 MADDQ8WXG6 1647 aa14.28□□□□□ -0.12
PTPN21-205ENST00000554270 ZFYVE16Q7Z3T8 1539 aa14.28□□□□□ -0.12
PTPN21-205ENST00000554270 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.12
PTPN21-205ENST00000554270 PLXNC1O60486 1568 aa14.27□□□□□ -0.12
PTPN21-205ENST00000554270 USP19O94966 1318 aa14.27□□□□□ -0.12
PTPN21-205ENST00000554270 LTV1Q96GA3 475 aaPredicted RBP14.27□□□□□ -0.12
PTPN21-205ENST00000554270 KRT24Q2M2I5 525 aa14.27□□□□□ -0.13
PTPN21-205ENST00000554270 COG3Q96JB2 828 aa14.26□□□□□ -0.13
PTPN21-205ENST00000554270 NUTM2GQ5VZR2 741 aa14.26□□□□□ -0.13
PTPN21-205ENST00000554270 RPGRIP1LQ68CZ1 1315 aa14.26□□□□□ -0.13
PTPN21-205ENST00000554270 ANKRD36BQ8N2N9 1353 aa14.25□□□□□ -0.13
PTPN21-205ENST00000554270 TWISTNBQ3B726 338 aaPredicted RBP14.25□□□□□ -0.13
PTPN21-205ENST00000554270 GBP4Q96PP9 640 aa14.25□□□□□ -0.13
PTPN21-205ENST00000554270 SLC52A1Q9NWF4 448 aa14.25□□□□□ -0.13
PTPN21-205ENST00000554270 SYNMO15061 1565 aa14.25□□□□□ -0.13
PTPN21-205ENST00000554270 KIF16BQ96L93 1317 aa14.25□□□□□ -0.13
PTPN21-205ENST00000554270 DDX49Q9Y6V7 483 aaKnown RBP14.25□□□□□ -0.13
PTPN21-205ENST00000554270 ATAD2Q6PL18 1390 aa14.24□□□□□ -0.13
PTPN21-205ENST00000554270 KDM5AP29375 1690 aaKnown RBP14.24□□□□□ -0.13
PTPN21-205ENST00000554270 XRCC6P12956 609 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPN21-205ENST00000554270 SULT6B1Q6IMI4 303 aa14.24□□□□□ -0.13
PTPN21-205ENST00000554270 PKNOX2Q96KN3 472 aa14.24□□□□□ -0.13
PTPN21-205ENST00000554270 PODXL2Q9NZ53 605 aa14.24□□□□□ -0.13
PTPN21-205ENST00000554270 MCM10Q7L590 875 aa14.23□□□□□ -0.13
PTPN21-205ENST00000554270 CHD1LQ86WJ1 897 aa14.23□□□□□ -0.13
PTPN21-205ENST00000554270 POLKQ9UBT6 870 aa14.23□□□□□ -0.13
PTPN21-205ENST00000554270 ZNF428Q96B54 188 aa14.23□□□□□ -0.13
PTPN21-205ENST00000554270 ZNF518AQ6AHZ1 1483 aa14.22□□□□□ -0.13
PTPN21-205ENST00000554270 RRAGDQ9NQL2 400 aaPredicted RBP14.22□□□□□ -0.13
PTPN21-205ENST00000554270 FAM43AQ8N2R8 423 aa14.22□□□□□ -0.13
PTPN21-205ENST00000554270 AEBP1Q8IUX7 1158 aa14.21□□□□□ -0.13
PTPN21-205ENST00000554270 NINLQ9Y2I6 1382 aa14.21□□□□□ -0.14
PTPN21-205ENST00000554270 SLC26A8Q96RN1 970 aa14.21□□□□□ -0.14
PTPN21-205ENST00000554270 RSPH6AQ9H0K4 717 aa14.21□□□□□ -0.14
PTPN21-205ENST00000554270 DDX11L8A8MPP1 907 aa14.2□□□□□ -0.14
PTPN21-205ENST00000554270 SMARCA5O60264 1052 aaPredicted RBP14.2□□□□□ -0.14
PTPN21-205ENST00000554270 FCHSD2O94868 740 aa14.2□□□□□ -0.14
PTPN21-205ENST00000554270 C8orf58Q8NAV2 365 aa14.2□□□□□ -0.14
PTPN21-205ENST00000554270 PLCB2Q00722 1185 aa14.2□□□□□ -0.14
PTPN21-205ENST00000554270 CCDC27Q2M243 656 aa14.2□□□□□ -0.14
PTPN21-205ENST00000554270 MBIPQ9NS73 344 aa14.2□□□□□ -0.14
PTPN21-205ENST00000554270 GNAI1P63096 354 aa14.2□□□□□ -0.14
PTPN21-205ENST00000554270 MCTP1Q6DN14 999 aa14.2□□□□□ -0.14
PTPN21-205ENST00000554270 NFE2L2Q16236 605 aa14.19□□□□□ -0.14
PTPN21-205ENST00000554270 SPHKAPQ2M3C7 1700 aa14.19□□□□□ -0.14
PTPN21-205ENST00000554270 C16orf71Q8IYS4 520 aaPredicted RBP14.19□□□□□ -0.14
PTPN21-205ENST00000554270 UBE2Q2Q8WVN8 375 aa14.19□□□□□ -0.14
PTPN21-205ENST00000554270 TNPO1Q92973 898 aaKnown RBP14.19□□□□□ -0.14
PTPN21-205ENST00000554270 NUDT16Q96DE0 195 aaKnown RBP14.19□□□□□ -0.14
PTPN21-205ENST00000554270 PLEKHF1Q96S99 279 aa14.19□□□□□ -0.14
PTPN21-205ENST00000554270 ZBTB40Q9NUA8 1239 aa14.19□□□□□ -0.14
PTPN21-205ENST00000554270 ABCA6Q8N139 1617 aa14.18□□□□□ -0.14
PTPN21-205ENST00000554270 MPNDQ8N594 471 aa14.18□□□□□ -0.14
PTPN21-205ENST00000554270 LMOD2Q6P5Q4 547 aa14.18□□□□□ -0.14
PTPN21-205ENST00000554270 RTF1Q92541 710 aaKnown RBP14.18□□□□□ -0.14
PTPN21-205ENST00000554270 GRPEL1Q9HAV7 217 aa14.18□□□□□ -0.14
PTPN21-205ENST00000554270 SSFA2P28290 1259 aa14.17□□□□□ -0.14
PTPN21-205ENST00000554270 CALD1Q05682 793 aaKnown RBP14.17□□□□□ -0.14
PTPN21-205ENST00000554270 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
PTPN21-205ENST00000554270 CASC1Q6TDU7 716 aa14.17□□□□□ -0.14
PTPN21-205ENST00000554270 MAP3K4Q9Y6R4 1608 aa14.16□□□□□ -0.14
PTPN21-205ENST00000554270 NGDNQ8NEJ9 315 aaKnown RBP14.16□□□□□ -0.14
PTPN21-205ENST00000554270 YEATS2Q9ULM3 1422 aa14.16□□□□□ -0.14
PTPN21-205ENST00000554270 F6X3S4 739 aa14.16□□□□□ -0.14
PTPN21-205ENST00000554270 GLIPR1L2Q4G1C9 344 aa14.16□□□□□ -0.14
PTPN21-205ENST00000554270 TSHZ3Q63HK5 1081 aa14.16□□□□□ -0.14
PTPN21-205ENST00000554270 AAMPQ13685 434 aa14.16□□□□□ -0.14
PTPN21-205ENST00000554270 VAMP4O75379 141 aa14.15□□□□□ -0.14
PTPN21-205ENST00000554270 PTMAP06454 111 aaKnown RBP14.15□□□□□ -0.14
PTPN21-205ENST00000554270 RILPL2Q969X0 211 aa14.15□□□□□ -0.14
PTPN21-205ENST00000554270 MRE11P49959 708 aa14.15□□□□□ -0.14
PTPN21-205ENST00000554270 CAVIN1Q6NZI2 390 aaKnown RBP14.15□□□□□ -0.14
PTPN21-205ENST00000554270 RBM33Q96EV2 1170 aaKnown RBP14.15□□□□□ -0.14
PTPN21-205ENST00000554270 UHRF1BP1LA0JNW5 1464 aa14.15□□□□□ -0.14
PTPN21-205ENST00000554270 AMPHP49418 695 aa14.15□□□□□ -0.14
PTPN21-205ENST00000554270 TBC1D9Q6ZT07 1266 aa14.15□□□□□ -0.14
PTPN21-205ENST00000554270 TET3O43151 1660 aa14.15□□□□□ -0.14
PTPN21-205ENST00000554270 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
PTPN21-205ENST00000554270 HDAC1Q13547 482 aaPredicted RBP14.14□□□□□ -0.15
PTPN21-205ENST00000554270 SBNO2Q9Y2G9 1366 aa14.14□□□□□ -0.15
PTPN21-205ENST00000554270 IQGAP1P46940 1657 aa14.14□□□□□ -0.15
PTPN21-205ENST00000554270 MSNP26038 577 aaKnown RBP14.14□□□□□ -0.15
PTPN21-205ENST00000554270 HSP90AB2PQ58FF8 381 aa14.14□□□□□ -0.15
PTPN21-205ENST00000554270 RNF214Q8ND24 703 aa14.14□□□□□ -0.15
PTPN21-205ENST00000554270 OTUD7AQ8TE49 926 aaPredicted RBP14.14□□□□□ -0.15
PTPN21-205ENST00000554270 PHF23Q9BUL5 403 aaPredicted RBP14.14□□□□□ -0.15
PTPN21-205ENST00000554270 CHMP4BQ9H444 224 aaKnown RBP14.14□□□□□ -0.15
PTPN21-205ENST00000554270 CT47B1P0C2W7 299 aaPredicted RBP14.13□□□□□ -0.15
PTPN21-205ENST00000554270 CEBPAP49715 358 aaPredicted RBP14.13□□□□□ -0.15
PTPN21-205ENST00000554270 SMC5Q8IY18 1101 aa14.13□□□□□ -0.15
PTPN21-205ENST00000554270 ANTXR1Q9H6X2 564 aa14.13□□□□□ -0.15
PTPN21-205ENST00000554270 MYOM2P54296 1465 aa14.13□□□□□ -0.15
PTPN21-205ENST00000554270 NUCB1Q02818 461 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms