RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 VIRMAQ69YN4 1812 aaKnown RBP9.42□□□□□ -0.9
LINC00517-202ENST00000554257 CDCA8Q53HL2 280 aa9.42□□□□□ -0.9
LINC00517-202ENST00000554257 CCDC61Q9Y6R9 512 aa9.42□□□□□ -0.9
LINC00517-202ENST00000554257 PANK3Q9H999 370 aa9.41□□□□□ -0.9
LINC00517-202ENST00000554257 PLCH1Q4KWH8 1693 aa9.41□□□□□ -0.9
LINC00517-202ENST00000554257 ABCC6O95255 1503 aa9.41□□□□□ -0.9
LINC00517-202ENST00000554257 CABP1Q9NZU7 370 aa9.41□□□□□ -0.9
LINC00517-202ENST00000554257 FAM208AQ9UK61 1670 aaKnown RBP9.41□□□□□ -0.9
LINC00517-202ENST00000554257 ACEP12821 1306 aa9.41□□□□□ -0.9
LINC00517-202ENST00000554257 NSD2O96028 1365 aa9.4□□□□□ -0.9
LINC00517-202ENST00000554257 DDX10Q13206 875 aaKnown RBP9.4□□□□□ -0.9
LINC00517-202ENST00000554257 AEBP2Q6ZN18 517 aaPredicted RBP9.4□□□□□ -0.91
LINC00517-202ENST00000554257 SBNO1A3KN83 1393 aa9.39□□□□□ -0.91
LINC00517-202ENST00000554257 BRINP3Q76B58 766 aa9.39□□□□□ -0.91
LINC00517-202ENST00000554257 ORAI2Q96SN7 254 aa9.39□□□□□ -0.91
LINC00517-202ENST00000554257 SHANK3Q9BYB0 1731 aa9.39□□□□□ -0.91
LINC00517-202ENST00000554257 SRPK2P78362 688 aaKnown RBP9.39□□□□□ -0.91
LINC00517-202ENST00000554257 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.38□□□□□ -0.91
LINC00517-202ENST00000554257 SOS2Q07890 1332 aaPredicted RBP9.38□□□□□ -0.91
LINC00517-202ENST00000554257 KTN1Q86UP2 1357 aaKnown RBP9.38□□□□□ -0.91
LINC00517-202ENST00000554257 TNS3Q68CZ2 1445 aa9.38□□□□□ -0.91
LINC00517-202ENST00000554257 NWD2Q9ULI1 1742 aa9.38□□□□□ -0.91
LINC00517-202ENST00000554257 CADPS2Q86UW7 1296 aa9.37□□□□□ -0.91
LINC00517-202ENST00000554257 USP19O94966 1318 aa9.37□□□□□ -0.91
LINC00517-202ENST00000554257 FYB1O15117 783 aa9.36□□□□□ -0.91
LINC00517-202ENST00000554257 PHF8Q9UPP1 1060 aa9.36□□□□□ -0.91
LINC00517-202ENST00000554257 DLG5Q8TDM6 1919 aa9.36□□□□□ -0.91
LINC00517-202ENST00000554257 SLAIN2Q9P270 581 aa9.36□□□□□ -0.91
LINC00517-202ENST00000554257 TTC21BQ7Z4L5 1316 aa9.36□□□□□ -0.91
LINC00517-202ENST00000554257 INSRP06213 1382 aa9.36□□□□□ -0.91
LINC00517-202ENST00000554257 COL14A1Q05707 1796 aaKnown RBP9.36□□□□□ -0.91
LINC00517-202ENST00000554257 SCAF1Q9H7N4 1312 aaKnown RBP9.36□□□□□ -0.91
LINC00517-202ENST00000554257 AATKQ6ZMQ8 1374 aa9.35□□□□□ -0.91
LINC00517-202ENST00000554257 PNPLA6Q8IY17 1366 aa9.35□□□□□ -0.91
LINC00517-202ENST00000554257 TTC21AQ8NDW8 1320 aa9.35□□□□□ -0.91
LINC00517-202ENST00000554257 PRKRIP1Q9H875 184 aaPredicted RBP9.35□□□□□ -0.91
LINC00517-202ENST00000554257 CDK12Q9NYV4 1490 aaPredicted RBP9.35□□□□□ -0.91
LINC00517-202ENST00000554257 CERKQ8TCT0 537 aa9.35□□□□□ -0.91
LINC00517-202ENST00000554257 ZNF692Q9BU19 519 aaPredicted RBP9.35□□□□□ -0.91
LINC00517-202ENST00000554257 NCAPD2Q15021 1401 aa9.34□□□□□ -0.91
LINC00517-202ENST00000554257 DIEXFQ68CQ4 756 aaKnown RBP9.34□□□□□ -0.91
LINC00517-202ENST00000554257 PMFBP1Q8TBY8 1022 aa9.34□□□□□ -0.91
LINC00517-202ENST00000554257 NUTM2FA1L443 756 aa9.33□□□□□ -0.92
LINC00517-202ENST00000554257 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
LINC00517-202ENST00000554257 PKD1L3Q7Z443 1732 aa9.33□□□□□ -0.92
LINC00517-202ENST00000554257 ATF3P18847 181 aa9.33□□□□□ -0.92
LINC00517-202ENST00000554257 DDX17Q92841 729 aaKnown RBP9.33□□□□□ -0.92
LINC00517-202ENST00000554257 TERF2IPQ9NYB0 399 aa9.33□□□□□ -0.92
LINC00517-202ENST00000554257 ADAMTS7Q9UKP4 1686 aa9.33□□□□□ -0.92
LINC00517-202ENST00000554257 SPATA31A3Q5VYP0 1347 aa9.32□□□□□ -0.92
LINC00517-202ENST00000554257 NME9Q86XW9 330 aa9.32□□□□□ -0.92
LINC00517-202ENST00000554257 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
LINC00517-202ENST00000554257 CGNL1Q0VF96 1302 aa9.31□□□□□ -0.92
LINC00517-202ENST00000554257 CCDC184Q52MB2 194 aa9.31□□□□□ -0.92
LINC00517-202ENST00000554257 MIER1Q8N108 512 aa9.31□□□□□ -0.92
LINC00517-202ENST00000554257 TMC1Q8TDI8 760 aa9.31□□□□□ -0.92
LINC00517-202ENST00000554257 LRP6O75581 1613 aa9.31□□□□□ -0.92
LINC00517-202ENST00000554257 HDGFL2Q7Z4V5 671 aaPredicted RBP9.3□□□□□ -0.92
LINC00517-202ENST00000554257 SIPA1L3O60292 1781 aaPredicted RBP9.3□□□□□ -0.92
LINC00517-202ENST00000554257 NPHP3Q7Z494 1330 aa9.3□□□□□ -0.92
LINC00517-202ENST00000554257 LRRC37A3O60309 1634 aa9.29□□□□□ -0.92
LINC00517-202ENST00000554257 CPDO75976 1380 aa9.29□□□□□ -0.92
LINC00517-202ENST00000554257 PARP4Q9UKK3 1724 aaKnown RBP9.29□□□□□ -0.92
LINC00517-202ENST00000554257 KRT28Q7Z3Y7 464 aa9.29□□□□□ -0.92
LINC00517-202ENST00000554257 MYBBP1AQ9BQG0 1328 aaKnown RBP9.29□□□□□ -0.92
LINC00517-202ENST00000554257 FOXO3O43524 673 aa9.28□□□□□ -0.92
LINC00517-202ENST00000554257 PPP2R1AP30153 589 aa9.28□□□□□ -0.92
LINC00517-202ENST00000554257 RALBP1Q15311 655 aa9.28□□□□□ -0.92
LINC00517-202ENST00000554257 BLMP54132 1417 aaPredicted RBP9.28□□□□□ -0.92
LINC00517-202ENST00000554257 RTL1A6NKG5 1358 aa9.27□□□□□ -0.92
LINC00517-202ENST00000554257 ARHGEF10O15013 1369 aa9.27□□□□□ -0.92
LINC00517-202ENST00000554257 KIF24Q5T7B8 1368 aa9.27□□□□□ -0.92
LINC00517-202ENST00000554257 C14orf37Q86TY3 774 aa9.27□□□□□ -0.93
LINC00517-202ENST00000554257 POLR3GLQ9BT43 218 aa9.27□□□□□ -0.93
LINC00517-202ENST00000554257 GGNBP2Q9H3C7 697 aa9.27□□□□□ -0.93
LINC00517-202ENST00000554257 KNSTRNQ9Y448 316 aa9.27□□□□□ -0.93
LINC00517-202ENST00000554257 CCER2I3L3R5 266 aa9.26□□□□□ -0.93
LINC00517-202ENST00000554257 CC2D1BQ5T0F9 858 aaKnown RBP9.26□□□□□ -0.93
LINC00517-202ENST00000554257 THSD7AQ9UPZ6 1657 aa9.26□□□□□ -0.93
LINC00517-202ENST00000554257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.26□□□□□ -0.93
LINC00517-202ENST00000554257 NGDNQ8NEJ9 315 aaKnown RBP9.26□□□□□ -0.93
LINC00517-202ENST00000554257 POLKQ9UBT6 870 aa9.26□□□□□ -0.93
LINC00517-202ENST00000554257 XPCQ01831 940 aaPredicted RBP9.25□□□□□ -0.93
LINC00517-202ENST00000554257 FBLN1P23142 703 aa9.25□□□□□ -0.93
LINC00517-202ENST00000554257 SCN11AQ9UI33 1791 aa9.25□□□□□ -0.93
LINC00517-202ENST00000554257 SLIT2O94813 1529 aa9.25□□□□□ -0.93
LINC00517-202ENST00000554257 TOGARAM1Q9Y4F4 1720 aa9.24□□□□□ -0.93
LINC00517-202ENST00000554257 COL5A2P05997 1499 aaPredicted RBP9.24□□□□□ -0.93
LINC00517-202ENST00000554257 TOM1O60784 492 aa9.24□□□□□ -0.93
LINC00517-202ENST00000554257 PSME1Q06323 249 aa9.23□□□□□ -0.93
LINC00517-202ENST00000554257 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
LINC00517-202ENST00000554257 MAP3K19Q56UN5 1328 aa9.23□□□□□ -0.93
LINC00517-202ENST00000554257 ARHGEF25Q86VW2 580 aa9.22□□□□□ -0.93
LINC00517-202ENST00000554257 NLRP13Q86W25 1043 aa9.22□□□□□ -0.93
LINC00517-202ENST00000554257 PNISRQ8TF01 805 aaKnown RBP9.22□□□□□ -0.93
LINC00517-202ENST00000554257 KDRP35968 1356 aa9.22□□□□□ -0.93
LINC00517-202ENST00000554257 BRWD3Q6RI45 1802 aa9.22□□□□□ -0.93
LINC00517-202ENST00000554257 GLI3P10071 1580 aa9.21□□□□□ -0.93
LINC00517-202ENST00000554257 ABTB2Q8N961 1025 aa9.21□□□□□ -0.93
LINC00517-202ENST00000554257 EMILIN1Q9Y6C2 1016 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms