RNA–Protein interactions for RNA: ENST00000554221.5

LINC00520-203, long intergenic non-protein coding RNA 520, humanhuman

TSL 3

Gene LINC00520, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-203ENST00000554221 SF3B2Q13435 895 aaKnown RBP9.54□□□□□ -0.88
LINC00520-203ENST00000554221 NEUROD1Q13562 356 aa9.54□□□□□ -0.88
LINC00520-203ENST00000554221 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
LINC00520-203ENST00000554221 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
LINC00520-203ENST00000554221 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
LINC00520-203ENST00000554221 FAM98CQ17RN3 349 aaKnown RBP9.53□□□□□ -0.88
LINC00520-203ENST00000554221 ZBTB12Q9Y330 459 aaPredicted RBP9.53□□□□□ -0.88
LINC00520-203ENST00000554221 TNS3Q68CZ2 1445 aa9.53□□□□□ -0.88
LINC00520-203ENST00000554221 ZC3H6P61129 1189 aaKnown RBP9.52□□□□□ -0.89
LINC00520-203ENST00000554221 SRPK2P78362 688 aaKnown RBP9.52□□□□□ -0.89
LINC00520-203ENST00000554221 NBPF8Q3BBV2 869 aa9.52□□□□□ -0.89
LINC00520-203ENST00000554221 KRT27Q7Z3Y8 459 aa9.52□□□□□ -0.89
LINC00520-203ENST00000554221 EVA1CP58658 441 aa9.51□□□□□ -0.89
LINC00520-203ENST00000554221 CHRNA2Q15822 529 aa9.51□□□□□ -0.89
LINC00520-203ENST00000554221 DEFB132Q7Z7B7 95 aa9.51□□□□□ -0.89
LINC00520-203ENST00000554221 SIN3AQ96ST3 1273 aa9.51□□□□□ -0.89
LINC00520-203ENST00000554221 PRDM11Q9NQV5 511 aa9.51□□□□□ -0.89
LINC00520-203ENST00000554221 STRN4Q9NRL3 753 aa9.51□□□□□ -0.89
LINC00520-203ENST00000554221 CCDC61Q9Y6R9 512 aa9.51□□□□□ -0.89
LINC00520-203ENST00000554221 LAMC1P11047 1609 aa9.51□□□□□ -0.89
LINC00520-203ENST00000554221 EIF3AQ14152 1382 aaKnown RBP9.5□□□□□ -0.89
LINC00520-203ENST00000554221 ANKARQ7Z5J8 1434 aa9.5□□□□□ -0.89
LINC00520-203ENST00000554221 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
LINC00520-203ENST00000554221 CHRDL2Q6WN34 429 aa9.5□□□□□ -0.89
LINC00520-203ENST00000554221 ABTB2Q8N961 1025 aa9.5□□□□□ -0.89
LINC00520-203ENST00000554221 L3MBTL2Q969R5 705 aa9.5□□□□□ -0.89
LINC00520-203ENST00000554221 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
LINC00520-203ENST00000554221 RALGAPBQ86X10 1494 aa9.5□□□□□ -0.89
LINC00520-203ENST00000554221 IFT172Q9UG01 1749 aa9.5□□□□□ -0.89
LINC00520-203ENST00000554221 ACEP12821 1306 aa9.5□□□□□ -0.89
LINC00520-203ENST00000554221 ZBTB7CA1YPR0 619 aa9.49□□□□□ -0.89
LINC00520-203ENST00000554221 FAM182BQ5T319 152 aa9.49□□□□□ -0.89
LINC00520-203ENST00000554221 USP35Q9P2H5 1018 aa9.49□□□□□ -0.89
LINC00520-203ENST00000554221 ATF5Q9Y2D1 282 aaPredicted RBP9.49□□□□□ -0.89
LINC00520-203ENST00000554221 SLIT2O94813 1529 aa9.49□□□□□ -0.89
LINC00520-203ENST00000554221 DLC1Q96QB1 1528 aa9.49□□□□□ -0.89
LINC00520-203ENST00000554221 COL22A1Q8NFW1 1626 aaPredicted RBP9.49□□□□□ -0.89
LINC00520-203ENST00000554221 FMN2Q9NZ56 1722 aa9.48□□□□□ -0.89
LINC00520-203ENST00000554221 PLEKHG3A1L390 1219 aa9.48□□□□□ -0.89
LINC00520-203ENST00000554221 CABP1Q9NZU7 370 aa9.48□□□□□ -0.89
LINC00520-203ENST00000554221 ADGRB1O14514 1584 aa9.48□□□□□ -0.89
LINC00520-203ENST00000554221 CENPJQ9HC77 1338 aaPredicted RBP9.47□□□□□ -0.89
LINC00520-203ENST00000554221 KNDC1Q76NI1 1749 aa9.47□□□□□ -0.89
LINC00520-203ENST00000554221 NLRP13Q86W25 1043 aa9.46□□□□□ -0.9
LINC00520-203ENST00000554221 KIF1AQ12756 1690 aa9.45□□□□□ -0.9
LINC00520-203ENST00000554221 BAG6P46379 1132 aa9.45□□□□□ -0.9
LINC00520-203ENST00000554221 NLRP6P59044 892 aa9.45□□□□□ -0.9
LINC00520-203ENST00000554221 SPATA31A5Q5VU36 1347 aa9.45□□□□□ -0.9
LINC00520-203ENST00000554221 SPATA31A7Q8IWB4 1347 aa9.45□□□□□ -0.9
LINC00520-203ENST00000554221 KIAA0232Q92628 1395 aa9.45□□□□□ -0.9
LINC00520-203ENST00000554221 TULP4Q9NRJ4 1543 aa9.45□□□□□ -0.9
LINC00520-203ENST00000554221 GCP02774 474 aa9.44□□□□□ -0.9
LINC00520-203ENST00000554221 EN1Q05925 392 aaPredicted RBP9.44□□□□□ -0.9
LINC00520-203ENST00000554221 BLMP54132 1417 aaPredicted RBP9.44□□□□□ -0.9
LINC00520-203ENST00000554221 RGPD8O14715 1765 aaPredicted RBP9.43□□□□□ -0.9
LINC00520-203ENST00000554221 PDE3BQ13370 1112 aa9.43□□□□□ -0.9
LINC00520-203ENST00000554221 LARP1Q6PKG0 1096 aaKnown RBP9.43□□□□□ -0.9
LINC00520-203ENST00000554221 USP32Q8NFA0 1604 aa9.42□□□□□ -0.9
LINC00520-203ENST00000554221 GLI3P10071 1580 aa9.42□□□□□ -0.9
LINC00520-203ENST00000554221 SPATA31A1Q5TZJ5 1347 aa9.42□□□□□ -0.9
LINC00520-203ENST00000554221 EVC2Q86UK5 1308 aa9.42□□□□□ -0.9
LINC00520-203ENST00000554221 PSDA5PKW4 1024 aaPredicted RBP9.42□□□□□ -0.9
LINC00520-203ENST00000554221 SOX12O15370 315 aa9.42□□□□□ -0.9
LINC00520-203ENST00000554221 PPIP5K1Q6PFW1 1433 aa9.41□□□□□ -0.9
LINC00520-203ENST00000554221 POLR3AO14802 1390 aaPredicted RBP9.41□□□□□ -0.9
LINC00520-203ENST00000554221 TRIM37O94972 964 aa9.41□□□□□ -0.9
LINC00520-203ENST00000554221 APBA3O96018 575 aa9.41□□□□□ -0.9
LINC00520-203ENST00000554221 FAM196AQ6ZSG2 479 aa9.41□□□□□ -0.9
LINC00520-203ENST00000554221 ATP7BP35670 1465 aa9.4□□□□□ -0.9
LINC00520-203ENST00000554221 ROCK2O75116 1388 aaKnown RBP9.4□□□□□ -0.9
LINC00520-203ENST00000554221 EZH2Q15910 746 aaKnown RBP9.4□□□□□ -0.9
LINC00520-203ENST00000554221 AKT1S1Q96B36 256 aa9.4□□□□□ -0.9
LINC00520-203ENST00000554221 ZNF692Q9BU19 519 aaPredicted RBP9.4□□□□□ -0.9
LINC00520-203ENST00000554221 ADGRB2O60241 1585 aa9.4□□□□□ -0.9
LINC00520-203ENST00000554221 TOM1L2Q6ZVM7 507 aa9.39□□□□□ -0.91
LINC00520-203ENST00000554221 TCP11L2Q8N4U5 519 aa9.39□□□□□ -0.91
LINC00520-203ENST00000554221 TMC1Q8TDI8 760 aa9.39□□□□□ -0.91
LINC00520-203ENST00000554221 CARD11Q9BXL7 1154 aa9.39□□□□□ -0.91
LINC00520-203ENST00000554221 R3HDM1Q15032 1099 aaKnown RBP9.38□□□□□ -0.91
LINC00520-203ENST00000554221 BARGINQ6ZT62 677 aa9.38□□□□□ -0.91
LINC00520-203ENST00000554221 SRCAPQ6ZRS2 3230 aa9.38□□□□□ -0.91
LINC00520-203ENST00000554221 MARF1Q9Y4F3 1742 aaKnown RBP9.37□□□□□ -0.91
LINC00520-203ENST00000554221 ZBTB22O15209 634 aa9.37□□□□□ -0.91
LINC00520-203ENST00000554221 CSB-PGBD3P0DP91 1061 aa9.37□□□□□ -0.91
LINC00520-203ENST00000554221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00520-203ENST00000554221 AXIN2Q9Y2T1 843 aa9.37□□□□□ -0.91
LINC00520-203ENST00000554221 THRAP3Q9Y2W1 955 aaKnown RBP9.37□□□□□ -0.91
LINC00520-203ENST00000554221 EP400Q96L91 3159 aa9.37□□□□□ -0.91
LINC00520-203ENST00000554221 TTC21BQ7Z4L5 1316 aa9.36□□□□□ -0.91
LINC00520-203ENST00000554221 KCNH5Q8NCM2 988 aa9.36□□□□□ -0.91
LINC00520-203ENST00000554221 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.36□□□□□ -0.91
LINC00520-203ENST00000554221 TRPM3Q9HCF6 1732 aaPredicted RBP9.36□□□□□ -0.91
LINC00520-203ENST00000554221 USP19O94966 1318 aa9.35□□□□□ -0.91
LINC00520-203ENST00000554221 DDB1Q16531 1140 aa9.35□□□□□ -0.91
LINC00520-203ENST00000554221 SSH2Q76I76 1423 aa9.35□□□□□ -0.91
LINC00520-203ENST00000554221 CAMKK2Q96RR4 588 aa9.35□□□□□ -0.91
LINC00520-203ENST00000554221 PLCH1Q4KWH8 1693 aa9.35□□□□□ -0.91
LINC00520-203ENST00000554221 BRD4O60885 1362 aaPredicted RBP9.35□□□□□ -0.91
LINC00520-203ENST00000554221 CPDO75976 1380 aa9.35□□□□□ -0.91
LINC00520-203ENST00000554221 COL14A1Q05707 1796 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms