RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 WNT7BP56706 349 aa10.66□□□□□ -0.7
ATXN3-225ENST00000554214 WNT7AO00755 349 aa10.65□□□□□ -0.7
ATXN3-225ENST00000554214 RC3H1Q5TC82 1133 aaKnown RBP10.65□□□□□ -0.7
ATXN3-225ENST00000554214 LRRN4Q8WUT4 740 aa10.64□□□□□ -0.71
ATXN3-225ENST00000554214 SH3BP2P78314 561 aa10.63□□□□□ -0.71
ATXN3-225ENST00000554214 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
ATXN3-225ENST00000554214 Q6ZNB5 142 aa10.63□□□□□ -0.71
ATXN3-225ENST00000554214 TMEM259Q4ZIN3 620 aa10.62□□□□□ -0.71
ATXN3-225ENST00000554214 CYP4X1Q8N118 509 aa10.62□□□□□ -0.71
ATXN3-225ENST00000554214 MRGPRX2Q96LB1 330 aa10.62□□□□□ -0.71
ATXN3-225ENST00000554214 TTC24A2A3L6 582 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-225ENST00000554214 ZNF511Q8NB15 262 aa10.6□□□□□ -0.71
ATXN3-225ENST00000554214 TOR4AQ9NXH8 423 aa10.6□□□□□ -0.71
ATXN3-225ENST00000554214 ARMC2Q8NEN0 867 aa10.59□□□□□ -0.71
ATXN3-225ENST00000554214 SNIP1Q8TAD8 396 aaKnown RBP10.59□□□□□ -0.71
ATXN3-225ENST00000554214 USP17L8P0C7I0 530 aa10.58□□□□□ -0.72
ATXN3-225ENST00000554214 EHBP1Q8NDI1 1231 aa10.58□□□□□ -0.72
ATXN3-225ENST00000554214 FAM187AA6NFU0 413 aa10.57□□□□□ -0.72
ATXN3-225ENST00000554214 DGAT1O75907 488 aa10.57□□□□□ -0.72
ATXN3-225ENST00000554214 NR6A1Q15406 480 aa10.57□□□□□ -0.72
ATXN3-225ENST00000554214 PKDCCQ504Y2 493 aa10.57□□□□□ -0.72
ATXN3-225ENST00000554214 SIAH2O43255 324 aa10.55□□□□□ -0.72
ATXN3-225ENST00000554214 AGERQ15109 404 aa10.55□□□□□ -0.72
ATXN3-225ENST00000554214 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
ATXN3-225ENST00000554214 FOXJ1Q92949 421 aa10.55□□□□□ -0.72
ATXN3-225ENST00000554214 VARSP26640 1264 aaKnown RBP10.54□□□□□ -0.72
ATXN3-225ENST00000554214 HMX1Q9NP08 348 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-225ENST00000554214 J3QL48 77 aa10.53□□□□□ -0.72
ATXN3-225ENST00000554214 EPS8L1Q8TE68 723 aa10.53□□□□□ -0.72
ATXN3-225ENST00000554214 FKBPLQ9UIM3 349 aa10.53□□□□□ -0.72
ATXN3-225ENST00000554214 ALDH1A1P00352 501 aa10.52□□□□□ -0.73
ATXN3-225ENST00000554214 NBPF14Q5TI25 921 aa10.52□□□□□ -0.73
ATXN3-225ENST00000554214 BPHLQ86WA6 291 aaPredicted RBP10.52□□□□□ -0.73
ATXN3-225ENST00000554214 BANK1Q8NDB2 785 aa10.52□□□□□ -0.73
ATXN3-225ENST00000554214 SMPD1P17405 629 aa10.51□□□□□ -0.73
ATXN3-225ENST00000554214 C4orf48Q5BLP8 95 aa10.5□□□□□ -0.73
ATXN3-225ENST00000554214 FAM174AQ8TBP5 190 aa10.5□□□□□ -0.73
ATXN3-225ENST00000554214 GPKOWQ92917 476 aaPredicted RBP eCLIP10.5□□□□□ -0.73
ATXN3-225ENST00000554214 LCE2BO14633 110 aa10.49□□□□□ -0.73
ATXN3-225ENST00000554214 MYT1Q01538 1121 aa10.49□□□□□ -0.73
ATXN3-225ENST00000554214 PDXDC2PQ6P474 469 aa10.49□□□□□ -0.73
ATXN3-225ENST00000554214 SH3BP5LQ7L8J4 393 aa10.48□□□□□ -0.73
ATXN3-225ENST00000554214 PNMA1Q8ND90 353 aa10.48□□□□□ -0.73
ATXN3-225ENST00000554214 TRIM34Q9BYJ4 488 aa10.48□□□□□ -0.73
ATXN3-225ENST00000554214 MAGEB6P1A0A0J9YX57 407 aa10.47□□□□□ -0.73
ATXN3-225ENST00000554214 SNRKQ9NRH2 765 aa10.47□□□□□ -0.73
ATXN3-225ENST00000554214 WASF2Q9Y6W5 498 aa10.47□□□□□ -0.73
ATXN3-225ENST00000554214 ARID5BQ14865 1188 aa10.46□□□□□ -0.73
ATXN3-225ENST00000554214 SH3RF1Q7Z6J0 888 aa10.46□□□□□ -0.73
ATXN3-225ENST00000554214 ZC3H4Q9UPT8 1303 aaKnown RBP10.46□□□□□ -0.73
ATXN3-225ENST00000554214 AVPP01185 164 aa10.45□□□□□ -0.74
ATXN3-225ENST00000554214 MPNDQ8N594 471 aa10.45□□□□□ -0.74
ATXN3-225ENST00000554214 HPS1Q92902 700 aa10.45□□□□□ -0.74
ATXN3-225ENST00000554214 GJD4Q96KN9 370 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-225ENST00000554214 ARHGAP9Q9BRR9 750 aa10.45□□□□□ -0.74
ATXN3-225ENST00000554214 TLL2Q9Y6L7 1015 aa10.45□□□□□ -0.74
ATXN3-225ENST00000554214 PTK2Q05397 1052 aa10.44□□□□□ -0.74
ATXN3-225ENST00000554214 CARD14Q9BXL6 1004 aa10.44□□□□□ -0.74
ATXN3-225ENST00000554214 ZBTB33Q86T24 672 aa10.43□□□□□ -0.74
ATXN3-225ENST00000554214 MTMR14Q8NCE2 650 aa10.43□□□□□ -0.74
ATXN3-225ENST00000554214 CDK15Q96Q40 435 aa10.43□□□□□ -0.74
ATXN3-225ENST00000554214 AAASQ9NRG9 546 aa10.43□□□□□ -0.74
ATXN3-225ENST00000554214 TMEM132AQ24JP5 1023 aa10.42□□□□□ -0.74
ATXN3-225ENST00000554214 C1QTNF2Q9BXJ5 285 aa10.42□□□□□ -0.74
ATXN3-225ENST00000554214 GPSM3Q9Y4H4 160 aa10.42□□□□□ -0.74
ATXN3-225ENST00000554214 AXIN1O15169 862 aa10.41□□□□□ -0.74
ATXN3-225ENST00000554214 ST8SIA5O15466 376 aa10.41□□□□□ -0.74
ATXN3-225ENST00000554214 CTC1Q2NKJ3 1217 aa10.41□□□□□ -0.74
ATXN3-225ENST00000554214 GRM5P41594 1212 aa10.4□□□□□ -0.74
ATXN3-225ENST00000554214 ERFEQ4G0M1 354 aa10.4□□□□□ -0.74
ATXN3-225ENST00000554214 OCSTAMPQ9BR26 566 aa10.4□□□□□ -0.74
ATXN3-225ENST00000554214 SMCPP49901 116 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-225ENST00000554214 TRMT44Q8IYL2 757 aaKnown RBP10.39□□□□□ -0.75
ATXN3-225ENST00000554214 CRIPAKQ8N1N5 446 aa10.39□□□□□ -0.75
ATXN3-225ENST00000554214 APBB1O00213 710 aa10.38□□□□□ -0.75
ATXN3-225ENST00000554214 SOCS7O14512 581 aa10.38□□□□□ -0.75
ATXN3-225ENST00000554214 ADH1CP00326 375 aa10.38□□□□□ -0.75
ATXN3-225ENST00000554214 VASH1Q7L8A9 365 aaPredicted RBP10.38□□□□□ -0.75
ATXN3-225ENST00000554214 ADAM32Q8TC27 787 aa10.38□□□□□ -0.75
ATXN3-225ENST00000554214 NR5A1Q13285 461 aa10.37□□□□□ -0.75
ATXN3-225ENST00000554214 NNTQ13423 1086 aa10.37□□□□□ -0.75
ATXN3-225ENST00000554214 DACH1Q9UI36 760 aa10.37□□□□□ -0.75
ATXN3-225ENST00000554214 NDUFB9Q9Y6M9 179 aa10.36□□□□□ -0.75
ATXN3-225ENST00000554214 ZBBXA8MT70 800 aa10.35□□□□□ -0.75
ATXN3-225ENST00000554214 MAP4K5Q9Y4K4 846 aa10.35□□□□□ -0.75
ATXN3-225ENST00000554214 SLC10A4Q96EP9 437 aa10.34□□□□□ -0.75
ATXN3-225ENST00000554214 PRM3Q9NNZ6 103 aa10.34□□□□□ -0.75
ATXN3-225ENST00000554214 CAPN5O15484 640 aaPredicted RBP10.33□□□□□ -0.76
ATXN3-225ENST00000554214 ZNF787Q6DD87 383 aa10.33□□□□□ -0.76
ATXN3-225ENST00000554214 DZIP3Q86Y13 1208 aaKnown RBP10.33□□□□□ -0.76
ATXN3-225ENST00000554214 NR3C2P08235 984 aa10.32□□□□□ -0.76
ATXN3-225ENST00000554214 FBXO45P0C2W1 286 aa10.32□□□□□ -0.76
ATXN3-225ENST00000554214 WDR4P57081 412 aaKnown RBP10.32□□□□□ -0.76
ATXN3-225ENST00000554214 KCTD15Q96SI1 283 aaPredicted RBP10.32□□□□□ -0.76
ATXN3-225ENST00000554214 CDV3Q9UKY7 258 aaKnown RBP10.32□□□□□ -0.76
ATXN3-225ENST00000554214 TBC1D2BQ9UPU7 963 aa10.32□□□□□ -0.76
ATXN3-225ENST00000554214 FSHRP23945 695 aa10.31□□□□□ -0.76
ATXN3-225ENST00000554214 KLF16Q9BXK1 252 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-225ENST00000554214 POTECB2RU33 542 aa10.3□□□□□ -0.76
ATXN3-225ENST00000554214 GPR37L1O60883 481 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms