RNA–Protein interactions for RNA: ENST00000554129.1

LINC01588-208, Transcript of long intergenic non-protein coding RNA 1588, human

TSL 2 BASIC

Gene LINC01588, Length 2,301 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01588-208	ENST00000554129	CARD14	Q9BXL6	1004 aa		13.78	□□□□□ -0.2
LINC01588-208	ENST00000554129	CHD2	O14647	1828 aa	Known RBP	13.77	□□□□□ -0.2
LINC01588-208	ENST00000554129	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.77	□□□□□ -0.2
LINC01588-208	ENST00000554129	PTCH1	Q13635	1447 aa		13.77	□□□□□ -0.2
LINC01588-208	ENST00000554129	C20orf194	Q5TEA3	1177 aa		13.76	□□□□□ -0.21
LINC01588-208	ENST00000554129	FAM43A	Q8N2R8	423 aa		13.76	□□□□□ -0.21
LINC01588-208	ENST00000554129	FRAT2	O75474	233 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC01588-208	ENST00000554129	RSPH6A	Q9H0K4	717 aa		13.75	□□□□□ -0.21
LINC01588-208	ENST00000554129	RBM33	Q96EV2	1170 aa	Known RBP	13.75	□□□□□ -0.21
LINC01588-208	ENST00000554129	KNSTRN	Q9Y448	316 aa		13.75	□□□□□ -0.21
LINC01588-208	ENST00000554129	ATAD2	Q6PL18	1390 aa		13.74	□□□□□ -0.21
LINC01588-208	ENST00000554129	CC2D1B	Q5T0F9	858 aa	Known RBP	13.74	□□□□□ -0.21
LINC01588-208	ENST00000554129	VIRMA	Q69YN4	1812 aa	Known RBP	13.74	□□□□□ -0.21
LINC01588-208	ENST00000554129	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC01588-208	ENST00000554129	EIF5B	O60841	1220 aa	Known RBP	13.73	□□□□□ -0.21
LINC01588-208	ENST00000554129	CABP1	Q9NZU7	370 aa		13.73	□□□□□ -0.21
LINC01588-208	ENST00000554129	STRC	Q7RTU9	1775 aa		13.72	□□□□□ -0.21
LINC01588-208	ENST00000554129	NUTM2F	A1L443	756 aa		13.72	□□□□□ -0.21
LINC01588-208	ENST00000554129	NUDT16	Q96DE0	195 aa	Known RBP	13.72	□□□□□ -0.21
LINC01588-208	ENST00000554129	PRR36	Q9H6K5	1346 aa		13.71	□□□□□ -0.21
LINC01588-208	ENST00000554129	ANKRD36B	Q8N2N9	1353 aa		13.71	□□□□□ -0.21
LINC01588-208	ENST00000554129	ADGRB2	O60241	1585 aa		13.71	□□□□□ -0.21
LINC01588-208	ENST00000554129		A0A1W2PP64	1363 aa		13.7	□□□□□ -0.22
LINC01588-208	ENST00000554129	NINL	Q9Y2I6	1382 aa		13.7	□□□□□ -0.22
LINC01588-208	ENST00000554129	CCDC61	Q9Y6R9	512 aa		13.7	□□□□□ -0.22
LINC01588-208	ENST00000554129	CD163L1	Q9NR16	1453 aa		13.7	□□□□□ -0.22
LINC01588-208	ENST00000554129	DUSP27	Q5VZP5	1158 aa		13.7	□□□□□ -0.22
LINC01588-208	ENST00000554129	NSD3	Q9BZ95	1437 aa		13.69	□□□□□ -0.22
LINC01588-208	ENST00000554129	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.69	□□□□□ -0.22
LINC01588-208	ENST00000554129	ATP7B	P35670	1465 aa		13.69	□□□□□ -0.22
LINC01588-208	ENST00000554129	TERF2IP	Q9NYB0	399 aa		13.68	□□□□□ -0.22
LINC01588-208	ENST00000554129	PPIP5K1	Q6PFW1	1433 aa		13.68	□□□□□ -0.22
LINC01588-208	ENST00000554129	NWD1	Q149M9	1564 aa		13.67	□□□□□ -0.22
LINC01588-208	ENST00000554129	ZNF521	Q96K83	1311 aa		13.67	□□□□□ -0.22
LINC01588-208	ENST00000554129	ADAMTS8	Q9UP79	889 aa		13.67	□□□□□ -0.22
LINC01588-208	ENST00000554129	NPC1L1	Q9UHC9	1359 aa		13.67	□□□□□ -0.22
LINC01588-208	ENST00000554129	PROSER2	Q86WR7	435 aa	Predicted RBP	13.67	□□□□□ -0.22
LINC01588-208	ENST00000554129	STRCP1	A6NGW2	1772 aa		13.66	□□□□□ -0.22
LINC01588-208	ENST00000554129	NALCN	Q8IZF0	1738 aa		13.66	□□□□□ -0.22
LINC01588-208	ENST00000554129	RGS3	P49796	1198 aa		13.65	□□□□□ -0.22
LINC01588-208	ENST00000554129	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.65	□□□□□ -0.22
LINC01588-208	ENST00000554129	USP32	Q8NFA0	1604 aa		13.65	□□□□□ -0.22
LINC01588-208	ENST00000554129	CPSF1	Q10570	1443 aa	Known RBP	13.65	□□□□□ -0.23
LINC01588-208	ENST00000554129	GOLGA2	Q08379	1002 aa		13.64	□□□□□ -0.23
LINC01588-208	ENST00000554129	USP19	O94966	1318 aa		13.64	□□□□□ -0.23
LINC01588-208	ENST00000554129	CGNL1	Q0VF96	1302 aa		13.64	□□□□□ -0.23
LINC01588-208	ENST00000554129	RGPD8	O14715	1765 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC01588-208	ENST00000554129	ADGRL3	Q9HAR2	1447 aa		13.64	□□□□□ -0.23
LINC01588-208	ENST00000554129	NKTR	P30414	1462 aa	Known RBP	13.63	□□□□□ -0.23
LINC01588-208	ENST00000554129	C14orf37	Q86TY3	774 aa		13.63	□□□□□ -0.23
LINC01588-208	ENST00000554129	PLEKHG3	A1L390	1219 aa		13.63	□□□□□ -0.23
LINC01588-208	ENST00000554129	FYB1	O15117	783 aa		13.62	□□□□□ -0.23
LINC01588-208	ENST00000554129	ACE	P12821	1306 aa		13.62	□□□□□ -0.23
LINC01588-208	ENST00000554129	TOPAZ1	Q8N9V7	1692 aa		13.62	□□□□□ -0.23
LINC01588-208	ENST00000554129	SLFN5	Q08AF3	891 aa		13.62	□□□□□ -0.23
LINC01588-208	ENST00000554129	PMFBP1	Q8TBY8	1022 aa		13.62	□□□□□ -0.23
LINC01588-208	ENST00000554129	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC01588-208	ENST00000554129	TMEM94	Q12767	1356 aa		13.61	□□□□□ -0.23
LINC01588-208	ENST00000554129	PPP2R1A	P30153	589 aa		13.61	□□□□□ -0.23
LINC01588-208	ENST00000554129	CDC42BPG	Q6DT37	1551 aa		13.61	□□□□□ -0.23
LINC01588-208	ENST00000554129	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
LINC01588-208	ENST00000554129	TRMT2A	Q8IZ69	625 aa	Known RBP	13.61	□□□□□ -0.23
LINC01588-208	ENST00000554129	FMN2	Q9NZ56	1722 aa		13.61	□□□□□ -0.23
LINC01588-208	ENST00000554129	WDR43	Q15061	677 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
LINC01588-208	ENST00000554129	GGNBP2	Q9H3C7	697 aa		13.61	□□□□□ -0.23
LINC01588-208	ENST00000554129	L1TD1	Q5T7N2	865 aa	Known RBP	13.6	□□□□□ -0.23
LINC01588-208	ENST00000554129	ZNF692	Q9BU19	519 aa	Predicted RBP	13.6	□□□□□ -0.23
LINC01588-208	ENST00000554129	C19orf44	Q9H6X5	657 aa		13.6	□□□□□ -0.23
LINC01588-208	ENST00000554129	ANKAR	Q7Z5J8	1434 aa		13.6	□□□□□ -0.23
LINC01588-208	ENST00000554129	TNNT2	P45379	298 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC01588-208	ENST00000554129	BECN1	Q14457	450 aa		13.59	□□□□□ -0.23
LINC01588-208	ENST00000554129	MORC1	Q86VD1	984 aa		13.59	□□□□□ -0.23
LINC01588-208	ENST00000554129	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.58	□□□□□ -0.23
LINC01588-208	ENST00000554129	EDC4	Q6P2E9	1401 aa	Known RBP	13.58	□□□□□ -0.24
LINC01588-208	ENST00000554129	AKAP12	Q02952	1782 aa		13.58	□□□□□ -0.24
LINC01588-208	ENST00000554129	DMRT2	Q9Y5R5	561 aa		13.58	□□□□□ -0.24
LINC01588-208	ENST00000554129	NSD2	O96028	1365 aa		13.58	□□□□□ -0.24
LINC01588-208	ENST00000554129	NGDN	Q8NEJ9	315 aa	Known RBP	13.57	□□□□□ -0.24
LINC01588-208	ENST00000554129	POLR3A	O14802	1390 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC01588-208	ENST00000554129	ITSN1	Q15811	1721 aa		13.57	□□□□□ -0.24
LINC01588-208	ENST00000554129	MON2	Q7Z3U7	1717 aa		13.57	□□□□□ -0.24
LINC01588-208	ENST00000554129	MAPK8IP3	Q9UPT6	1336 aa		13.57	□□□□□ -0.24
LINC01588-208	ENST00000554129	IGHD	P01880	384 aa		13.56	□□□□□ -0.24
LINC01588-208	ENST00000554129	NME9	Q86XW9	330 aa		13.56	□□□□□ -0.24
LINC01588-208	ENST00000554129	ANTXR1	Q9H6X2	564 aa		13.56	□□□□□ -0.24
LINC01588-208	ENST00000554129	USP6	P35125	1406 aa		13.56	□□□□□ -0.24
LINC01588-208	ENST00000554129	ESCO1	Q5FWF5	840 aa		13.56	□□□□□ -0.24
LINC01588-208	ENST00000554129	ZRANB1	Q9UGI0	708 aa		13.56	□□□□□ -0.24
LINC01588-208	ENST00000554129	NCOA3	Q9Y6Q9	1424 aa		13.55	□□□□□ -0.24
LINC01588-208	ENST00000554129	SEC24B	O95487	1268 aa		13.55	□□□□□ -0.24
LINC01588-208	ENST00000554129	ORAI2	Q96SN7	254 aa		13.55	□□□□□ -0.24
LINC01588-208	ENST00000554129	PHF8	Q9UPP1	1060 aa		13.55	□□□□□ -0.24
LINC01588-208	ENST00000554129	TTC21B	Q7Z4L5	1316 aa		13.55	□□□□□ -0.24
LINC01588-208	ENST00000554129	LRRC7	Q96NW7	1537 aa		13.54	□□□□□ -0.24
LINC01588-208	ENST00000554129	SSH2	Q76I76	1423 aa		13.54	□□□□□ -0.24
LINC01588-208	ENST00000554129	XIRP1	Q702N8	1843 aa	Known RBP	13.54	□□□□□ -0.24
LINC01588-208	ENST00000554129	BCAR3	O75815	825 aa		13.53	□□□□□ -0.24
LINC01588-208	ENST00000554129	ATF3	P18847	181 aa		13.53	□□□□□ -0.24
LINC01588-208	ENST00000554129	FBLN1	P23142	703 aa		13.53	□□□□□ -0.24
LINC01588-208	ENST00000554129	PDE3A	Q14432	1141 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms