RNA–Protein interactions for RNA: ENST00000553990.1

AL390816.1-201, humanhuman

TSL 3 BASIC

Gene AL390816.1, Length 322 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390816.1-201ENST00000553990 ARHGEF10O15013 1369 aa8.52□□□□□ -1.05
AL390816.1-201ENST00000553990 CHRNA2Q15822 529 aa8.52□□□□□ -1.05
AL390816.1-201ENST00000553990 KRT27Q7Z3Y8 459 aa8.52□□□□□ -1.05
AL390816.1-201ENST00000553990 ACIN1Q9UKV3 1341 aaKnown RBP8.52□□□□□ -1.05
AL390816.1-201ENST00000553990 ATP7BP35670 1465 aa8.51□□□□□ -1.05
AL390816.1-201ENST00000553990 TOPAZ1Q8N9V7 1692 aa8.51□□□□□ -1.05
AL390816.1-201ENST00000553990 THSD7AQ9UPZ6 1657 aa8.51□□□□□ -1.05
AL390816.1-201ENST00000553990 SIRT1Q96EB6 747 aa8.51□□□□□ -1.05
AL390816.1-201ENST00000553990 SRCAPQ6ZRS2 3230 aa8.51□□□□□ -1.05
AL390816.1-201ENST00000553990 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
AL390816.1-201ENST00000553990 WASLO00401 505 aaPredicted RBP8.5□□□□□ -1.05
AL390816.1-201ENST00000553990 RGPD1P0DJD0 1748 aa8.5□□□□□ -1.05
AL390816.1-201ENST00000553990 EN1Q05925 392 aaPredicted RBP8.5□□□□□ -1.05
AL390816.1-201ENST00000553990 SF3B2Q13435 895 aaKnown RBP8.5□□□□□ -1.05
AL390816.1-201ENST00000553990 NGDNQ8NEJ9 315 aaKnown RBP8.5□□□□□ -1.05
AL390816.1-201ENST00000553990 GPRASP1Q5JY77 1395 aa8.49□□□□□ -1.05
AL390816.1-201ENST00000553990 NRKQ7Z2Y5 1582 aa8.49□□□□□ -1.05
AL390816.1-201ENST00000553990 STRN4Q9NRL3 753 aa8.49□□□□□ -1.05
AL390816.1-201ENST00000553990 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
AL390816.1-201ENST00000553990 ZC3H6P61129 1189 aaKnown RBP8.48□□□□□ -1.05
AL390816.1-201ENST00000553990 CCDC125Q86Z20 511 aa8.48□□□□□ -1.05
AL390816.1-201ENST00000553990 NUDT16Q96DE0 195 aaKnown RBP8.48□□□□□ -1.05
AL390816.1-201ENST00000553990 PRDM11Q9NQV5 511 aa8.48□□□□□ -1.05
AL390816.1-201ENST00000553990 USP35Q9P2H5 1018 aa8.48□□□□□ -1.05
AL390816.1-201ENST00000553990 LRP5O75197 1615 aa8.47□□□□□ -1.05
AL390816.1-201ENST00000553990 ZBTB7CA1YPR0 619 aa8.47□□□□□ -1.05
AL390816.1-201ENST00000553990 ONECUT3O60422 494 aaPredicted RBP8.47□□□□□ -1.05
AL390816.1-201ENST00000553990 CDK19Q9BWU1 502 aa8.47□□□□□ -1.05
AL390816.1-201ENST00000553990 SPATA31A5Q5VU36 1347 aa8.47□□□□□ -1.05
AL390816.1-201ENST00000553990 SPATA31A7Q8IWB4 1347 aa8.47□□□□□ -1.05
AL390816.1-201ENST00000553990 BAG6P46379 1132 aa8.46□□□□□ -1.06
AL390816.1-201ENST00000553990 R3HDM1Q15032 1099 aaKnown RBP8.46□□□□□ -1.06
AL390816.1-201ENST00000553990 EZH2Q15910 746 aaKnown RBP8.46□□□□□ -1.06
AL390816.1-201ENST00000553990 NBPF1Q3BBV0 1214 aa8.46□□□□□ -1.06
AL390816.1-201ENST00000553990 ACEP12821 1306 aa8.46□□□□□ -1.06
AL390816.1-201ENST00000553990 QRICH2Q9H0J4 1663 aa8.46□□□□□ -1.06
AL390816.1-201ENST00000553990 TRIM37O94972 964 aa8.45□□□□□ -1.06
AL390816.1-201ENST00000553990 HRCP23327 699 aa8.45□□□□□ -1.06
AL390816.1-201ENST00000553990 LMO7Q8WWI1 1683 aa8.45□□□□□ -1.06
AL390816.1-201ENST00000553990 CAMTA1Q9Y6Y1 1673 aa8.45□□□□□ -1.06
AL390816.1-201ENST00000553990 SPATA31A1Q5TZJ5 1347 aa8.45□□□□□ -1.06
AL390816.1-201ENST00000553990 EIF3AQ14152 1382 aaKnown RBP8.45□□□□□ -1.06
AL390816.1-201ENST00000553990 NUP188Q5SRE5 1749 aa8.44□□□□□ -1.06
AL390816.1-201ENST00000553990 LARP1Q6PKG0 1096 aaKnown RBP8.44□□□□□ -1.06
AL390816.1-201ENST00000553990 CABP2Q9NPB3 220 aa8.44□□□□□ -1.06
AL390816.1-201ENST00000553990 SSH2Q76I76 1423 aa8.44□□□□□ -1.06
AL390816.1-201ENST00000553990 RREB1Q92766 1687 aa8.43□□□□□ -1.06
AL390816.1-201ENST00000553990 KIAA1210Q9ULL0 1709 aa8.43□□□□□ -1.06
AL390816.1-201ENST00000553990 PPIP5K1Q6PFW1 1433 aa8.43□□□□□ -1.06
AL390816.1-201ENST00000553990 SRPK2P78362 688 aaKnown RBP8.42□□□□□ -1.06
AL390816.1-201ENST00000553990 NBPF8Q3BBV2 869 aa8.42□□□□□ -1.06
AL390816.1-201ENST00000553990 POLR3AO14802 1390 aaPredicted RBP8.42□□□□□ -1.06
AL390816.1-201ENST00000553990 PIK3C2AO00443 1686 aa8.42□□□□□ -1.06
AL390816.1-201ENST00000553990 WNK3Q9BYP7 1800 aa8.41□□□□□ -1.06
AL390816.1-201ENST00000553990 RGPD5Q99666 1765 aa8.41□□□□□ -1.06
AL390816.1-201ENST00000553990 LRRC37A3O60309 1634 aa8.41□□□□□ -1.06
AL390816.1-201ENST00000553990 APBA3O96018 575 aa8.41□□□□□ -1.06
AL390816.1-201ENST00000553990 EVA1CP58658 441 aa8.41□□□□□ -1.06
AL390816.1-201ENST00000553990 ABTB2Q8N961 1025 aa8.41□□□□□ -1.06
AL390816.1-201ENST00000553990 SOX12O15370 315 aa8.4□□□□□ -1.06
AL390816.1-201ENST00000553990 PTF1AQ7RTS3 328 aa8.4□□□□□ -1.06
AL390816.1-201ENST00000553990 CAMKK2Q96RR4 588 aa8.4□□□□□ -1.06
AL390816.1-201ENST00000553990 PARP4Q9UKK3 1724 aaKnown RBP8.4□□□□□ -1.07
AL390816.1-201ENST00000553990 TRPM1Q7Z4N2 1603 aa8.4□□□□□ -1.07
AL390816.1-201ENST00000553990 COL5A2P05997 1499 aaPredicted RBP8.39□□□□□ -1.07
AL390816.1-201ENST00000553990 DISP2A7MBM2 1401 aa8.39□□□□□ -1.07
AL390816.1-201ENST00000553990 USP19O94966 1318 aa8.39□□□□□ -1.07
AL390816.1-201ENST00000553990 SIN3AQ96ST3 1273 aa8.39□□□□□ -1.07
AL390816.1-201ENST00000553990 CCDC61Q9Y6R9 512 aa8.39□□□□□ -1.07
AL390816.1-201ENST00000553990 COL18A1P39060 1754 aa8.38□□□□□ -1.07
AL390816.1-201ENST00000553990 PEAK1Q9H792 1746 aa8.38□□□□□ -1.07
AL390816.1-201ENST00000553990 CENPJQ9HC77 1338 aaPredicted RBP8.38□□□□□ -1.07
AL390816.1-201ENST00000553990 PLEKHG3A1L390 1219 aa8.38□□□□□ -1.07
AL390816.1-201ENST00000553990 PDE3BQ13370 1112 aa8.38□□□□□ -1.07
AL390816.1-201ENST00000553990 CABP1Q9NZU7 370 aa8.38□□□□□ -1.07
AL390816.1-201ENST00000553990 SLIT3O75094 1523 aa8.38□□□□□ -1.07
AL390816.1-201ENST00000553990 SBF2Q86WG5 1849 aa8.38□□□□□ -1.07
AL390816.1-201ENST00000553990 USP6P35125 1406 aa8.37□□□□□ -1.07
AL390816.1-201ENST00000553990 GCP02774 474 aa8.37□□□□□ -1.07
AL390816.1-201ENST00000553990 FAM196AQ6ZSG2 479 aa8.37□□□□□ -1.07
AL390816.1-201ENST00000553990 TCP11L2Q8N4U5 519 aa8.37□□□□□ -1.07
AL390816.1-201ENST00000553990 AKAP12Q02952 1782 aa8.37□□□□□ -1.07
AL390816.1-201ENST00000553990 CPDO75976 1380 aa8.36□□□□□ -1.07
AL390816.1-201ENST00000553990 NLRP6P59044 892 aa8.36□□□□□ -1.07
AL390816.1-201ENST00000553990 NEUROD1Q13562 356 aa8.36□□□□□ -1.07
AL390816.1-201ENST00000553990 BARGINQ6ZT62 677 aa8.36□□□□□ -1.07
AL390816.1-201ENST00000553990 L3MBTL2Q969R5 705 aa8.36□□□□□ -1.07
AL390816.1-201ENST00000553990 AXIN2Q9Y2T1 843 aa8.36□□□□□ -1.07
AL390816.1-201ENST00000553990 NLRP13Q86W25 1043 aa8.35□□□□□ -1.07
AL390816.1-201ENST00000553990 PDGFDQ9GZP0 370 aaPredicted RBP8.35□□□□□ -1.07
AL390816.1-201ENST00000553990 ANO8Q9HCE9 1232 aaPredicted RBP8.35□□□□□ -1.07
AL390816.1-201ENST00000553990 CRB1P82279 1406 aa8.35□□□□□ -1.07
AL390816.1-201ENST00000553990 TOM1L2Q6ZVM7 507 aa8.34□□□□□ -1.07
AL390816.1-201ENST00000553990 CPSF1Q10570 1443 aaKnown RBP8.34□□□□□ -1.07
AL390816.1-201ENST00000553990 CASZ1Q86V15 1759 aa8.33□□□□□ -1.08
AL390816.1-201ENST00000553990 OVOS2A0A0G2JMS6 1433 aa8.33□□□□□ -1.08
AL390816.1-201ENST00000553990 OVOS2A0A0J9YW53 1432 aa8.33□□□□□ -1.08
AL390816.1-201ENST00000553990 OVOS2Q6IE36 1432 aa8.33□□□□□ -1.08
AL390816.1-201ENST00000553990 MON2Q7Z3U7 1717 aa8.33□□□□□ -1.08
AL390816.1-201ENST00000553990 STAC3Q96MF2 364 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms