RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 CABP1Q9NZU7 370 aa11.63□□□□□ -0.55
AL049839.2-201ENST00000553947 SETD1AO15047 1707 aaKnown RBP11.62□□□□□ -0.55
AL049839.2-201ENST00000553947 NGEFQ8N5V2 710 aa11.62□□□□□ -0.55
AL049839.2-201ENST00000553947 NLRP1Q9C000 1473 aa11.62□□□□□ -0.55
AL049839.2-201ENST00000553947 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
AL049839.2-201ENST00000553947 TERF2IPQ9NYB0 399 aa11.61□□□□□ -0.55
AL049839.2-201ENST00000553947 U2AF1L5P0DN76 240 aaPredicted RBP11.61□□□□□ -0.55
AL049839.2-201ENST00000553947 U2AF1Q01081 240 aaKnown RBP eCLIP11.61□□□□□ -0.554e-12■■□□□ 14.4
AL049839.2-201ENST00000553947 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.61□□□□□ -0.55
AL049839.2-201ENST00000553947 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 RRP9O43818 475 aaKnown RBP11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 ARXQ96QS3 562 aa11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 BACH2Q9BYV9 841 aa11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 PNNQ9H307 717 aaKnown RBP11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 NRXN3Q9Y4C0 1643 aa11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 METP08581 1390 aa11.6□□□□□ -0.55
AL049839.2-201ENST00000553947 RRAGDQ9NQL2 400 aaPredicted RBP11.59□□□□□ -0.55
AL049839.2-201ENST00000553947 COL3A1P02461 1466 aaPredicted RBP11.59□□□□□ -0.55
AL049839.2-201ENST00000553947 DLC1Q96QB1 1528 aa11.59□□□□□ -0.55
AL049839.2-201ENST00000553947 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.55
AL049839.2-201ENST00000553947 FBLN1P23142 703 aa11.58□□□□□ -0.55
AL049839.2-201ENST00000553947 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
AL049839.2-201ENST00000553947 ESF1Q9H501 851 aaKnown RBP11.58□□□□□ -0.56
AL049839.2-201ENST00000553947 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
AL049839.2-201ENST00000553947 TXNDC2Q86VQ3 553 aa11.58□□□□□ -0.56
AL049839.2-201ENST00000553947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.57□□□□□ -0.56
AL049839.2-201ENST00000553947 ANKRD26Q9UPS8 1709 aa11.57□□□□□ -0.56
AL049839.2-201ENST00000553947 MED14O60244 1454 aa11.57□□□□□ -0.56
AL049839.2-201ENST00000553947 WDR63Q8IWG1 891 aa11.57□□□□□ -0.56
AL049839.2-201ENST00000553947 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
AL049839.2-201ENST00000553947 CCDC27Q2M243 656 aa11.56□□□□□ -0.56
AL049839.2-201ENST00000553947 ADGRB2O60241 1585 aa11.56□□□□□ -0.56
AL049839.2-201ENST00000553947 NCKAP5LQ9HCH0 1330 aa11.56□□□□□ -0.56
AL049839.2-201ENST00000553947 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
AL049839.2-201ENST00000553947 MS4A1P11836 297 aa11.55□□□□□ -0.56
AL049839.2-201ENST00000553947 RARSP54136 660 aaKnown RBP11.55□□□□□ -0.56
AL049839.2-201ENST00000553947 CENPQQ7L2Z9 268 aaPredicted RBP11.55□□□□□ -0.56
AL049839.2-201ENST00000553947 TNNQ9UQP3 1299 aa11.55□□□□□ -0.56
AL049839.2-201ENST00000553947 TNRQ92752 1358 aa11.55□□□□□ -0.56
AL049839.2-201ENST00000553947 KIF20BQ96Q89 1820 aa11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 BCL2L13Q9BXK5 485 aa11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 WASLO00401 505 aaPredicted RBP11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 RBM10P98175 930 aaKnown RBP11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 COG6Q9Y2V7 657 aa11.54□□□□□ -0.56
AL049839.2-201ENST00000553947 PNPLA6Q8IY17 1366 aa11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 ATP7BP35670 1465 aa11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 DIAPH1O60610 1272 aaKnown RBP11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 PDE3AQ14432 1141 aa11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 TSR2Q969E8 191 aaKnown RBP11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
AL049839.2-201ENST00000553947 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.56
AL049839.2-201ENST00000553947 CANXP27824 592 aaKnown RBP11.52□□□□□ -0.56
AL049839.2-201ENST00000553947 POLKQ9UBT6 870 aa11.52□□□□□ -0.56
AL049839.2-201ENST00000553947 TMEM2Q9UHN6 1383 aa11.52□□□□□ -0.57
AL049839.2-201ENST00000553947 IGHDP01880 384 aa11.52□□□□□ -0.57
AL049839.2-201ENST00000553947 CEBPAP49715 358 aaPredicted RBP11.52□□□□□ -0.57
AL049839.2-201ENST00000553947 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.57
AL049839.2-201ENST00000553947 CPSF1Q10570 1443 aaKnown RBP11.52□□□□□ -0.57
AL049839.2-201ENST00000553947 RLBP1P12271 317 aa11.51□□□□□ -0.57
AL049839.2-201ENST00000553947 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
AL049839.2-201ENST00000553947 NME9Q86XW9 330 aa11.51□□□□□ -0.57
AL049839.2-201ENST00000553947 NUDT16Q96DE0 195 aaKnown RBP11.51□□□□□ -0.57
AL049839.2-201ENST00000553947 LTKP29376 864 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 MYH16Q9H6N6 1097 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 MAPK8IP3Q9UPT6 1336 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 EMILIN1Q9Y6C2 1016 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 TECPR2O15040 1411 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
AL049839.2-201ENST00000553947 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 L1TD1Q5T7N2 865 aaKnown RBP11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 ADAMTS13Q76LX8 1427 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 CPS1P31327 1500 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 RIPK4P57078 832 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 FAM135BQ49AJ0 1406 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 KNDC1Q76NI1 1749 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 EDC4Q6P2E9 1401 aaKnown RBP11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 RGS3P49796 1198 aa11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 HDGFP51858 240 aaKnown RBP11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 EXOSC9Q06265 439 aaKnown RBP11.49□□□□□ -0.57
AL049839.2-201ENST00000553947 LRRC7Q96NW7 1537 aa11.48□□□□□ -0.57
AL049839.2-201ENST00000553947 SIRT1Q96EB6 747 aa11.48□□□□□ -0.57
AL049839.2-201ENST00000553947 MAP2P11137 1827 aaKnown RBP11.48□□□□□ -0.57
AL049839.2-201ENST00000553947 CCDC61Q9Y6R9 512 aa11.48□□□□□ -0.57
AL049839.2-201ENST00000553947 PRKAR2BP31323 418 aa11.47□□□□□ -0.57
AL049839.2-201ENST00000553947 CDC42BPGQ6DT37 1551 aa11.47□□□□□ -0.57
AL049839.2-201ENST00000553947 HMOX1P09601 288 aa11.47□□□□□ -0.57
AL049839.2-201ENST00000553947 FCHSD2O94868 740 aa11.46□□□□□ -0.57
AL049839.2-201ENST00000553947 PHACTR3Q96KR7 559 aa11.46□□□□□ -0.57
AL049839.2-201ENST00000553947 SLC26A8Q96RN1 970 aa11.46□□□□□ -0.57
AL049839.2-201ENST00000553947 NUTM2FA1L443 756 aa11.46□□□□□ -0.58
AL049839.2-201ENST00000553947 RRS1Q15050 365 aaKnown RBP11.46□□□□□ -0.58
AL049839.2-201ENST00000553947 C8orf34Q49A92 452 aa11.46□□□□□ -0.58
AL049839.2-201ENST00000553947 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.58
AL049839.2-201ENST00000553947 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.46□□□□□ -0.58
AL049839.2-201ENST00000553947 AAMPQ13685 434 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms