RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 PANK3Q9H999 370 aa18.73■□□□□ 0.59
PSMC6-205ENST00000553899 ALS2Q96Q42 1657 aa18.73■□□□□ 0.59
PSMC6-205ENST00000553899 ARHGEF10O15013 1369 aa18.72■□□□□ 0.59
PSMC6-205ENST00000553899 POLR3GLQ9BT43 218 aa18.72■□□□□ 0.59
PSMC6-205ENST00000553899 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
PSMC6-205ENST00000553899 PER1O15534 1290 aaPredicted RBP18.71■□□□□ 0.59
PSMC6-205ENST00000553899 TNS3Q68CZ2 1445 aa18.71■□□□□ 0.59
PSMC6-205ENST00000553899 TTC21BQ7Z4L5 1316 aa18.71■□□□□ 0.59
PSMC6-205ENST00000553899 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
PSMC6-205ENST00000553899 NPC1L1Q9UHC9 1359 aa18.7■□□□□ 0.58
PSMC6-205ENST00000553899 USP54Q70EL1 1684 aa18.7■□□□□ 0.58
PSMC6-205ENST00000553899 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
PSMC6-205ENST00000553899 NSD2O96028 1365 aa18.69■□□□□ 0.58
PSMC6-205ENST00000553899 CGNL1Q0VF96 1302 aa18.69■□□□□ 0.58
PSMC6-205ENST00000553899 USP31Q70CQ4 1352 aa18.68■□□□□ 0.58
PSMC6-205ENST00000553899 COL22A1Q8NFW1 1626 aaPredicted RBP18.68■□□□□ 0.58
PSMC6-205ENST00000553899 KNSTRNQ9Y448 316 aa18.68■□□□□ 0.58
PSMC6-205ENST00000553899 SHPRHQ149N8 1683 aa18.67■□□□□ 0.58
PSMC6-205ENST00000553899 MED1Q15648 1581 aaPredicted RBP18.67■□□□□ 0.58
PSMC6-205ENST00000553899 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
PSMC6-205ENST00000553899 DDX17Q92841 729 aaKnown RBP18.66■□□□□ 0.58
PSMC6-205ENST00000553899 PIK3C2AO00443 1686 aa18.66■□□□□ 0.58
PSMC6-205ENST00000553899 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
PSMC6-205ENST00000553899 ABTB2Q8N961 1025 aa18.65■□□□□ 0.58
PSMC6-205ENST00000553899 JCADQ9P266 1359 aa18.65■□□□□ 0.58
PSMC6-205ENST00000553899 FYB1O15117 783 aa18.64■□□□□ 0.57
PSMC6-205ENST00000553899 PAK3O75914 559 aaPredicted RBP18.64■□□□□ 0.57
PSMC6-205ENST00000553899 HSPA1LP34931 641 aa18.64■□□□□ 0.57
PSMC6-205ENST00000553899 KIF20BQ96Q89 1820 aa18.64■□□□□ 0.57
PSMC6-205ENST00000553899 XPCQ01831 940 aaPredicted RBP18.63■□□□□ 0.57
PSMC6-205ENST00000553899 AMER1Q5JTC6 1135 aaPredicted RBP18.63■□□□□ 0.57
PSMC6-205ENST00000553899 ANKRD26Q9UPS8 1709 aa18.63■□□□□ 0.57
PSMC6-205ENST00000553899 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
PSMC6-205ENST00000553899 USP19O94966 1318 aa18.62■□□□□ 0.57
PSMC6-205ENST00000553899 PNPLA6Q8IY17 1366 aa18.62■□□□□ 0.57
PSMC6-205ENST00000553899 OVOS2A0A0J9YW53 1432 aa18.61■□□□□ 0.57
PSMC6-205ENST00000553899 OVOS2Q6IE36 1432 aa18.61■□□□□ 0.57
PSMC6-205ENST00000553899 SPATA31A6Q5VVP1 1343 aa18.61■□□□□ 0.57
PSMC6-205ENST00000553899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.61■□□□□ 0.57
PSMC6-205ENST00000553899 CRYBG1Q9Y4K1 1723 aa18.6■□□□□ 0.57
PSMC6-205ENST00000553899 NLRP6P59044 892 aa18.6■□□□□ 0.57
PSMC6-205ENST00000553899 KCNH5Q8NCM2 988 aa18.6■□□□□ 0.57
PSMC6-205ENST00000553899 MARF1Q9Y4F3 1742 aaKnown RBP18.6■□□□□ 0.57
PSMC6-205ENST00000553899 SLIT3O75094 1523 aa18.59■□□□□ 0.57
PSMC6-205ENST00000553899 COG3Q96JB2 828 aa18.59■□□□□ 0.57
PSMC6-205ENST00000553899 NME9Q86XW9 330 aa18.58■□□□□ 0.56
PSMC6-205ENST00000553899 PHRF1Q9P1Y6 1649 aaKnown RBP18.56■□□□□ 0.56
PSMC6-205ENST00000553899 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
PSMC6-205ENST00000553899 ABCA3Q99758 1704 aa18.55■□□□□ 0.56
PSMC6-205ENST00000553899 LMOD2Q6P5Q4 547 aa18.55■□□□□ 0.56
PSMC6-205ENST00000553899 CPDO75976 1380 aa18.55■□□□□ 0.56
PSMC6-205ENST00000553899 GCP02774 474 aa18.54■□□□□ 0.56
PSMC6-205ENST00000553899 KIF24Q5T7B8 1368 aa18.54■□□□□ 0.56
PSMC6-205ENST00000553899 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
PSMC6-205ENST00000553899 ABCC6O95255 1503 aa18.53■□□□□ 0.56
PSMC6-205ENST00000553899 NFAT5O94916 1531 aa18.52■□□□□ 0.56
PSMC6-205ENST00000553899 RALBP1Q15311 655 aa18.51■□□□□ 0.55
PSMC6-205ENST00000553899 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
PSMC6-205ENST00000553899 PARD3Q8TEW0 1356 aa18.5■□□□□ 0.55
PSMC6-205ENST00000553899 ZRANB1Q9UGI0 708 aa18.49■□□□□ 0.55
PSMC6-205ENST00000553899 NUTM2GQ5VZR2 741 aa18.48■□□□□ 0.55
PSMC6-205ENST00000553899 ARHGEF25Q86VW2 580 aa18.48■□□□□ 0.55
PSMC6-205ENST00000553899 MAP2P11137 1827 aaKnown RBP18.46■□□□□ 0.55
PSMC6-205ENST00000553899 RTL1A6NKG5 1358 aa18.46■□□□□ 0.55
PSMC6-205ENST00000553899 HAP1P54257 671 aaPredicted RBP18.46■□□□□ 0.55
PSMC6-205ENST00000553899 CC2D1BQ5T0F9 858 aaKnown RBP18.46■□□□□ 0.55
PSMC6-205ENST00000553899 CABLES1Q8TDN4 633 aa18.46■□□□□ 0.55
PSMC6-205ENST00000553899 SMG6Q86US8 1419 aaKnown RBP18.46■□□□□ 0.55
PSMC6-205ENST00000553899 COL14A1Q05707 1796 aaKnown RBP18.45■□□□□ 0.54
PSMC6-205ENST00000553899 ILDR1Q86SU0 546 aaPredicted RBP18.45■□□□□ 0.54
PSMC6-205ENST00000553899 LTN1O94822 1766 aa18.45■□□□□ 0.54
PSMC6-205ENST00000553899 PRKRIP1Q9H875 184 aaPredicted RBP18.44■□□□□ 0.54
PSMC6-205ENST00000553899 INSRP06213 1382 aa18.43■□□□□ 0.54
PSMC6-205ENST00000553899 NWD2Q9ULI1 1742 aa18.43■□□□□ 0.54
PSMC6-205ENST00000553899 KIAA0232Q92628 1395 aa18.42■□□□□ 0.54
PSMC6-205ENST00000553899 COL18A1P39060 1754 aa18.42■□□□□ 0.54
PSMC6-205ENST00000553899 BLMP54132 1417 aaPredicted RBP18.42■□□□□ 0.54
PSMC6-205ENST00000553899 LMO7Q8WWI1 1683 aa18.42■□□□□ 0.54
PSMC6-205ENST00000553899 POLKQ9UBT6 870 aa18.42■□□□□ 0.54
PSMC6-205ENST00000553899 LRP6O75581 1613 aa18.41■□□□□ 0.54
PSMC6-205ENST00000553899 FNBP4Q8N3X1 1017 aaPredicted RBP18.41■□□□□ 0.54
PSMC6-205ENST00000553899 IP6K1Q92551 441 aa18.41■□□□□ 0.54
PSMC6-205ENST00000553899 PRDM11Q9NQV5 511 aa18.41■□□□□ 0.54
PSMC6-205ENST00000553899 MAP3K19Q56UN5 1328 aa18.41■□□□□ 0.54
PSMC6-205ENST00000553899 FLT4P35916 1363 aa18.41■□□□□ 0.54
PSMC6-205ENST00000553899 FAM83GA6ND36 823 aa18.4■□□□□ 0.54
PSMC6-205ENST00000553899 ANP32CO43423 234 aa18.4■□□□□ 0.54
PSMC6-205ENST00000553899 CDK12Q9NYV4 1490 aaPredicted RBP18.39■□□□□ 0.54
PSMC6-205ENST00000553899 ZC3H6P61129 1189 aaKnown RBP18.39■□□□□ 0.53
PSMC6-205ENST00000553899 MYBBP1AQ9BQG0 1328 aaKnown RBP18.39■□□□□ 0.53
PSMC6-205ENST00000553899 SLIT2O94813 1529 aa18.39■□□□□ 0.53
PSMC6-205ENST00000553899 NUTM2BA6NNL0 878 aaPredicted RBP18.38■□□□□ 0.53
PSMC6-205ENST00000553899 NUTM2EB1AL46 878 aaPredicted RBP18.38■□□□□ 0.53
PSMC6-205ENST00000553899 PPP2R1AP30153 589 aa18.38■□□□□ 0.53
PSMC6-205ENST00000553899 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
PSMC6-205ENST00000553899 NUTM2AQ8IVF1 878 aaPredicted RBP18.38■□□□□ 0.53
PSMC6-205ENST00000553899 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.37■□□□□ 0.53
PSMC6-205ENST00000553899 AMPHP49418 695 aa18.37■□□□□ 0.53
PSMC6-205ENST00000553899 ADAMTS2O95450 1211 aa18.36■□□□□ 0.53
PSMC6-205ENST00000553899 HOXC9P31274 260 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms