RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 PTPRNQ16849 979 aa8□□□□□ -1.13
LINC00648-201ENST00000553747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8□□□□□ -1.13
LINC00648-201ENST00000553747 KCTD17Q8N5Z5 321 aa8□□□□□ -1.13
LINC00648-201ENST00000553747 PLEKHG3A1L390 1219 aa7.99□□□□□ -1.13
LINC00648-201ENST00000553747 VARSP26640 1264 aaKnown RBP7.99□□□□□ -1.13
LINC00648-201ENST00000553747 C6orf118Q5T5N4 469 aa7.99□□□□□ -1.13
LINC00648-201ENST00000553747 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
LINC00648-201ENST00000553747 ADH1CP00326 375 aa7.98□□□□□ -1.13
LINC00648-201ENST00000553747 KRI1Q8N9T8 703 aaKnown RBP7.98□□□□□ -1.13
LINC00648-201ENST00000553747 SPIRE2Q8WWL2 714 aa7.98□□□□□ -1.13
LINC00648-201ENST00000553747 ZFAND3Q9H8U3 227 aa7.98□□□□□ -1.13
LINC00648-201ENST00000553747 MOXD2PA6NHM9 499 aa7.97□□□□□ -1.13
LINC00648-201ENST00000553747 VSIG8P0DPA2 414 aa7.97□□□□□ -1.13
LINC00648-201ENST00000553747 ARID5BQ14865 1188 aa7.97□□□□□ -1.13
LINC00648-201ENST00000553747 KLF16Q9BXK1 252 aaPredicted RBP7.97□□□□□ -1.13
LINC00648-201ENST00000553747 MAN1A2O60476 641 aa7.96□□□□□ -1.14
LINC00648-201ENST00000553747 CTHP32929 405 aa7.96□□□□□ -1.14
LINC00648-201ENST00000553747 FOXJ1Q92949 421 aa7.96□□□□□ -1.14
LINC00648-201ENST00000553747 PPFIA3O75145 1194 aa7.95□□□□□ -1.14
LINC00648-201ENST00000553747 ZIC2O95409 532 aaPredicted RBP7.95□□□□□ -1.14
LINC00648-201ENST00000553747 SSTR3P32745 418 aaPredicted RBP7.95□□□□□ -1.14
LINC00648-201ENST00000553747 GSK3AP49840 483 aa7.95□□□□□ -1.14
LINC00648-201ENST00000553747 ITPKCQ96DU7 683 aa7.95□□□□□ -1.14
LINC00648-201ENST00000553747 KCNMA1Q12791 1236 aa7.94□□□□□ -1.14
LINC00648-201ENST00000553747 MPNDQ8N594 471 aa7.94□□□□□ -1.14
LINC00648-201ENST00000553747 FAM174AQ8TBP5 190 aa7.94□□□□□ -1.14
LINC00648-201ENST00000553747 NR3C2P08235 984 aa7.92□□□□□ -1.14
LINC00648-201ENST00000553747 MTMR2Q13614 643 aa7.92□□□□□ -1.14
LINC00648-201ENST00000553747 BMP2P12643 396 aa7.91□□□□□ -1.14
LINC00648-201ENST00000553747 BCANQ96GW7 911 aa7.91□□□□□ -1.14
LINC00648-201ENST00000553747 MAP10Q9P2G4 905 aa7.91□□□□□ -1.14
LINC00648-201ENST00000553747 KRT76Q01546 638 aa7.9□□□□□ -1.14
LINC00648-201ENST00000553747 GPR161Q8N6U8 529 aaKnown RBP7.9□□□□□ -1.14
LINC00648-201ENST00000553747 CDK15Q96Q40 435 aa7.9□□□□□ -1.14
LINC00648-201ENST00000553747 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
LINC00648-201ENST00000553747 CNTNAP3BQ96NU0 1288 aa7.89□□□□□ -1.15
LINC00648-201ENST00000553747 CNTNAP3Q9BZ76 1288 aa7.89□□□□□ -1.15
LINC00648-201ENST00000553747 DNMT3LQ9UJW3 386 aa7.89□□□□□ -1.15
LINC00648-201ENST00000553747 AGERQ15109 404 aa7.88□□□□□ -1.15
LINC00648-201ENST00000553747 DESI1Q6ICB0 168 aa7.88□□□□□ -1.15
LINC00648-201ENST00000553747 LYPD8Q6UX82 237 aa7.88□□□□□ -1.15
LINC00648-201ENST00000553747 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
LINC00648-201ENST00000553747 TMEM151AQ8N4L1 468 aa7.88□□□□□ -1.15
LINC00648-201ENST00000553747 ZC3H15Q8WU90 426 aaKnown RBP7.88□□□□□ -1.15
LINC00648-201ENST00000553747 PCDHB15Q9Y5E8 787 aa7.88□□□□□ -1.15
LINC00648-201ENST00000553747 CFAP99D6REC4 459 aa7.87□□□□□ -1.15
LINC00648-201ENST00000553747 GDF11O95390 407 aa7.87□□□□□ -1.15
LINC00648-201ENST00000553747 GRM5P41594 1212 aa7.87□□□□□ -1.15
LINC00648-201ENST00000553747 RASSF7Q02833 373 aa7.87□□□□□ -1.15
LINC00648-201ENST00000553747 TTLL12Q14166 644 aaPredicted RBP7.87□□□□□ -1.15
LINC00648-201ENST00000553747 SOS2Q07890 1332 aaPredicted RBP7.86□□□□□ -1.15
LINC00648-201ENST00000553747 SPDYE5A6NIY4 337 aa7.86□□□□□ -1.15
LINC00648-201ENST00000553747 NR5A1Q13285 461 aa7.86□□□□□ -1.15
LINC00648-201ENST00000553747 ADAMTS8Q9UP79 889 aa7.86□□□□□ -1.15
LINC00648-201ENST00000553747 ZMYND10O75800 440 aa7.85□□□□□ -1.15
LINC00648-201ENST00000553747 UPP2O95045 317 aa7.85□□□□□ -1.15
LINC00648-201ENST00000553747 F12P00748 615 aaPredicted RBP7.85□□□□□ -1.15
LINC00648-201ENST00000553747 BARGINQ6ZT62 677 aa7.85□□□□□ -1.15
LINC00648-201ENST00000553747 MEIOBQ8N635 442 aa7.85□□□□□ -1.15
LINC00648-201ENST00000553747 FIGNL2A6NMB9 653 aa7.84□□□□□ -1.15
LINC00648-201ENST00000553747 BEGAINQ9BUH8 593 aa7.84□□□□□ -1.15
LINC00648-201ENST00000553747 PER1O15534 1290 aaPredicted RBP7.83□□□□□ -1.16
LINC00648-201ENST00000553747 RSBN1LQ6PCB5 846 aaPredicted RBP7.83□□□□□ -1.16
LINC00648-201ENST00000553747 GIGYF2Q6Y7W6 1299 aaKnown RBP7.83□□□□□ -1.16
LINC00648-201ENST00000553747 CABLES1Q8TDN4 633 aa7.83□□□□□ -1.16
LINC00648-201ENST00000553747 TBC1D2Q9BYX2 928 aa7.83□□□□□ -1.16
LINC00648-201ENST00000553747 HRCP23327 699 aa7.82□□□□□ -1.16
LINC00648-201ENST00000553747 FSHRP23945 695 aa7.82□□□□□ -1.16
LINC00648-201ENST00000553747 CSPP1Q1MSJ5 1256 aa7.82□□□□□ -1.16
LINC00648-201ENST00000553747 COL25A1Q9BXS0 654 aaPredicted RBP7.82□□□□□ -1.16
LINC00648-201ENST00000553747 SPTLC1O15269 473 aa7.81□□□□□ -1.16
LINC00648-201ENST00000553747 PTSQ03393 145 aa7.81□□□□□ -1.16
LINC00648-201ENST00000553747 RNFT1Q5M7Z0 435 aa7.81□□□□□ -1.16
LINC00648-201ENST00000553747 WHAMMQ8TF30 809 aa7.81□□□□□ -1.16
LINC00648-201ENST00000553747 TSC1Q92574 1164 aa7.81□□□□□ -1.16
LINC00648-201ENST00000553747 ZNF385CQ66K41 422 aaPredicted RBP7.8□□□□□ -1.16
LINC00648-201ENST00000553747 BPHLQ86WA6 291 aaPredicted RBP7.8□□□□□ -1.16
LINC00648-201ENST00000553747 TTLL8A6PVC2 850 aa7.79□□□□□ -1.16
LINC00648-201ENST00000553747 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.16
LINC00648-201ENST00000553747 VASH1Q7L8A9 365 aaPredicted RBP7.79□□□□□ -1.16
LINC00648-201ENST00000553747 SVOPQ8N4V2 548 aa7.79□□□□□ -1.16
LINC00648-201ENST00000553747 IRS1P35568 1242 aa7.78□□□□□ -1.16
LINC00648-201ENST00000553747 CBLBQ13191 982 aa7.78□□□□□ -1.16
LINC00648-201ENST00000553747 GPAT2Q6NUI2 795 aa7.78□□□□□ -1.16
LINC00648-201ENST00000553747 TSEN34Q9BSV6 310 aaKnown RBP7.78□□□□□ -1.16
LINC00648-201ENST00000553747 ZBTB3Q9H5J0 574 aa7.78□□□□□ -1.16
LINC00648-201ENST00000553747 MAGEB6P1A0A0J9YX57 407 aa7.77□□□□□ -1.17
LINC00648-201ENST00000553747 RNF225M0QZC1 329 aaPredicted RBP7.77□□□□□ -1.17
LINC00648-201ENST00000553747 CCDC155Q8N6L0 562 aa7.77□□□□□ -1.17
LINC00648-201ENST00000553747 C1QTNF2Q9BXJ5 285 aa7.77□□□□□ -1.17
LINC00648-201ENST00000553747 AMHR2Q16671 573 aa7.76□□□□□ -1.17
LINC00648-201ENST00000553747 RIC3Q7Z5B4 369 aa7.76□□□□□ -1.17
LINC00648-201ENST00000553747 CCDC116Q8IYX3 515 aa7.76□□□□□ -1.17
LINC00648-201ENST00000553747 VWA5B2Q8N398 1253 aa7.76□□□□□ -1.17
LINC00648-201ENST00000553747 AK7Q96M32 723 aa7.76□□□□□ -1.17
LINC00648-201ENST00000553747 CARD14Q9BXL6 1004 aa7.76□□□□□ -1.17
LINC00648-201ENST00000553747 CDC14CA4D256 554 aa7.75□□□□□ -1.17
LINC00648-201ENST00000553747 GJA5P36382 358 aa7.75□□□□□ -1.17
LINC00648-201ENST00000553747 EMILIN1Q9Y6C2 1016 aa7.75□□□□□ -1.17
LINC00648-201ENST00000553747 SH3RF1Q7Z6J0 888 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms