RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 NGDNQ8NEJ9 315 aaKnown RBP19■□□□□ 0.63
ABCD4-219ENST00000553745 ESCO1Q5FWF5 840 aa18.99■□□□□ 0.63
ABCD4-219ENST00000553745 PHF8Q9UPP1 1060 aa18.99■□□□□ 0.63
ABCD4-219ENST00000553745 SSH2Q76I76 1423 aa18.99■□□□□ 0.63
ABCD4-219ENST00000553745 FYB1O15117 783 aa18.98■□□□□ 0.63
ABCD4-219ENST00000553745 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
ABCD4-219ENST00000553745 GGNBP2Q9H3C7 697 aa18.98■□□□□ 0.63
ABCD4-219ENST00000553745 MRS2Q9HD23 443 aa18.98■□□□□ 0.63
ABCD4-219ENST00000553745 PIK3C2AO00443 1686 aa18.98■□□□□ 0.63
ABCD4-219ENST00000553745 CADPS2Q86UW7 1296 aa18.98■□□□□ 0.63
ABCD4-219ENST00000553745 ORAI2Q96SN7 254 aa18.98■□□□□ 0.63
ABCD4-219ENST00000553745 NLRP13Q86W25 1043 aa18.97■□□□□ 0.63
ABCD4-219ENST00000553745 BRD4O60885 1362 aaPredicted RBP18.97■□□□□ 0.63
ABCD4-219ENST00000553745 TTC21BQ7Z4L5 1316 aa18.97■□□□□ 0.63
ABCD4-219ENST00000553745 PPP2R1AP30153 589 aa18.96■□□□□ 0.63
ABCD4-219ENST00000553745 MORC1Q86VD1 984 aa18.96■□□□□ 0.63
ABCD4-219ENST00000553745 NME9Q86XW9 330 aa18.96■□□□□ 0.63
ABCD4-219ENST00000553745 TRPM3Q9HCF6 1732 aaPredicted RBP18.95■□□□□ 0.62
ABCD4-219ENST00000553745 MARF1Q9Y4F3 1742 aaKnown RBP18.95■□□□□ 0.62
ABCD4-219ENST00000553745 USP54Q70EL1 1684 aa18.94■□□□□ 0.62
ABCD4-219ENST00000553745 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
ABCD4-219ENST00000553745 OVOS2A0A0J9YW53 1432 aa18.93■□□□□ 0.62
ABCD4-219ENST00000553745 OVOS2Q6IE36 1432 aa18.93■□□□□ 0.62
ABCD4-219ENST00000553745 ZRANB1Q9UGI0 708 aa18.93■□□□□ 0.62
ABCD4-219ENST00000553745 TTC21AQ8NDW8 1320 aa18.92■□□□□ 0.62
ABCD4-219ENST00000553745 MAP2P11137 1827 aaKnown RBP18.91■□□□□ 0.62
ABCD4-219ENST00000553745 FKBP8Q14318 412 aa18.9■□□□□ 0.62
ABCD4-219ENST00000553745 FOXO3O43524 673 aa18.89■□□□□ 0.61
ABCD4-219ENST00000553745 FAM9BQ8IZU0 186 aa18.89■□□□□ 0.61
ABCD4-219ENST00000553745 COG3Q96JB2 828 aa18.88■□□□□ 0.61
ABCD4-219ENST00000553745 ALS2Q96Q42 1657 aa18.87■□□□□ 0.61
ABCD4-219ENST00000553745 XPCQ01831 940 aaPredicted RBP18.87■□□□□ 0.61
ABCD4-219ENST00000553745 PSME1Q06323 249 aa18.87■□□□□ 0.61
ABCD4-219ENST00000553745 SHPRHQ149N8 1683 aa18.87■□□□□ 0.61
ABCD4-219ENST00000553745 USP31Q70CQ4 1352 aa18.86■□□□□ 0.61
ABCD4-219ENST00000553745 PAK3O75914 559 aaPredicted RBP18.86■□□□□ 0.61
ABCD4-219ENST00000553745 NHSL1Q5SYE7 1610 aa18.86■□□□□ 0.61
ABCD4-219ENST00000553745 ZBED9Q6R2W3 1325 aa18.86■□□□□ 0.61
ABCD4-219ENST00000553745 BRINP3Q76B58 766 aa18.86■□□□□ 0.61
ABCD4-219ENST00000553745 SLAIN2Q9P270 581 aa18.86■□□□□ 0.61
ABCD4-219ENST00000553745 DDX17Q92841 729 aaKnown RBP18.85■□□□□ 0.61
ABCD4-219ENST00000553745 PXDNQ92626 1479 aa18.84■□□□□ 0.61
ABCD4-219ENST00000553745 NEFLP07196 543 aa18.84■□□□□ 0.61
ABCD4-219ENST00000553745 PNISRQ8TF01 805 aaKnown RBP18.84■□□□□ 0.61
ABCD4-219ENST00000553745 MTHFSP49914 203 aa18.83■□□□□ 0.61
ABCD4-219ENST00000553745 KRT28Q7Z3Y7 464 aa18.83■□□□□ 0.61
ABCD4-219ENST00000553745 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.61
ABCD4-219ENST00000553745 ROBO1Q9Y6N7 1651 aa18.83■□□□□ 0.61
ABCD4-219ENST00000553745 NPHP3Q7Z494 1330 aa18.83■□□□□ 0.6
ABCD4-219ENST00000553745 FBLN1P23142 703 aa18.83■□□□□ 0.6
ABCD4-219ENST00000553745 AATKQ6ZMQ8 1374 aa18.82■□□□□ 0.6
ABCD4-219ENST00000553745 COL3A1P02461 1466 aaPredicted RBP18.82■□□□□ 0.6
ABCD4-219ENST00000553745 NUTM2GQ5VZR2 741 aa18.82■□□□□ 0.6
ABCD4-219ENST00000553745 ABTB2Q8N961 1025 aa18.82■□□□□ 0.6
ABCD4-219ENST00000553745 NLRP6P59044 892 aa18.81■□□□□ 0.6
ABCD4-219ENST00000553745 PEAK1Q9H792 1746 aa18.81■□□□□ 0.6
ABCD4-219ENST00000553745 LTN1O94822 1766 aa18.79■□□□□ 0.6
ABCD4-219ENST00000553745 POLKQ9UBT6 870 aa18.79■□□□□ 0.6
ABCD4-219ENST00000553745 CDK12Q9NYV4 1490 aaPredicted RBP18.79■□□□□ 0.6
ABCD4-219ENST00000553745 TNS3Q68CZ2 1445 aa18.79■□□□□ 0.6
ABCD4-219ENST00000553745 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
ABCD4-219ENST00000553745 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
ABCD4-219ENST00000553745 SBNO1A3KN83 1393 aa18.78■□□□□ 0.6
ABCD4-219ENST00000553745 SLIT3O75094 1523 aa18.78■□□□□ 0.6
ABCD4-219ENST00000553745 NFAT5O94916 1531 aa18.78■□□□□ 0.6
ABCD4-219ENST00000553745 PHRF1Q9P1Y6 1649 aaKnown RBP18.78■□□□□ 0.6
ABCD4-219ENST00000553745 CRYBG1Q9Y4K1 1723 aa18.78■□□□□ 0.6
ABCD4-219ENST00000553745 SOX12O15370 315 aa18.78■□□□□ 0.6
ABCD4-219ENST00000553745 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
ABCD4-219ENST00000553745 PNPLA6Q8IY17 1366 aa18.76■□□□□ 0.59
ABCD4-219ENST00000553745 MED1Q15648 1581 aaPredicted RBP18.75■□□□□ 0.59
ABCD4-219ENST00000553745 PPM1GO15355 546 aaPredicted RBP18.75■□□□□ 0.59
ABCD4-219ENST00000553745 WDR43Q15061 677 aaKnown RBP eCLIP18.75■□□□□ 0.59
ABCD4-219ENST00000553745 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
ABCD4-219ENST00000553745 AHDC1Q5TGY3 1603 aaPredicted RBP18.74■□□□□ 0.59
ABCD4-219ENST00000553745 BLMP54132 1417 aaPredicted RBP18.73■□□□□ 0.59
ABCD4-219ENST00000553745 IQSEC2Q5JU85 1478 aa18.73■□□□□ 0.59
ABCD4-219ENST00000553745 USP19O94966 1318 aa18.73■□□□□ 0.59
ABCD4-219ENST00000553745 SOS2Q07890 1332 aaPredicted RBP18.73■□□□□ 0.59
ABCD4-219ENST00000553745 INSRP06213 1382 aa18.73■□□□□ 0.59
ABCD4-219ENST00000553745 ABCA3Q99758 1704 aa18.73■□□□□ 0.59
ABCD4-219ENST00000553745 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
ABCD4-219ENST00000553745 ADAMTS8Q9UP79 889 aa18.72■□□□□ 0.59
ABCD4-219ENST00000553745 MAP3K19Q56UN5 1328 aa18.72■□□□□ 0.59
ABCD4-219ENST00000553745 PLEKHG5O94827 1062 aa18.7■□□□□ 0.58
ABCD4-219ENST00000553745 ARHGEF10O15013 1369 aa18.7■□□□□ 0.58
ABCD4-219ENST00000553745 PHLPP1O60346 1717 aa18.7■□□□□ 0.58
ABCD4-219ENST00000553745 FLT4P35916 1363 aa18.68■□□□□ 0.58
ABCD4-219ENST00000553745 ERICH6BQ5W0A0 696 aa18.68■□□□□ 0.58
ABCD4-219ENST00000553745 DIAPH1O60610 1272 aaKnown RBP18.68■□□□□ 0.58
ABCD4-219ENST00000553745 KCNH5Q8NCM2 988 aa18.68■□□□□ 0.58
ABCD4-219ENST00000553745 TOM1O60784 492 aa18.67■□□□□ 0.58
ABCD4-219ENST00000553745 RGPD1P0DJD0 1748 aa18.67■□□□□ 0.58
ABCD4-219ENST00000553745 COL16A1Q07092 1604 aaPredicted RBP18.67■□□□□ 0.58
ABCD4-219ENST00000553745 GCP02774 474 aa18.66■□□□□ 0.58
ABCD4-219ENST00000553745 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
ABCD4-219ENST00000553745 RTL1A6NKG5 1358 aa18.66■□□□□ 0.58
ABCD4-219ENST00000553745 KIF24Q5T7B8 1368 aa18.66■□□□□ 0.58
ABCD4-219ENST00000553745 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
ABCD4-219ENST00000553745 U2SURPO15042 1029 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms