RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 SCAF1Q9H7N4 1312 aaKnown RBP24.91■■□□□ 1.58
PSEN1-208ENST00000553719 NSD3Q9BZ95 1437 aa24.91■■□□□ 1.58
PSEN1-208ENST00000553719 PIK3C2AO00443 1686 aa24.91■■□□□ 1.58
PSEN1-208ENST00000553719 USP54Q70EL1 1684 aa24.91■■□□□ 1.58
PSEN1-208ENST00000553719 XPCQ01831 940 aaPredicted RBP24.9■■□□□ 1.58
PSEN1-208ENST00000553719 PSME1Q06323 249 aa24.9■■□□□ 1.58
PSEN1-208ENST00000553719 TNS3Q68CZ2 1445 aa24.89■■□□□ 1.58
PSEN1-208ENST00000553719 PER1O15534 1290 aaPredicted RBP24.89■■□□□ 1.58
PSEN1-208ENST00000553719 FBXO41Q8TF61 875 aa24.89■■□□□ 1.58
PSEN1-208ENST00000553719 TTC21BQ7Z4L5 1316 aa24.88■■□□□ 1.57
PSEN1-208ENST00000553719 MARF1Q9Y4F3 1742 aaKnown RBP24.88■■□□□ 1.57
PSEN1-208ENST00000553719 SPATA31A3Q5VYP0 1347 aa24.86■■□□□ 1.57
PSEN1-208ENST00000553719 TTC21AQ8NDW8 1320 aa24.86■■□□□ 1.57
PSEN1-208ENST00000553719 KIF20BQ96Q89 1820 aa24.86■■□□□ 1.57
PSEN1-208ENST00000553719 MED1Q15648 1581 aaPredicted RBP24.85■■□□□ 1.57
PSEN1-208ENST00000553719 CRYBG1Q9Y4K1 1723 aa24.85■■□□□ 1.57
PSEN1-208ENST00000553719 COL22A1Q8NFW1 1626 aaPredicted RBP24.84■■□□□ 1.57
PSEN1-208ENST00000553719 DDX10Q13206 875 aaKnown RBP24.84■■□□□ 1.57
PSEN1-208ENST00000553719 USP31Q70CQ4 1352 aa24.82■■□□□ 1.56
PSEN1-208ENST00000553719 SHPRHQ149N8 1683 aa24.82■■□□□ 1.56
PSEN1-208ENST00000553719 OVOS2A0A0J9YW53 1432 aa24.82■■□□□ 1.56
PSEN1-208ENST00000553719 HSPA1LP34931 641 aa24.82■■□□□ 1.56
PSEN1-208ENST00000553719 OVOS2Q6IE36 1432 aa24.82■■□□□ 1.56
PSEN1-208ENST00000553719 ANKRD26Q9UPS8 1709 aa24.81■■□□□ 1.56
PSEN1-208ENST00000553719 ARHGEF10O15013 1369 aa24.8■■□□□ 1.56
PSEN1-208ENST00000553719 AMER1Q5JTC6 1135 aaPredicted RBP24.8■■□□□ 1.56
PSEN1-208ENST00000553719 LRRC59Q96AG4 307 aaKnown RBP24.8■■□□□ 1.56
PSEN1-208ENST00000553719 PNPLA6Q8IY17 1366 aa24.8■■□□□ 1.56
PSEN1-208ENST00000553719 NPC1L1Q9UHC9 1359 aa24.8■■□□□ 1.56
PSEN1-208ENST00000553719 ABCA3Q99758 1704 aa24.79■■□□□ 1.56
PSEN1-208ENST00000553719 NME9Q86XW9 330 aa24.79■■□□□ 1.56
PSEN1-208ENST00000553719 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.79■■□□□ 1.56
PSEN1-208ENST00000553719 FYB1O15117 783 aa24.78■■□□□ 1.56
PSEN1-208ENST00000553719 CGNL1Q0VF96 1302 aa24.78■■□□□ 1.56
PSEN1-208ENST00000553719 NSD2O96028 1365 aa24.78■■□□□ 1.56
PSEN1-208ENST00000553719 SLIT3O75094 1523 aa24.77■■□□□ 1.56
PSEN1-208ENST00000553719 PHRF1Q9P1Y6 1649 aaKnown RBP24.77■■□□□ 1.56
PSEN1-208ENST00000553719 PAK3O75914 559 aaPredicted RBP24.77■■□□□ 1.56
PSEN1-208ENST00000553719 KNSTRNQ9Y448 316 aa24.77■■□□□ 1.56
PSEN1-208ENST00000553719 USP19O94966 1318 aa24.77■■□□□ 1.56
PSEN1-208ENST00000553719 ABTB2Q8N961 1025 aa24.75■■□□□ 1.55
PSEN1-208ENST00000553719 ZRANB1Q9UGI0 708 aa24.74■■□□□ 1.55
PSEN1-208ENST00000553719 JCADQ9P266 1359 aa24.74■■□□□ 1.55
PSEN1-208ENST00000553719 GGNBP2Q9H3C7 697 aa24.72■■□□□ 1.55
PSEN1-208ENST00000553719 NFAT5O94916 1531 aa24.71■■□□□ 1.55
PSEN1-208ENST00000553719 NLRP6P59044 892 aa24.7■■□□□ 1.54
PSEN1-208ENST00000553719 NUTM2GQ5VZR2 741 aa24.69■■□□□ 1.54
PSEN1-208ENST00000553719 NLRP13Q86W25 1043 aa24.69■■□□□ 1.54
PSEN1-208ENST00000553719 LMOD2Q6P5Q4 547 aa24.68■■□□□ 1.54
PSEN1-208ENST00000553719 COG3Q96JB2 828 aa24.66■■□□□ 1.54
PSEN1-208ENST00000553719 PARD3Q8TEW0 1356 aa24.65■■□□□ 1.54
PSEN1-208ENST00000553719 CC2D1BQ5T0F9 858 aaKnown RBP24.63■■□□□ 1.53
PSEN1-208ENST00000553719 CABLES1Q8TDN4 633 aa24.63■■□□□ 1.53
PSEN1-208ENST00000553719 LRP6O75581 1613 aa24.63■■□□□ 1.53
PSEN1-208ENST00000553719 SPATA31A6Q5VVP1 1343 aa24.62■■□□□ 1.53
PSEN1-208ENST00000553719 AATKQ6ZMQ8 1374 aa24.62■■□□□ 1.53
PSEN1-208ENST00000553719 GCP02774 474 aa24.61■■□□□ 1.53
PSEN1-208ENST00000553719 CPDO75976 1380 aa24.6■■□□□ 1.53
PSEN1-208ENST00000553719 KCNH5Q8NCM2 988 aa24.59■■□□□ 1.53
PSEN1-208ENST00000553719 LTN1O94822 1766 aa24.59■■□□□ 1.53
PSEN1-208ENST00000553719 SMG6Q86US8 1419 aaKnown RBP24.59■■□□□ 1.53
PSEN1-208ENST00000553719 MORC1Q86VD1 984 aa24.58■■□□□ 1.53
PSEN1-208ENST00000553719 ABCC6O95255 1503 aa24.57■■□□□ 1.52
PSEN1-208ENST00000553719 PEAK1Q9H792 1746 aa24.57■■□□□ 1.52
PSEN1-208ENST00000553719 COL18A1P39060 1754 aa24.57■■□□□ 1.52
PSEN1-208ENST00000553719 ILDR1Q86SU0 546 aaPredicted RBP24.56■■□□□ 1.52
PSEN1-208ENST00000553719 LMO7Q8WWI1 1683 aa24.56■■□□□ 1.52
PSEN1-208ENST00000553719 FBLN1P23142 703 aa24.55■■□□□ 1.52
PSEN1-208ENST00000553719 PRKRIP1Q9H875 184 aaPredicted RBP24.55■■□□□ 1.52
PSEN1-208ENST00000553719 MAP2P11137 1827 aaKnown RBP24.55■■□□□ 1.52
PSEN1-208ENST00000553719 ARHGEF25Q86VW2 580 aa24.54■■□□□ 1.52
PSEN1-208ENST00000553719 KIAA0232Q92628 1395 aa24.54■■□□□ 1.52
PSEN1-208ENST00000553719 PLEKHG5O94827 1062 aa24.53■■□□□ 1.52
PSEN1-208ENST00000553719 RALBP1Q15311 655 aa24.53■■□□□ 1.52
PSEN1-208ENST00000553719 COL14A1Q05707 1796 aaKnown RBP24.52■■□□□ 1.52
PSEN1-208ENST00000553719 MAP3K19Q56UN5 1328 aa24.52■■□□□ 1.52
PSEN1-208ENST00000553719 SOX12O15370 315 aa24.51■■□□□ 1.51
PSEN1-208ENST00000553719 POLKQ9UBT6 870 aa24.51■■□□□ 1.51
PSEN1-208ENST00000553719 RTL1A6NKG5 1358 aa24.51■■□□□ 1.51
PSEN1-208ENST00000553719 KIF24Q5T7B8 1368 aa24.51■■□□□ 1.51
PSEN1-208ENST00000553719 TNNT2P45379 298 aaPredicted RBP24.5■■□□□ 1.51
PSEN1-208ENST00000553719 CNGB1Q14028 1251 aaPredicted RBP24.5■■□□□ 1.51
PSEN1-208ENST00000553719 RRS1Q15050 365 aaKnown RBP24.5■■□□□ 1.51
PSEN1-208ENST00000553719 PLCH1Q4KWH8 1693 aa24.5■■□□□ 1.51
PSEN1-208ENST00000553719 NUTM2BA6NNL0 878 aaPredicted RBP24.49■■□□□ 1.51
PSEN1-208ENST00000553719 NUTM2EB1AL46 878 aaPredicted RBP24.49■■□□□ 1.51
PSEN1-208ENST00000553719 ZC3H6P61129 1189 aaKnown RBP24.49■■□□□ 1.51
PSEN1-208ENST00000553719 DIEXFQ68CQ4 756 aaKnown RBP24.49■■□□□ 1.51
PSEN1-208ENST00000553719 NUTM2AQ8IVF1 878 aaPredicted RBP24.49■■□□□ 1.51
PSEN1-208ENST00000553719 CDK12Q9NYV4 1490 aaPredicted RBP24.49■■□□□ 1.51
PSEN1-208ENST00000553719 PPP2R1AP30153 589 aa24.48■■□□□ 1.51
PSEN1-208ENST00000553719 HAP1P54257 671 aaPredicted RBP24.48■■□□□ 1.51
PSEN1-208ENST00000553719 EMILIN1Q9Y6C2 1016 aa24.48■■□□□ 1.51
PSEN1-208ENST00000553719 NWD2Q9ULI1 1742 aa24.47■■□□□ 1.51
PSEN1-208ENST00000553719 SLIT2O94813 1529 aa24.46■■□□□ 1.51
PSEN1-208ENST00000553719 FLT4P35916 1363 aa24.46■■□□□ 1.51
PSEN1-208ENST00000553719 NRAPQ86VF7 1730 aa24.46■■□□□ 1.51
PSEN1-208ENST00000553719 CAMTA1Q9Y6Y1 1673 aa24.46■■□□□ 1.51
PSEN1-208ENST00000553719 RGPD5Q99666 1765 aa24.45■■□□□ 1.5
PSEN1-208ENST00000553719 MYBBP1AQ9BQG0 1328 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms