RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 CDK19Q9BWU1 502 aa21.81■■□□□ 1.08
SDR39U1-205ENST00000553546 VPS72Q15906 364 aa21.79■■□□□ 1.08
SDR39U1-205ENST00000553546 CCDC61Q9Y6R9 512 aa21.79■■□□□ 1.08
SDR39U1-205ENST00000553546 CENPJQ9HC77 1338 aaPredicted RBP21.79■■□□□ 1.08
SDR39U1-205ENST00000553546 PAK3O75914 559 aaPredicted RBP21.78■■□□□ 1.08
SDR39U1-205ENST00000553546 L3MBTL2Q969R5 705 aa21.78■■□□□ 1.08
SDR39U1-205ENST00000553546 CRYBG1Q9Y4K1 1723 aa21.77■■□□□ 1.08
SDR39U1-205ENST00000553546 POLR3AO14802 1390 aaPredicted RBP21.77■■□□□ 1.08
SDR39U1-205ENST00000553546 COL14A1Q05707 1796 aaKnown RBP21.77■■□□□ 1.08
SDR39U1-205ENST00000553546 QRICH2Q9H0J4 1663 aa21.75■■□□□ 1.07
SDR39U1-205ENST00000553546 FAM83GA6ND36 823 aa21.75■■□□□ 1.07
SDR39U1-205ENST00000553546 CCDC9Q9Y3X0 531 aaKnown RBP21.75■■□□□ 1.07
SDR39U1-205ENST00000553546 NRAPQ86VF7 1730 aa21.75■■□□□ 1.07
SDR39U1-205ENST00000553546 TRPM1Q7Z4N2 1603 aa21.74■■□□□ 1.07
SDR39U1-205ENST00000553546 PLEKHG3A1L390 1219 aa21.74■■□□□ 1.07
SDR39U1-205ENST00000553546 SIN3AQ96ST3 1273 aa21.73■■□□□ 1.07
SDR39U1-205ENST00000553546 ACEP12821 1306 aa21.73■■□□□ 1.07
SDR39U1-205ENST00000553546 SRPK2P78362 688 aaKnown RBP21.72■■□□□ 1.07
SDR39U1-205ENST00000553546 PHRF1Q9P1Y6 1649 aaKnown RBP21.71■■□□□ 1.07
SDR39U1-205ENST00000553546 NEUROD1Q13562 356 aa21.71■■□□□ 1.07
SDR39U1-205ENST00000553546 NBPF8Q3BBV2 869 aa21.71■■□□□ 1.07
SDR39U1-205ENST00000553546 BTG4Q9NY30 223 aa21.71■■□□□ 1.07
SDR39U1-205ENST00000553546 ONECUT3O60422 494 aaPredicted RBP21.7■■□□□ 1.06
SDR39U1-205ENST00000553546 SEPT12Q8IYM1 358 aa21.7■■□□□ 1.06
SDR39U1-205ENST00000553546 PRDM11Q9NQV5 511 aa21.7■■□□□ 1.06
SDR39U1-205ENST00000553546 PPIP5K1Q6PFW1 1433 aa21.7■■□□□ 1.06
SDR39U1-205ENST00000553546 ROCK2O75116 1388 aaKnown RBP21.69■■□□□ 1.06
SDR39U1-205ENST00000553546 PSDA5PKW4 1024 aaPredicted RBP21.68■■□□□ 1.06
SDR39U1-205ENST00000553546 BRD4O60885 1362 aaPredicted RBP21.68■■□□□ 1.06
SDR39U1-205ENST00000553546 SF3B2Q13435 895 aaKnown RBP21.66■■□□□ 1.06
SDR39U1-205ENST00000553546 CABP2Q9NPB3 220 aa21.66■■□□□ 1.06
SDR39U1-205ENST00000553546 KIAA0232Q92628 1395 aa21.65■■□□□ 1.06
SDR39U1-205ENST00000553546 EVC2Q86UK5 1308 aa21.65■■□□□ 1.06
SDR39U1-205ENST00000553546 A0A0G2JS52 829 aa21.64■■□□□ 1.05
SDR39U1-205ENST00000553546 MYT1Q01538 1121 aa21.64■■□□□ 1.05
SDR39U1-205ENST00000553546 KRT27Q7Z3Y8 459 aa21.64■■□□□ 1.05
SDR39U1-205ENST00000553546 ABTB2Q8N961 1025 aa21.64■■□□□ 1.05
SDR39U1-205ENST00000553546 NRKQ7Z2Y5 1582 aa21.63■■□□□ 1.05
SDR39U1-205ENST00000553546 SPATA31A5Q5VU36 1347 aa21.62■■□□□ 1.05
SDR39U1-205ENST00000553546 SPATA31A7Q8IWB4 1347 aa21.62■■□□□ 1.05
SDR39U1-205ENST00000553546 NUTM2GQ5VZR2 741 aa21.62■■□□□ 1.05
SDR39U1-205ENST00000553546 USP19O94966 1318 aa21.61■■□□□ 1.05
SDR39U1-205ENST00000553546 RGPD1P0DJD0 1748 aa21.61■■□□□ 1.05
SDR39U1-205ENST00000553546 FAM98CQ17RN3 349 aaKnown RBP21.61■■□□□ 1.05
SDR39U1-205ENST00000553546 NLRP13Q86W25 1043 aa21.61■■□□□ 1.05
SDR39U1-205ENST00000553546 ZC3H6P61129 1189 aaKnown RBP21.6■■□□□ 1.05
SDR39U1-205ENST00000553546 USP6P35125 1406 aa21.6■■□□□ 1.05
SDR39U1-205ENST00000553546 CPDO75976 1380 aa21.6■■□□□ 1.05
SDR39U1-205ENST00000553546 CHRNA2Q15822 529 aa21.59■■□□□ 1.05
SDR39U1-205ENST00000553546 TNS1Q9HBL0 1735 aaKnown RBP21.59■■□□□ 1.05
SDR39U1-205ENST00000553546 CABP1Q9NZU7 370 aa21.59■■□□□ 1.05
SDR39U1-205ENST00000553546 THSD7AQ9UPZ6 1657 aa21.58■■□□□ 1.05
SDR39U1-205ENST00000553546 TONSLQ96HA7 1378 aa21.58■■□□□ 1.04
SDR39U1-205ENST00000553546 BAG6P46379 1132 aa21.56■■□□□ 1.04
SDR39U1-205ENST00000553546 STRN4Q9NRL3 753 aa21.56■■□□□ 1.04
SDR39U1-205ENST00000553546 SBNO2Q9Y2G9 1366 aa21.56■■□□□ 1.04
SDR39U1-205ENST00000553546 SPATA31A1Q5TZJ5 1347 aa21.55■■□□□ 1.04
SDR39U1-205ENST00000553546 LMO7Q8WWI1 1683 aa21.54■■□□□ 1.04
SDR39U1-205ENST00000553546 GCP02774 474 aa21.54■■□□□ 1.04
SDR39U1-205ENST00000553546 SSH2Q76I76 1423 aa21.54■■□□□ 1.04
SDR39U1-205ENST00000553546 EVA1CP58658 441 aa21.53■■□□□ 1.04
SDR39U1-205ENST00000553546 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
SDR39U1-205ENST00000553546 ZNF692Q9BU19 519 aaPredicted RBP21.53■■□□□ 1.04
SDR39U1-205ENST00000553546 AKAP12Q02952 1782 aa21.52■■□□□ 1.04
SDR39U1-205ENST00000553546 SLIT3O75094 1523 aa21.52■■□□□ 1.04
SDR39U1-205ENST00000553546 NLRP6P59044 892 aa21.52■■□□□ 1.04
SDR39U1-205ENST00000553546 CARD11Q9BXL7 1154 aa21.52■■□□□ 1.04
SDR39U1-205ENST00000553546 CAMTA1Q9Y6Y1 1673 aa21.52■■□□□ 1.04
SDR39U1-205ENST00000553546 PIK3C2AO00443 1686 aa21.5■■□□□ 1.03
SDR39U1-205ENST00000553546 DISP2A7MBM2 1401 aa21.5■■□□□ 1.03
SDR39U1-205ENST00000553546 EN1Q05925 392 aaPredicted RBP21.5■■□□□ 1.03
SDR39U1-205ENST00000553546 R3HDM1Q15032 1099 aaKnown RBP21.5■■□□□ 1.03
SDR39U1-205ENST00000553546 BARGINQ6ZT62 677 aa21.49■■□□□ 1.03
SDR39U1-205ENST00000553546 TTC21AQ8NDW8 1320 aa21.48■■□□□ 1.03
SDR39U1-205ENST00000553546 CPSF1Q10570 1443 aaKnown RBP21.47■■□□□ 1.03
SDR39U1-205ENST00000553546 COL5A2P05997 1499 aaPredicted RBP21.47■■□□□ 1.03
SDR39U1-205ENST00000553546 AATKQ6ZMQ8 1374 aa21.47■■□□□ 1.03
SDR39U1-205ENST00000553546 FAM182BQ5T319 152 aa21.46■■□□□ 1.03
SDR39U1-205ENST00000553546 LARP1Q6PKG0 1096 aaKnown RBP21.46■■□□□ 1.03
SDR39U1-205ENST00000553546 TCP11L2Q8N4U5 519 aa21.46■■□□□ 1.03
SDR39U1-205ENST00000553546 USP35Q9P2H5 1018 aa21.46■■□□□ 1.03
SDR39U1-205ENST00000553546 THRAP3Q9Y2W1 955 aaKnown RBP21.46■■□□□ 1.03
SDR39U1-205ENST00000553546 TTC21BQ7Z4L5 1316 aa21.46■■□□□ 1.03
SDR39U1-205ENST00000553546 KTN1Q86UP2 1357 aaKnown RBP21.45■■□□□ 1.02
SDR39U1-205ENST00000553546 MON2Q7Z3U7 1717 aa21.44■■□□□ 1.02
SDR39U1-205ENST00000553546 KCNH5Q8NCM2 988 aa21.44■■□□□ 1.02
SDR39U1-205ENST00000553546 RREB1Q92766 1687 aa21.44■■□□□ 1.02
SDR39U1-205ENST00000553546 FAM196AQ6ZSG2 479 aa21.43■■□□□ 1.02
SDR39U1-205ENST00000553546 CRB1P82279 1406 aa21.43■■□□□ 1.02
SDR39U1-205ENST00000553546 ZBTB7CA1YPR0 619 aa21.42■■□□□ 1.02
SDR39U1-205ENST00000553546 NUP188Q5SRE5 1749 aa21.41■■□□□ 1.02
SDR39U1-205ENST00000553546 PDE3BQ13370 1112 aa21.41■■□□□ 1.02
SDR39U1-205ENST00000553546 PARP4Q9UKK3 1724 aaKnown RBP21.41■■□□□ 1.02
SDR39U1-205ENST00000553546 EZH2Q15910 746 aaKnown RBP21.4■■□□□ 1.02
SDR39U1-205ENST00000553546 COL18A1P39060 1754 aa21.4■■□□□ 1.02
SDR39U1-205ENST00000553546 SLC24A1O60721 1099 aa21.39■■□□□ 1.01
SDR39U1-205ENST00000553546 PUS7Q96PZ0 661 aaKnown RBP21.39■■□□□ 1.01
SDR39U1-205ENST00000553546 YY1P25490 414 aa21.38■■□□□ 1.01
SDR39U1-205ENST00000553546 HDGFL2Q7Z4V5 671 aaPredicted RBP21.38■■□□□ 1.01
SDR39U1-205ENST00000553546 ABCC6O95255 1503 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms