RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 C14orf93Q9H972 538 aaKnown RBP10.17□□□□□ -0.78
RDH11-203ENST00000553384 PLCH1Q4KWH8 1693 aa10.17□□□□□ -0.78
RDH11-203ENST00000553384 LMOD2Q6P5Q4 547 aa10.17□□□□□ -0.78
RDH11-203ENST00000553384 BTG4Q9NY30 223 aa10.17□□□□□ -0.78
RDH11-203ENST00000553384 ANKARQ7Z5J8 1434 aa10.16□□□□□ -0.78
RDH11-203ENST00000553384 SPATA31A5Q5VU36 1347 aa10.16□□□□□ -0.78
RDH11-203ENST00000553384 SPATA31A7Q8IWB4 1347 aa10.16□□□□□ -0.78
RDH11-203ENST00000553384 R3HDM1Q15032 1099 aaKnown RBP10.15□□□□□ -0.78
RDH11-203ENST00000553384 PARD3Q8TEW0 1356 aa10.15□□□□□ -0.78
RDH11-203ENST00000553384 RGPD1P0DJD0 1748 aa10.14□□□□□ -0.79
RDH11-203ENST00000553384 FAM196AQ6ZSG2 479 aa10.14□□□□□ -0.79
RDH11-203ENST00000553384 TONSLQ96HA7 1378 aa10.14□□□□□ -0.79
RDH11-203ENST00000553384 GPRASP1Q5JY77 1395 aa10.13□□□□□ -0.79
RDH11-203ENST00000553384 L3MBTL2Q969R5 705 aa10.13□□□□□ -0.79
RDH11-203ENST00000553384 CAMKK2Q96RR4 588 aa10.13□□□□□ -0.79
RDH11-203ENST00000553384 ABCA3Q99758 1704 aa10.13□□□□□ -0.79
RDH11-203ENST00000553384 NRAPQ86VF7 1730 aa10.13□□□□□ -0.79
RDH11-203ENST00000553384 EIF3AQ14152 1382 aaKnown RBP10.13□□□□□ -0.79
RDH11-203ENST00000553384 PRAM1Q96QH2 718 aa10.13□□□□□ -0.79
RDH11-203ENST00000553384 COL14A1Q05707 1796 aaKnown RBP10.12□□□□□ -0.79
RDH11-203ENST00000553384 EZH2Q15910 746 aaKnown RBP10.12□□□□□ -0.79
RDH11-203ENST00000553384 PMFBP1Q8TBY8 1022 aa10.12□□□□□ -0.79
RDH11-203ENST00000553384 POGKQ9P215 609 aa10.12□□□□□ -0.79
RDH11-203ENST00000553384 TRAK1Q9UPV9 953 aa10.12□□□□□ -0.79
RDH11-203ENST00000553384 RGPD8O14715 1765 aaPredicted RBP10.11□□□□□ -0.79
RDH11-203ENST00000553384 PLEKHG5O94827 1062 aa10.11□□□□□ -0.79
RDH11-203ENST00000553384 SAFB2Q14151 953 aaKnown RBP eCLIP10.11□□□□□ -0.79
RDH11-203ENST00000553384 DLC1Q96QB1 1528 aa10.11□□□□□ -0.79
RDH11-203ENST00000553384 YY1P25490 414 aa10.11□□□□□ -0.79
RDH11-203ENST00000553384 ADGRB2O60241 1585 aa10.11□□□□□ -0.79
RDH11-203ENST00000553384 THSD7AQ9UPZ6 1657 aa10.1□□□□□ -0.79
RDH11-203ENST00000553384 SPATA31A1Q5TZJ5 1347 aa10.1□□□□□ -0.79
RDH11-203ENST00000553384 FAM182BQ5T319 152 aa10.1□□□□□ -0.79
RDH11-203ENST00000553384 PRDM11Q9NQV5 511 aa10.1□□□□□ -0.79
RDH11-203ENST00000553384 TRIM37O94972 964 aa10.09□□□□□ -0.79
RDH11-203ENST00000553384 NBPF8Q3BBV2 869 aa10.09□□□□□ -0.79
RDH11-203ENST00000553384 NBPF14Q5TI25 921 aa10.09□□□□□ -0.79
RDH11-203ENST00000553384 TRPM3Q9HCF6 1732 aaPredicted RBP10.09□□□□□ -0.79
RDH11-203ENST00000553384 ALS2Q96Q42 1657 aa10.09□□□□□ -0.79
RDH11-203ENST00000553384 DCAF8L1A6NGE4 600 aa10.09□□□□□ -0.79
RDH11-203ENST00000553384 APBA3O96018 575 aa10.09□□□□□ -0.79
RDH11-203ENST00000553384 BARGINQ6ZT62 677 aa10.09□□□□□ -0.79
RDH11-203ENST00000553384 ADGRB1O14514 1584 aa10.09□□□□□ -0.79
RDH11-203ENST00000553384 TNS1Q9HBL0 1735 aaKnown RBP10.08□□□□□ -0.8
RDH11-203ENST00000553384 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
RDH11-203ENST00000553384 DDX10Q13206 875 aaKnown RBP10.08□□□□□ -0.8
RDH11-203ENST00000553384 NBPF1Q3BBV0 1214 aa10.07□□□□□ -0.8
RDH11-203ENST00000553384 NGDNQ8NEJ9 315 aaKnown RBP10.07□□□□□ -0.8
RDH11-203ENST00000553384 WASLO00401 505 aaPredicted RBP10.07□□□□□ -0.8
RDH11-203ENST00000553384 SPON1Q9HCB6 807 aa10.07□□□□□ -0.8
RDH11-203ENST00000553384 KIAA1210Q9ULL0 1709 aa10.07□□□□□ -0.8
RDH11-203ENST00000553384 PRR36Q9H6K5 1346 aa10.06□□□□□ -0.8
RDH11-203ENST00000553384 TULP4Q9NRJ4 1543 aa10.06□□□□□ -0.8
RDH11-203ENST00000553384 PDE3BQ13370 1112 aa10.06□□□□□ -0.8
RDH11-203ENST00000553384 HIRIP3Q9BW71 556 aaPredicted RBP10.06□□□□□ -0.8
RDH11-203ENST00000553384 ROCK2O75116 1388 aaKnown RBP10.06□□□□□ -0.8
RDH11-203ENST00000553384 MINK1Q8N4C8 1332 aaPredicted RBP10.06□□□□□ -0.8
RDH11-203ENST00000553384 PAK3O75914 559 aaPredicted RBP10.05□□□□□ -0.8
RDH11-203ENST00000553384 KIAA0232Q92628 1395 aa10.05□□□□□ -0.8
RDH11-203ENST00000553384 NINLQ9Y2I6 1382 aa10.05□□□□□ -0.8
RDH11-203ENST00000553384 KCNQ2O43526 872 aa10.05□□□□□ -0.8
RDH11-203ENST00000553384 THRAP3Q9Y2W1 955 aaKnown RBP10.05□□□□□ -0.8
RDH11-203ENST00000553384 EVA1CP58658 441 aa10.04□□□□□ -0.8
RDH11-203ENST00000553384 STRN4Q9NRL3 753 aa10.04□□□□□ -0.8
RDH11-203ENST00000553384 PPP1R1BQ9UD71 204 aaPredicted RBP10.04□□□□□ -0.8
RDH11-203ENST00000553384 ATP7BP35670 1465 aa10.04□□□□□ -0.8
RDH11-203ENST00000553384 CRYBG1Q9Y4K1 1723 aa10.04□□□□□ -0.8
RDH11-203ENST00000553384 TCP11L2Q8N4U5 519 aa10.03□□□□□ -0.8
RDH11-203ENST00000553384 CHRNA2Q15822 529 aa10.03□□□□□ -0.8
RDH11-203ENST00000553384 RREB1Q92766 1687 aa10.02□□□□□ -0.8
RDH11-203ENST00000553384 PLSCR1O15162 318 aa10.02□□□□□ -0.81
RDH11-203ENST00000553384 SSH2Q76I76 1423 aa10.02□□□□□ -0.81
RDH11-203ENST00000553384 ARHGEF28Q8N1W1 1705 aaKnown RBP10.02□□□□□ -0.81
RDH11-203ENST00000553384 CARD11Q9BXL7 1154 aa10.02□□□□□ -0.81
RDH11-203ENST00000553384 TRPM1Q7Z4N2 1603 aa10.02□□□□□ -0.81
RDH11-203ENST00000553384 CENPJQ9HC77 1338 aaPredicted RBP10.02□□□□□ -0.81
RDH11-203ENST00000553384 CPDO75976 1380 aa10.02□□□□□ -0.81
RDH11-203ENST00000553384 ZC3H6P61129 1189 aaKnown RBP10.01□□□□□ -0.81
RDH11-203ENST00000553384 NUDT16Q96DE0 195 aaKnown RBP10.01□□□□□ -0.81
RDH11-203ENST00000553384 USP35Q9P2H5 1018 aa10.01□□□□□ -0.81
RDH11-203ENST00000553384 ADRA2BP18089 450 aa10.01□□□□□ -0.81
RDH11-203ENST00000553384 POLR3AO14802 1390 aaPredicted RBP10□□□□□ -0.81
RDH11-203ENST00000553384 NUP188Q5SRE5 1749 aa10□□□□□ -0.81
RDH11-203ENST00000553384 PLEKHG3A1L390 1219 aa9.99□□□□□ -0.81
RDH11-203ENST00000553384 LARP1Q6PKG0 1096 aaKnown RBP9.99□□□□□ -0.81
RDH11-203ENST00000553384 CCDC61Q9Y6R9 512 aa9.99□□□□□ -0.81
RDH11-203ENST00000553384 SRPK2P78362 688 aaKnown RBP9.99□□□□□ -0.81
RDH11-203ENST00000553384 CAMTA1Q9Y6Y1 1673 aa9.98□□□□□ -0.81
RDH11-203ENST00000553384 ANP32CO43423 234 aa9.98□□□□□ -0.81
RDH11-203ENST00000553384 CACNB1Q02641 598 aaPredicted RBP9.98□□□□□ -0.81
RDH11-203ENST00000553384 CDK19Q9BWU1 502 aa9.98□□□□□ -0.81
RDH11-203ENST00000553384 USP19O94966 1318 aa9.98□□□□□ -0.81
RDH11-203ENST00000553384 PHRF1Q9P1Y6 1649 aaKnown RBP9.98□□□□□ -0.81
RDH11-203ENST00000553384 ITSN1Q15811 1721 aa9.98□□□□□ -0.81
RDH11-203ENST00000553384 CCER2I3L3R5 266 aa9.97□□□□□ -0.81
RDH11-203ENST00000553384 NLRP13Q86W25 1043 aa9.97□□□□□ -0.81
RDH11-203ENST00000553384 ABTB2Q8N961 1025 aa9.97□□□□□ -0.81
RDH11-203ENST00000553384 ACEP12821 1306 aa9.97□□□□□ -0.81
RDH11-203ENST00000553384 OVOS2A0A0G2JMS6 1433 aa9.97□□□□□ -0.81
RDH11-203ENST00000553384 OVOS2A0A0J9YW53 1432 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 1132.6 ms