RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 CABP2Q9NPB3 220 aa18.71■□□□□ 0.59
HNRNPC-205ENST00000553300 PPIP5K1Q6PFW1 1433 aa18.7■□□□□ 0.58
HNRNPC-205ENST00000553300 BRD4O60885 1362 aaPredicted RBP18.69■□□□□ 0.58
HNRNPC-205ENST00000553300 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.69■□□□□ 0.58
HNRNPC-205ENST00000553300 GJD4Q96KN9 370 aaPredicted RBP18.68■□□□□ 0.58
HNRNPC-205ENST00000553300 RALGAPBQ86X10 1494 aa18.68■□□□□ 0.58
HNRNPC-205ENST00000553300 ABCA3Q99758 1704 aa18.68■□□□□ 0.58
HNRNPC-205ENST00000553300 RGS12O14924 1447 aa18.68■□□□□ 0.58
HNRNPC-205ENST00000553300 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
HNRNPC-205ENST00000553300 PLEKHG5O94827 1062 aa18.68■□□□□ 0.58
HNRNPC-205ENST00000553300 CLSPNQ9HAW4 1339 aa18.67■□□□□ 0.58
HNRNPC-205ENST00000553300 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
HNRNPC-205ENST00000553300 CABP1Q9NZU7 370 aa18.66■□□□□ 0.58
HNRNPC-205ENST00000553300 NWD2Q9ULI1 1742 aa18.66■□□□□ 0.58
HNRNPC-205ENST00000553300 ABTB2Q8N961 1025 aa18.65■□□□□ 0.58
HNRNPC-205ENST00000553300 TIMELESSQ9UNS1 1208 aa18.65■□□□□ 0.58
HNRNPC-205ENST00000553300 SLC24A1O60721 1099 aa18.64■□□□□ 0.57
HNRNPC-205ENST00000553300 VPS72Q15906 364 aa18.64■□□□□ 0.57
HNRNPC-205ENST00000553300 UPF1Q92900 1129 aaKnown RBP eCLIP18.64■□□□□ 0.57
HNRNPC-205ENST00000553300 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.57
HNRNPC-205ENST00000553300 ATAD2Q6PL18 1390 aa18.63■□□□□ 0.57
HNRNPC-205ENST00000553300 NLRP13Q86W25 1043 aa18.62■□□□□ 0.57
HNRNPC-205ENST00000553300 COL14A1Q05707 1796 aaKnown RBP18.62■□□□□ 0.57
HNRNPC-205ENST00000553300 PLCH1Q4KWH8 1693 aa18.61■□□□□ 0.57
HNRNPC-205ENST00000553300 PCGF6Q9BYE7 350 aa18.61■□□□□ 0.57
HNRNPC-205ENST00000553300 PRDM11Q9NQV5 511 aa18.61■□□□□ 0.57
HNRNPC-205ENST00000553300 BTG4Q9NY30 223 aa18.61■□□□□ 0.57
HNRNPC-205ENST00000553300 CRYBG1Q9Y4K1 1723 aa18.61■□□□□ 0.57
HNRNPC-205ENST00000553300 USP6P35125 1406 aa18.59■□□□□ 0.57
HNRNPC-205ENST00000553300 NUTM2GQ5VZR2 741 aa18.59■□□□□ 0.57
HNRNPC-205ENST00000553300 PUS7Q96PZ0 661 aaKnown RBP18.59■□□□□ 0.57
HNRNPC-205ENST00000553300 CCDC9Q9Y3X0 531 aaKnown RBP18.58■□□□□ 0.57
HNRNPC-205ENST00000553300 ONECUT3O60422 494 aaPredicted RBP18.57■□□□□ 0.56
HNRNPC-205ENST00000553300 GLI3P10071 1580 aa18.57■□□□□ 0.56
HNRNPC-205ENST00000553300 USP19O94966 1318 aa18.57■□□□□ 0.56
HNRNPC-205ENST00000553300 KIAA0232Q92628 1395 aa18.56■□□□□ 0.56
HNRNPC-205ENST00000553300 PHRF1Q9P1Y6 1649 aaKnown RBP18.56■□□□□ 0.56
HNRNPC-205ENST00000553300 SSH2Q76I76 1423 aa18.56■□□□□ 0.56
HNRNPC-205ENST00000553300 ZC3H6P61129 1189 aaKnown RBP18.55■□□□□ 0.56
HNRNPC-205ENST00000553300 CPDO75976 1380 aa18.55■□□□□ 0.56
HNRNPC-205ENST00000553300 GCP02774 474 aa18.55■□□□□ 0.56
HNRNPC-205ENST00000553300 NLRP6P59044 892 aa18.55■□□□□ 0.56
HNRNPC-205ENST00000553300 CPSF1Q10570 1443 aaKnown RBP18.54■□□□□ 0.56
HNRNPC-205ENST00000553300 NRAPQ86VF7 1730 aa18.54■□□□□ 0.56
HNRNPC-205ENST00000553300 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
HNRNPC-205ENST00000553300 ST20-MTHFSA0A0A6YYL1 179 aa18.53■□□□□ 0.56
HNRNPC-205ENST00000553300 CCDC125Q86Z20 511 aa18.53■□□□□ 0.56
HNRNPC-205ENST00000553300 SEPT12Q8IYM1 358 aa18.53■□□□□ 0.56
HNRNPC-205ENST00000553300 TTC21BQ7Z4L5 1316 aa18.52■□□□□ 0.56
HNRNPC-205ENST00000553300 AKAP12Q02952 1782 aa18.52■□□□□ 0.56
HNRNPC-205ENST00000553300 KTN1Q86UP2 1357 aaKnown RBP18.52■□□□□ 0.56
HNRNPC-205ENST00000553300 CHRNA2Q15822 529 aa18.52■□□□□ 0.55
HNRNPC-205ENST00000553300 TESK2Q96S53 571 aa18.52■□□□□ 0.55
HNRNPC-205ENST00000553300 EP400Q96L91 3159 aa18.51■□□□□ 0.55
HNRNPC-205ENST00000553300 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
HNRNPC-205ENST00000553300 SPATA31A5Q5VU36 1347 aa18.51■□□□□ 0.55
HNRNPC-205ENST00000553300 SPATA31A7Q8IWB4 1347 aa18.51■□□□□ 0.55
HNRNPC-205ENST00000553300 HDGFL2Q7Z4V5 671 aaPredicted RBP18.5■□□□□ 0.55
HNRNPC-205ENST00000553300 TMC1Q8TDI8 760 aa18.5■□□□□ 0.55
HNRNPC-205ENST00000553300 TERF2IPQ9NYB0 399 aa18.5■□□□□ 0.55
HNRNPC-205ENST00000553300 EVA1CP58658 441 aa18.49■□□□□ 0.55
HNRNPC-205ENST00000553300 KCNH5Q8NCM2 988 aa18.49■□□□□ 0.55
HNRNPC-205ENST00000553300 NINLQ9Y2I6 1382 aa18.49■□□□□ 0.55
HNRNPC-205ENST00000553300 FAM98CQ17RN3 349 aaKnown RBP18.48■□□□□ 0.55
HNRNPC-205ENST00000553300 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
HNRNPC-205ENST00000553300 SLIT3O75094 1523 aa18.47■□□□□ 0.55
HNRNPC-205ENST00000553300 PIK3C2AO00443 1686 aa18.47■□□□□ 0.55
HNRNPC-205ENST00000553300 KRT27Q7Z3Y8 459 aa18.47■□□□□ 0.55
HNRNPC-205ENST00000553300 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
HNRNPC-205ENST00000553300 USP47Q96K76 1375 aa18.47■□□□□ 0.55
HNRNPC-205ENST00000553300 A0A0G2JS52 829 aa18.46■□□□□ 0.55
HNRNPC-205ENST00000553300 MYT1Q01538 1121 aa18.46■□□□□ 0.55
HNRNPC-205ENST00000553300 SLC12A5Q9H2X9 1139 aa18.46■□□□□ 0.55
HNRNPC-205ENST00000553300 SPATA31A1Q5TZJ5 1347 aa18.46■□□□□ 0.55
HNRNPC-205ENST00000553300 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
HNRNPC-205ENST00000553300 BRWD3Q6RI45 1802 aa18.46■□□□□ 0.55
HNRNPC-205ENST00000553300 TMF1P82094 1093 aa18.45■□□□□ 0.54
HNRNPC-205ENST00000553300 AATKQ6ZMQ8 1374 aa18.45■□□□□ 0.54
HNRNPC-205ENST00000553300 CAMTA1Q9Y6Y1 1673 aa18.45■□□□□ 0.54
HNRNPC-205ENST00000553300 CDCA8Q53HL2 280 aa18.44■□□□□ 0.54
HNRNPC-205ENST00000553300 CD163L1Q9NR16 1453 aa18.44■□□□□ 0.54
HNRNPC-205ENST00000553300 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
HNRNPC-205ENST00000553300 EDC4Q6P2E9 1401 aaKnown RBP18.43■□□□□ 0.54
HNRNPC-205ENST00000553300 USP31Q70CQ4 1352 aa18.43■□□□□ 0.54
HNRNPC-205ENST00000553300 BARGINQ6ZT62 677 aa18.42■□□□□ 0.54
HNRNPC-205ENST00000553300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
HNRNPC-205ENST00000553300 THRAP3Q9Y2W1 955 aaKnown RBP18.42■□□□□ 0.54
HNRNPC-205ENST00000553300 ARHGEF25Q86VW2 580 aa18.42■□□□□ 0.54
HNRNPC-205ENST00000553300 BLMP54132 1417 aaPredicted RBP18.41■□□□□ 0.54
HNRNPC-205ENST00000553300 A0A1W2PP64 1363 aa18.41■□□□□ 0.54
HNRNPC-205ENST00000553300 ZBTB7CA1YPR0 619 aa18.41■□□□□ 0.54
HNRNPC-205ENST00000553300 LARP1Q6PKG0 1096 aaKnown RBP18.41■□□□□ 0.54
HNRNPC-205ENST00000553300 TCP11L2Q8N4U5 519 aa18.41■□□□□ 0.54
HNRNPC-205ENST00000553300 COL5A2P05997 1499 aaPredicted RBP18.4■□□□□ 0.54
HNRNPC-205ENST00000553300 SF3B2Q13435 895 aaKnown RBP18.4■□□□□ 0.54
HNRNPC-205ENST00000553300 USP35Q9P2H5 1018 aa18.4■□□□□ 0.54
HNRNPC-205ENST00000553300 THSD7AQ9UPZ6 1657 aa18.39■□□□□ 0.53
HNRNPC-205ENST00000553300 CRB1P82279 1406 aa18.38■□□□□ 0.53
HNRNPC-205ENST00000553300 USP54Q70EL1 1684 aa18.37■□□□□ 0.53
HNRNPC-205ENST00000553300 NME9Q86XW9 330 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms