RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 UTRNP46939 3433 aa11.97□□□□□ -0.49
PCNX1-203ENST00000553272 ALS2Q96Q42 1657 aa11.97□□□□□ -0.49
PCNX1-203ENST00000553272 PPP1R1BQ9UD71 204 aaPredicted RBP11.96□□□□□ -0.49
PCNX1-203ENST00000553272 CASZ1Q86V15 1759 aa11.96□□□□□ -0.49
PCNX1-203ENST00000553272 SPATA31A5Q5VU36 1347 aa11.95□□□□□ -0.5
PCNX1-203ENST00000553272 SPATA31A7Q8IWB4 1347 aa11.95□□□□□ -0.5
PCNX1-203ENST00000553272 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
PCNX1-203ENST00000553272 TRIM37O94972 964 aa11.94□□□□□ -0.5
PCNX1-203ENST00000553272 CFAP70Q5T0N1 1121 aa11.94□□□□□ -0.5
PCNX1-203ENST00000553272 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
PCNX1-203ENST00000553272 PRAM1Q96QH2 718 aa11.94□□□□□ -0.5
PCNX1-203ENST00000553272 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
PCNX1-203ENST00000553272 DHX57Q6P158 1386 aaKnown RBP11.93□□□□□ -0.5
PCNX1-203ENST00000553272 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCNX1-203ENST00000553272 CAMKK2Q96RR4 588 aa11.93□□□□□ -0.5
PCNX1-203ENST00000553272 MPHOSPH9Q99550 1183 aa11.93□□□□□ -0.5
PCNX1-203ENST00000553272 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
PCNX1-203ENST00000553272 ZNF784Q8NCA9 323 aaPredicted RBP11.92□□□□□ -0.5
PCNX1-203ENST00000553272 PHRF1Q9P1Y6 1649 aaKnown RBP11.92□□□□□ -0.5
PCNX1-203ENST00000553272 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
PCNX1-203ENST00000553272 DLC1Q96QB1 1528 aa11.91□□□□□ -0.5
PCNX1-203ENST00000553272 ACIN1Q9UKV3 1341 aaKnown RBP11.9□□□□□ -0.5
PCNX1-203ENST00000553272 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.5
PCNX1-203ENST00000553272 APBA3O96018 575 aa11.9□□□□□ -0.5
PCNX1-203ENST00000553272 GPRASP1Q5JY77 1395 aa11.9□□□□□ -0.5
PCNX1-203ENST00000553272 SPATA31A1Q5TZJ5 1347 aa11.89□□□□□ -0.51
PCNX1-203ENST00000553272 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
PCNX1-203ENST00000553272 FAM196AQ6ZSG2 479 aa11.89□□□□□ -0.51
PCNX1-203ENST00000553272 POGKQ9P215 609 aa11.89□□□□□ -0.51
PCNX1-203ENST00000553272 RGPD3A6NKT7 1758 aaPredicted RBP11.88□□□□□ -0.51
PCNX1-203ENST00000553272 RGPD4Q7Z3J3 1758 aa11.88□□□□□ -0.51
PCNX1-203ENST00000553272 PARD3Q8TEW0 1356 aa11.88□□□□□ -0.51
PCNX1-203ENST00000553272 HIRIP3Q9BW71 556 aaPredicted RBP11.87□□□□□ -0.51
PCNX1-203ENST00000553272 SPON1Q9HCB6 807 aa11.87□□□□□ -0.51
PCNX1-203ENST00000553272 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
PCNX1-203ENST00000553272 KCNQ2O43526 872 aa11.86□□□□□ -0.51
PCNX1-203ENST00000553272 ADGRB1O14514 1584 aa11.86□□□□□ -0.51
PCNX1-203ENST00000553272 CEP350Q5VT06 3117 aa11.86□□□□□ -0.51
PCNX1-203ENST00000553272 TULP4Q9NRJ4 1543 aa11.86□□□□□ -0.51
PCNX1-203ENST00000553272 KIAA0232Q92628 1395 aa11.85□□□□□ -0.51
PCNX1-203ENST00000553272 WASLO00401 505 aaPredicted RBP11.85□□□□□ -0.51
PCNX1-203ENST00000553272 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
PCNX1-203ENST00000553272 WNK3Q9BYP7 1800 aa11.85□□□□□ -0.51
PCNX1-203ENST00000553272 MINK1Q8N4C8 1332 aaPredicted RBP11.85□□□□□ -0.51
PCNX1-203ENST00000553272 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
PCNX1-203ENST00000553272 EIF3AQ14152 1382 aaKnown RBP11.84□□□□□ -0.51
PCNX1-203ENST00000553272 PARP4Q9UKK3 1724 aaKnown RBP11.84□□□□□ -0.51
PCNX1-203ENST00000553272 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
PCNX1-203ENST00000553272 C1QTNF8P60827 252 aa11.84□□□□□ -0.51
PCNX1-203ENST00000553272 CHRNA2Q15822 529 aa11.84□□□□□ -0.51
PCNX1-203ENST00000553272 BARGINQ6ZT62 677 aa11.84□□□□□ -0.51
PCNX1-203ENST00000553272 NGDNQ8NEJ9 315 aaKnown RBP11.84□□□□□ -0.51
PCNX1-203ENST00000553272 NBPF8Q3BBV2 869 aa11.83□□□□□ -0.52
PCNX1-203ENST00000553272 NBPF14Q5TI25 921 aa11.83□□□□□ -0.52
PCNX1-203ENST00000553272 STRN4Q9NRL3 753 aa11.83□□□□□ -0.52
PCNX1-203ENST00000553272 USP35Q9P2H5 1018 aa11.83□□□□□ -0.52
PCNX1-203ENST00000553272 PEAK1Q9H792 1746 aa11.83□□□□□ -0.52
PCNX1-203ENST00000553272 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
PCNX1-203ENST00000553272 ZC3H6P61129 1189 aaKnown RBP11.82□□□□□ -0.52
PCNX1-203ENST00000553272 PDGFDQ9GZP0 370 aaPredicted RBP11.82□□□□□ -0.52
PCNX1-203ENST00000553272 ITSN1Q15811 1721 aa11.82□□□□□ -0.52
PCNX1-203ENST00000553272 PDE3BQ13370 1112 aa11.81□□□□□ -0.52
PCNX1-203ENST00000553272 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
PCNX1-203ENST00000553272 SSH2Q76I76 1423 aa11.8□□□□□ -0.52
PCNX1-203ENST00000553272 ZBTB7AO95365 584 aa11.8□□□□□ -0.52
PCNX1-203ENST00000553272 SHANK3Q9BYB0 1731 aa11.8□□□□□ -0.52
PCNX1-203ENST00000553272 ATP7BP35670 1465 aa11.79□□□□□ -0.52
PCNX1-203ENST00000553272 EVA1CP58658 441 aa11.79□□□□□ -0.52
PCNX1-203ENST00000553272 LARP1Q6PKG0 1096 aaKnown RBP11.79□□□□□ -0.52
PCNX1-203ENST00000553272 TCP11L2Q8N4U5 519 aa11.79□□□□□ -0.52
PCNX1-203ENST00000553272 NUDT16Q96DE0 195 aaKnown RBP11.79□□□□□ -0.52
PCNX1-203ENST00000553272 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
PCNX1-203ENST00000553272 NUTM2GQ5VZR2 741 aa11.78□□□□□ -0.52
PCNX1-203ENST00000553272 POLR3AO14802 1390 aaPredicted RBP11.78□□□□□ -0.52
PCNX1-203ENST00000553272 THRAP3Q9Y2W1 955 aaKnown RBP11.77□□□□□ -0.53
PCNX1-203ENST00000553272 CPDO75976 1380 aa11.77□□□□□ -0.53
PCNX1-203ENST00000553272 KAT6BQ8WYB5 2073 aa11.76□□□□□ -0.53
PCNX1-203ENST00000553272 TOPAZ1Q8N9V7 1692 aa11.76□□□□□ -0.53
PCNX1-203ENST00000553272 FHDC1Q9C0D6 1143 aaPredicted RBP11.76□□□□□ -0.53
PCNX1-203ENST00000553272 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
PCNX1-203ENST00000553272 KDM2AQ9Y2K7 1162 aa11.76□□□□□ -0.53
PCNX1-203ENST00000553272 ARHGEF28Q8N1W1 1705 aaKnown RBP11.76□□□□□ -0.53
PCNX1-203ENST00000553272 GOLGB1Q14789 3259 aaKnown RBP11.76□□□□□ -0.53
PCNX1-203ENST00000553272 PLEKHG3A1L390 1219 aa11.75□□□□□ -0.53
PCNX1-203ENST00000553272 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
PCNX1-203ENST00000553272 PLSCR1O15162 318 aa11.75□□□□□ -0.53
PCNX1-203ENST00000553272 POTEDQ86YR6 584 aa11.75□□□□□ -0.53
PCNX1-203ENST00000553272 DCAF11Q8TEB1 546 aa11.75□□□□□ -0.53
PCNX1-203ENST00000553272 CDK19Q9BWU1 502 aa11.75□□□□□ -0.53
PCNX1-203ENST00000553272 USP19O94966 1318 aa11.75□□□□□ -0.53
PCNX1-203ENST00000553272 ACEP12821 1306 aa11.75□□□□□ -0.53
PCNX1-203ENST00000553272 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
PCNX1-203ENST00000553272 ABTB2Q8N961 1025 aa11.74□□□□□ -0.53
PCNX1-203ENST00000553272 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
PCNX1-203ENST00000553272 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
PCNX1-203ENST00000553272 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
PCNX1-203ENST00000553272 TUBGCP6Q96RT7 1819 aa11.74□□□□□ -0.53
PCNX1-203ENST00000553272 GCP02774 474 aa11.73□□□□□ -0.53
PCNX1-203ENST00000553272 PTGER2P43116 358 aa11.73□□□□□ -0.53
PCNX1-203ENST00000553272 PTF1AQ7RTS3 328 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms