RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 RPGRIP1LQ68CZ1 1315 aa7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 KNDC1Q76NI1 1749 aa7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 MARF1Q9Y4F3 1742 aaKnown RBP7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 PIK3C2GO75747 1445 aa7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 YTHDC2Q9H6S0 1430 aaKnown RBP7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 LMOD2Q6P5Q4 547 aa7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 MTERF4Q7Z6M4 381 aaKnown RBP7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 PMFBP1Q8TBY8 1022 aa7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 MAP7D2Q96T17 732 aa7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 HIRIP3Q9BW71 556 aaPredicted RBP7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 PRKRIP1Q9H875 184 aaPredicted RBP7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 LRPPRCP42704 1394 aaKnown RBP7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 EIF3AQ14152 1382 aaKnown RBP7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 COL22A1Q8NFW1 1626 aaPredicted RBP7.3□□□□□ -1.24
TMEM106C-221ENST00000553217 VIRMAQ69YN4 1812 aaKnown RBP7.29□□□□□ -1.24
TMEM106C-221ENST00000553217 ATRNO75882 1429 aa7.29□□□□□ -1.24
TMEM106C-221ENST00000553217 NBR1Q14596 966 aa7.29□□□□□ -1.24
TMEM106C-221ENST00000553217 NGEFQ8N5V2 710 aa7.29□□□□□ -1.24
TMEM106C-221ENST00000553217 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.29□□□□□ -1.24
TMEM106C-221ENST00000553217 KDM2AQ9Y2K7 1162 aa7.29□□□□□ -1.24
TMEM106C-221ENST00000553217 BCL9LQ86UU0 1499 aa7.29□□□□□ -1.24
TMEM106C-221ENST00000553217 CDK12Q9NYV4 1490 aaPredicted RBP7.29□□□□□ -1.24
TMEM106C-221ENST00000553217 GLI3P10071 1580 aa7.29□□□□□ -1.24
TMEM106C-221ENST00000553217 NPHP3Q7Z494 1330 aa7.28□□□□□ -1.24
TMEM106C-221ENST00000553217 PRAG1Q86YV5 1406 aa7.28□□□□□ -1.24
TMEM106C-221ENST00000553217 USP32Q8NFA0 1604 aa7.28□□□□□ -1.24
TMEM106C-221ENST00000553217 BECN1Q14457 450 aa7.28□□□□□ -1.24
TMEM106C-221ENST00000553217 PRAM1Q96QH2 718 aa7.28□□□□□ -1.24
TMEM106C-221ENST00000553217 MRS2Q9HD23 443 aa7.28□□□□□ -1.24
TMEM106C-221ENST00000553217 TRPC5Q9UL62 973 aaPredicted RBP7.28□□□□□ -1.24
TMEM106C-221ENST00000553217 BRWD3Q6RI45 1802 aa7.28□□□□□ -1.24
TMEM106C-221ENST00000553217 BRD4O60885 1362 aaPredicted RBP7.28□□□□□ -1.24
TMEM106C-221ENST00000553217 MINK1Q8N4C8 1332 aaPredicted RBP7.27□□□□□ -1.24
TMEM106C-221ENST00000553217 TECPR2O15040 1411 aa7.27□□□□□ -1.24
TMEM106C-221ENST00000553217 ABCA3Q99758 1704 aa7.27□□□□□ -1.25
TMEM106C-221ENST00000553217 RALBP1Q15311 655 aa7.27□□□□□ -1.25
TMEM106C-221ENST00000553217 KRT28Q7Z3Y7 464 aa7.27□□□□□ -1.25
TMEM106C-221ENST00000553217 TRAK1Q9UPV9 953 aa7.27□□□□□ -1.25
TMEM106C-221ENST00000553217 CENPJQ9HC77 1338 aaPredicted RBP7.27□□□□□ -1.25
TMEM106C-221ENST00000553217 PLCH1Q4KWH8 1693 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 RALGAPBQ86X10 1494 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 ABCC11Q96J66 1382 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 CCDC7Q96M83 1385 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 ANKRD30BQ9BXX2 1392 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 NINLQ9Y2I6 1382 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 HAP1P54257 671 aaPredicted RBP7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 DEFB132Q7Z7B7 95 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 FNBP4Q8N3X1 1017 aaPredicted RBP7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 CNKSR2Q8WXI2 1034 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 PKNOX2Q96KN3 472 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 BACH2Q9BYV9 841 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 PHF8Q9UPP1 1060 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 CCDC9Q9Y3X0 531 aaKnown RBP7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 SPATA31A3Q5VYP0 1347 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 PRR36Q9H6K5 1346 aa7.26□□□□□ -1.25
TMEM106C-221ENST00000553217 KIF1AQ12756 1690 aa7.25□□□□□ -1.25
TMEM106C-221ENST00000553217 ATAD2Q6PL18 1390 aa7.25□□□□□ -1.25
TMEM106C-221ENST00000553217 FAM182BQ5T319 152 aa7.25□□□□□ -1.25
TMEM106C-221ENST00000553217 C14orf93Q9H972 538 aaKnown RBP7.25□□□□□ -1.25
TMEM106C-221ENST00000553217 ANO8Q9HCE9 1232 aaPredicted RBP7.25□□□□□ -1.25
TMEM106C-221ENST00000553217 POGKQ9P215 609 aa7.25□□□□□ -1.25
TMEM106C-221ENST00000553217 TNS3Q68CZ2 1445 aa7.25□□□□□ -1.25
TMEM106C-221ENST00000553217 ADGRB1O14514 1584 aa7.25□□□□□ -1.25
TMEM106C-221ENST00000553217 NRXN1Q9ULB1 1477 aa7.24□□□□□ -1.25
TMEM106C-221ENST00000553217 SLIT2O94813 1529 aa7.24□□□□□ -1.25
TMEM106C-221ENST00000553217 A0A0G2JS52 829 aa7.24□□□□□ -1.25
TMEM106C-221ENST00000553217 SLC24A1O60721 1099 aa7.24□□□□□ -1.25
TMEM106C-221ENST00000553217 TERF1P54274 439 aa7.24□□□□□ -1.25
TMEM106C-221ENST00000553217 NUTM2GQ5VZR2 741 aa7.24□□□□□ -1.25
TMEM106C-221ENST00000553217 GJD4Q96KN9 370 aaPredicted RBP7.24□□□□□ -1.25
TMEM106C-221ENST00000553217 UNC5CLQ8IV45 518 aa7.23□□□□□ -1.25
TMEM106C-221ENST00000553217 DCAF11Q8TEB1 546 aa7.23□□□□□ -1.25
TMEM106C-221ENST00000553217 UPF2Q9HAU5 1272 aaKnown RBP7.23□□□□□ -1.25
TMEM106C-221ENST00000553217 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.23□□□□□ -1.25
TMEM106C-221ENST00000553217 TRPM3Q9HCF6 1732 aaPredicted RBP7.23□□□□□ -1.25
TMEM106C-221ENST00000553217 NRAPQ86VF7 1730 aa7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 ARHGEF28Q8N1W1 1705 aaKnown RBP7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 FAM83GA6ND36 823 aa7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 HSP90AA1P07900 732 aaKnown RBP7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 TPM2P07951 284 aa7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 PDE4AP27815 886 aa7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 PSME1Q06323 249 aa7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 B4GALNT3Q6L9W6 998 aa7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 CENPQQ7L2Z9 268 aaPredicted RBP7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 SEPT12Q8IYM1 358 aa7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 SALL2Q9Y467 1007 aaPredicted RBP7.22□□□□□ -1.25
TMEM106C-221ENST00000553217 PSDA5PKW4 1024 aaPredicted RBP7.21□□□□□ -1.26
TMEM106C-221ENST00000553217 PAK3O75914 559 aaPredicted RBP7.21□□□□□ -1.26
TMEM106C-221ENST00000553217 HSP90AA2PQ14568 343 aaPredicted RBP7.21□□□□□ -1.26
TMEM106C-221ENST00000553217 CHRNA2Q15822 529 aa7.21□□□□□ -1.26
TMEM106C-221ENST00000553217 FAM98CQ17RN3 349 aaKnown RBP7.21□□□□□ -1.26
TMEM106C-221ENST00000553217 ALS2Q96Q42 1657 aa7.21□□□□□ -1.26
TMEM106C-221ENST00000553217 ANP32BQ92688 251 aaKnown RBP7.2□□□□□ -1.26
TMEM106C-221ENST00000553217 PNNQ9H307 717 aaKnown RBP7.2□□□□□ -1.26
TMEM106C-221ENST00000553217 BTG4Q9NY30 223 aa7.2□□□□□ -1.26
TMEM106C-221ENST00000553217 CRYBG1Q9Y4K1 1723 aa7.2□□□□□ -1.26
TMEM106C-221ENST00000553217 DLC1Q96QB1 1528 aa7.2□□□□□ -1.26
TMEM106C-221ENST00000553217 TULP4Q9NRJ4 1543 aa7.2□□□□□ -1.26
TMEM106C-221ENST00000553217 MAPK8IP3Q9UPT6 1336 aa7.2□□□□□ -1.26
TMEM106C-221ENST00000553217 ADGRB2O60241 1585 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms