RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 PIP4K2BP78356 416 aa10.85□□□□□ -0.67
NPAS3-213ENST00000552874 PUS7Q96PZ0 661 aaKnown RBP10.85□□□□□ -0.67
NPAS3-213ENST00000552874 CABP2Q9NPB3 220 aa10.85□□□□□ -0.67
NPAS3-213ENST00000552874 LTN1O94822 1766 aa10.85□□□□□ -0.67
NPAS3-213ENST00000552874 SLIT3O75094 1523 aa10.84□□□□□ -0.67
NPAS3-213ENST00000552874 NRAPQ86VF7 1730 aa10.84□□□□□ -0.67
NPAS3-213ENST00000552874 PLEKHG3A1L390 1219 aa10.84□□□□□ -0.67
NPAS3-213ENST00000552874 HSPA1LP34931 641 aa10.84□□□□□ -0.67
NPAS3-213ENST00000552874 EIF4G2P78344 907 aaKnown RBP eCLIP10.84□□□□□ -0.67
NPAS3-213ENST00000552874 ILDR1Q86SU0 546 aaPredicted RBP10.84□□□□□ -0.67
NPAS3-213ENST00000552874 DDX17Q92841 729 aaKnown RBP10.84□□□□□ -0.67
NPAS3-213ENST00000552874 PNPLA6Q8IY17 1366 aa10.84□□□□□ -0.67
NPAS3-213ENST00000552874 NINLQ9Y2I6 1382 aa10.84□□□□□ -0.67
NPAS3-213ENST00000552874 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.84□□□□□ -0.67
NPAS3-213ENST00000552874 COL18A1P39060 1754 aa10.83□□□□□ -0.68
NPAS3-213ENST00000552874 LMO7Q8WWI1 1683 aa10.83□□□□□ -0.68
NPAS3-213ENST00000552874 A0A1W2PP64 1363 aa10.83□□□□□ -0.68
NPAS3-213ENST00000552874 SBNO1A3KN83 1393 aa10.83□□□□□ -0.68
NPAS3-213ENST00000552874 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.68
NPAS3-213ENST00000552874 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
NPAS3-213ENST00000552874 NWD2Q9ULI1 1742 aa10.82□□□□□ -0.68
NPAS3-213ENST00000552874 ABCB7O75027 752 aa10.82□□□□□ -0.68
NPAS3-213ENST00000552874 ESCO1Q5FWF5 840 aa10.82□□□□□ -0.68
NPAS3-213ENST00000552874 CCDC61Q9Y6R9 512 aa10.82□□□□□ -0.68
NPAS3-213ENST00000552874 NFAT5O94916 1531 aa10.82□□□□□ -0.68
NPAS3-213ENST00000552874 RGPD5Q99666 1765 aa10.82□□□□□ -0.68
NPAS3-213ENST00000552874 NPHP3Q7Z494 1330 aa10.82□□□□□ -0.68
NPAS3-213ENST00000552874 ANKRD36BQ8N2N9 1353 aa10.81□□□□□ -0.68
NPAS3-213ENST00000552874 ACEP12821 1306 aa10.81□□□□□ -0.68
NPAS3-213ENST00000552874 BRD4O60885 1362 aaPredicted RBP10.8□□□□□ -0.68
NPAS3-213ENST00000552874 CCDC7Q96M83 1385 aa10.8□□□□□ -0.68
NPAS3-213ENST00000552874 WNK3Q9BYP7 1800 aa10.8□□□□□ -0.68
NPAS3-213ENST00000552874 SRPK2P78362 688 aaKnown RBP10.8□□□□□ -0.68
NPAS3-213ENST00000552874 FOXD4L1Q9NU39 408 aa10.8□□□□□ -0.68
NPAS3-213ENST00000552874 OVOS2A0A0J9YW53 1432 aa10.8□□□□□ -0.68
NPAS3-213ENST00000552874 OVOS2Q6IE36 1432 aa10.8□□□□□ -0.68
NPAS3-213ENST00000552874 EDC4Q6P2E9 1401 aaKnown RBP10.8□□□□□ -0.68
NPAS3-213ENST00000552874 KIF7Q2M1P5 1343 aa10.8□□□□□ -0.68
NPAS3-213ENST00000552874 JCADQ9P266 1359 aa10.79□□□□□ -0.68
NPAS3-213ENST00000552874 FOXO3O43524 673 aa10.79□□□□□ -0.68
NPAS3-213ENST00000552874 TMF1P82094 1093 aa10.79□□□□□ -0.68
NPAS3-213ENST00000552874 PMFBP1Q8TBY8 1022 aa10.79□□□□□ -0.68
NPAS3-213ENST00000552874 SPATA31A3Q5VYP0 1347 aa10.79□□□□□ -0.68
NPAS3-213ENST00000552874 WASHC2AQ641Q2 1341 aa10.79□□□□□ -0.68
NPAS3-213ENST00000552874 COL14A1Q05707 1796 aaKnown RBP10.78□□□□□ -0.68
NPAS3-213ENST00000552874 ZEB1P37275 1124 aaPredicted RBP10.78□□□□□ -0.68
NPAS3-213ENST00000552874 CABP1Q9NZU7 370 aa10.78□□□□□ -0.68
NPAS3-213ENST00000552874 MAP2P11137 1827 aaKnown RBP10.78□□□□□ -0.68
NPAS3-213ENST00000552874 PEAK1Q9H792 1746 aa10.78□□□□□ -0.68
NPAS3-213ENST00000552874 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
NPAS3-213ENST00000552874 XPCQ01831 940 aaPredicted RBP10.77□□□□□ -0.69
NPAS3-213ENST00000552874 ABCC6O95255 1503 aa10.77□□□□□ -0.69
NPAS3-213ENST00000552874 USP19O94966 1318 aa10.77□□□□□ -0.69
NPAS3-213ENST00000552874 SLC12A5Q9H2X9 1139 aa10.76□□□□□ -0.69
NPAS3-213ENST00000552874 ARHGEF10O15013 1369 aa10.76□□□□□ -0.69
NPAS3-213ENST00000552874 KTN1Q86UP2 1357 aaKnown RBP10.76□□□□□ -0.69
NPAS3-213ENST00000552874 KRT28Q7Z3Y7 464 aa10.75□□□□□ -0.69
NPAS3-213ENST00000552874 CAMTA1Q9Y6Y1 1673 aa10.75□□□□□ -0.69
NPAS3-213ENST00000552874 USP31Q70CQ4 1352 aa10.75□□□□□ -0.69
NPAS3-213ENST00000552874 RGPD2P0DJD1 1756 aa10.75□□□□□ -0.69
NPAS3-213ENST00000552874 NSD3Q9BZ95 1437 aa10.75□□□□□ -0.69
NPAS3-213ENST00000552874 FAM208AQ9UK61 1670 aaKnown RBP10.74□□□□□ -0.69
NPAS3-213ENST00000552874 TTC21BQ7Z4L5 1316 aa10.74□□□□□ -0.69
NPAS3-213ENST00000552874 CDCA8Q53HL2 280 aa10.73□□□□□ -0.69
NPAS3-213ENST00000552874 NGDNQ8NEJ9 315 aaKnown RBP10.73□□□□□ -0.69
NPAS3-213ENST00000552874 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
NPAS3-213ENST00000552874 LRRC59Q96AG4 307 aaKnown RBP10.72□□□□□ -0.69
NPAS3-213ENST00000552874 SPATA31A6Q5VVP1 1343 aa10.72□□□□□ -0.69
NPAS3-213ENST00000552874 TTC21AQ8NDW8 1320 aa10.72□□□□□ -0.69
NPAS3-213ENST00000552874 SLIT2O94813 1529 aa10.72□□□□□ -0.69
NPAS3-213ENST00000552874 EP400Q96L91 3159 aa10.72□□□□□ -0.69
NPAS3-213ENST00000552874 PSME1Q06323 249 aa10.7□□□□□ -0.7
NPAS3-213ENST00000552874 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
NPAS3-213ENST00000552874 GLI3P10071 1580 aa10.69□□□□□ -0.7
NPAS3-213ENST00000552874 SMG6Q86US8 1419 aaKnown RBP10.69□□□□□ -0.7
NPAS3-213ENST00000552874 CPDO75976 1380 aa10.69□□□□□ -0.7
NPAS3-213ENST00000552874 TMC1Q8TDI8 760 aa10.69□□□□□ -0.7
NPAS3-213ENST00000552874 RGPD1P0DJD0 1748 aa10.69□□□□□ -0.7
NPAS3-213ENST00000552874 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
NPAS3-213ENST00000552874 SHANK3Q9BYB0 1731 aa10.68□□□□□ -0.7
NPAS3-213ENST00000552874 ZBTB22O15209 634 aa10.68□□□□□ -0.7
NPAS3-213ENST00000552874 HDGFL2Q7Z4V5 671 aaPredicted RBP10.68□□□□□ -0.7
NPAS3-213ENST00000552874 NME9Q86XW9 330 aa10.68□□□□□ -0.7
NPAS3-213ENST00000552874 TERF2IPQ9NYB0 399 aa10.68□□□□□ -0.7
NPAS3-213ENST00000552874 ZRANB1Q9UGI0 708 aa10.68□□□□□ -0.7
NPAS3-213ENST00000552874 THSD7AQ9UPZ6 1657 aa10.68□□□□□ -0.7
NPAS3-213ENST00000552874 NSD2O96028 1365 aa10.67□□□□□ -0.7
NPAS3-213ENST00000552874 NPC1L1Q9UHC9 1359 aa10.67□□□□□ -0.7
NPAS3-213ENST00000552874 PER1O15534 1290 aaPredicted RBP10.67□□□□□ -0.7
NPAS3-213ENST00000552874 BCL9LQ86UU0 1499 aa10.67□□□□□ -0.7
NPAS3-213ENST00000552874 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
NPAS3-213ENST00000552874 PARP4Q9UKK3 1724 aaKnown RBP10.65□□□□□ -0.7
NPAS3-213ENST00000552874 FYB1O15117 783 aa10.65□□□□□ -0.7
NPAS3-213ENST00000552874 AMER1Q5JTC6 1135 aaPredicted RBP10.65□□□□□ -0.7
NPAS3-213ENST00000552874 PANK3Q9H999 370 aa10.65□□□□□ -0.7
NPAS3-213ENST00000552874 ATF5Q9Y2D1 282 aaPredicted RBP10.65□□□□□ -0.7
NPAS3-213ENST00000552874 COL5A2P05997 1499 aaPredicted RBP10.65□□□□□ -0.7
NPAS3-213ENST00000552874 KIAA0232Q92628 1395 aa10.65□□□□□ -0.71
NPAS3-213ENST00000552874 VIRMAQ69YN4 1812 aaKnown RBP10.64□□□□□ -0.71
NPAS3-213ENST00000552874 PAK3O75914 559 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms