RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 HDGFL2Q7Z4V5 671 aaPredicted RBP13.75□□□□□ -0.21
MMP19-209ENST00000552872 NME9Q86XW9 330 aa13.75□□□□□ -0.21
MMP19-209ENST00000552872 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
MMP19-209ENST00000552872 PHF8Q9UPP1 1060 aa13.75□□□□□ -0.21
MMP19-209ENST00000552872 FANCIQ9NVI1 1328 aa13.75□□□□□ -0.21
MMP19-209ENST00000552872 ITSN1Q15811 1721 aa13.75□□□□□ -0.21
MMP19-209ENST00000552872 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
MMP19-209ENST00000552872 PIP4K2BP78356 416 aa13.74□□□□□ -0.21
MMP19-209ENST00000552872 LMOD2Q6P5Q4 547 aa13.74□□□□□ -0.21
MMP19-209ENST00000552872 MST1RQ04912 1400 aa13.74□□□□□ -0.21
MMP19-209ENST00000552872 C1orf167Q5SNV9 1468 aa13.74□□□□□ -0.21
MMP19-209ENST00000552872 PRKRIP1Q9H875 184 aaPredicted RBP13.74□□□□□ -0.21
MMP19-209ENST00000552872 SLAIN2Q9P270 581 aa13.73□□□□□ -0.21
MMP19-209ENST00000552872 CADPS2Q86UW7 1296 aa13.73□□□□□ -0.21
MMP19-209ENST00000552872 DEKP35659 375 aaKnown RBP13.72□□□□□ -0.21
MMP19-209ENST00000552872 PSME1Q06323 249 aa13.72□□□□□ -0.21
MMP19-209ENST00000552872 AKAP12Q02952 1782 aa13.72□□□□□ -0.21
MMP19-209ENST00000552872 PLEKHG3A1L390 1219 aa13.71□□□□□ -0.21
MMP19-209ENST00000552872 FYB1O15117 783 aa13.71□□□□□ -0.21
MMP19-209ENST00000552872 PUS7Q96PZ0 661 aaKnown RBP13.71□□□□□ -0.21
MMP19-209ENST00000552872 CPSF1Q10570 1443 aaKnown RBP13.71□□□□□ -0.21
MMP19-209ENST00000552872 BRINP3Q76B58 766 aa13.71□□□□□ -0.22
MMP19-209ENST00000552872 ANKARQ7Z5J8 1434 aa13.69□□□□□ -0.22
MMP19-209ENST00000552872 MON2Q7Z3U7 1717 aa13.69□□□□□ -0.22
MMP19-209ENST00000552872 USP6P35125 1406 aa13.69□□□□□ -0.22
MMP19-209ENST00000552872 CGNL1Q0VF96 1302 aa13.69□□□□□ -0.22
MMP19-209ENST00000552872 TTC21BQ7Z4L5 1316 aa13.68□□□□□ -0.22
MMP19-209ENST00000552872 MORC1Q86VD1 984 aa13.68□□□□□ -0.22
MMP19-209ENST00000552872 NINLQ9Y2I6 1382 aa13.67□□□□□ -0.22
MMP19-209ENST00000552872 PPM1GO15355 546 aaPredicted RBP13.67□□□□□ -0.22
MMP19-209ENST00000552872 UBAP1LF5GYI3 381 aa13.67□□□□□ -0.22
MMP19-209ENST00000552872 KRT28Q7Z3Y7 464 aa13.67□□□□□ -0.22
MMP19-209ENST00000552872 ABTB2Q8N961 1025 aa13.67□□□□□ -0.22
MMP19-209ENST00000552872 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
MMP19-209ENST00000552872 POLR3AO14802 1390 aaPredicted RBP13.66□□□□□ -0.22
MMP19-209ENST00000552872 PKNOX2Q96KN3 472 aa13.66□□□□□ -0.22
MMP19-209ENST00000552872 ZBTB7CA1YPR0 619 aa13.66□□□□□ -0.22
MMP19-209ENST00000552872 CABLES1Q8TDN4 633 aa13.66□□□□□ -0.22
MMP19-209ENST00000552872 EDC4Q6P2E9 1401 aaKnown RBP13.66□□□□□ -0.22
MMP19-209ENST00000552872 NRKQ7Z2Y5 1582 aa13.65□□□□□ -0.22
MMP19-209ENST00000552872 RRS1Q15050 365 aaKnown RBP13.65□□□□□ -0.22
MMP19-209ENST00000552872 ZNF692Q9BU19 519 aaPredicted RBP13.65□□□□□ -0.22
MMP19-209ENST00000552872 DCCP43146 1447 aa13.65□□□□□ -0.22
MMP19-209ENST00000552872 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
MMP19-209ENST00000552872 NLRP6P59044 892 aa13.65□□□□□ -0.22
MMP19-209ENST00000552872 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
MMP19-209ENST00000552872 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
MMP19-209ENST00000552872 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
MMP19-209ENST00000552872 PIK3C2AO00443 1686 aa13.64□□□□□ -0.23
MMP19-209ENST00000552872 ROBO1Q9Y6N7 1651 aa13.64□□□□□ -0.23
MMP19-209ENST00000552872 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
MMP19-209ENST00000552872 CERKQ8TCT0 537 aa13.63□□□□□ -0.23
MMP19-209ENST00000552872 PODXL2Q9NZ53 605 aa13.63□□□□□ -0.23
MMP19-209ENST00000552872 FAM9BQ8IZU0 186 aa13.63□□□□□ -0.23
MMP19-209ENST00000552872 SSH2Q76I76 1423 aa13.62□□□□□ -0.23
MMP19-209ENST00000552872 COG3Q96JB2 828 aa13.61□□□□□ -0.23
MMP19-209ENST00000552872 EMILIN1Q9Y6C2 1016 aa13.61□□□□□ -0.23
MMP19-209ENST00000552872 CCER2I3L3R5 266 aa13.61□□□□□ -0.23
MMP19-209ENST00000552872 MAP2P11137 1827 aaKnown RBP13.61□□□□□ -0.23
MMP19-209ENST00000552872 MYBBP1AQ9BQG0 1328 aaKnown RBP13.61□□□□□ -0.23
MMP19-209ENST00000552872 MTHFSP49914 203 aa13.6□□□□□ -0.23
MMP19-209ENST00000552872 RALBP1Q15311 655 aa13.6□□□□□ -0.23
MMP19-209ENST00000552872 NPHP3Q7Z494 1330 aa13.6□□□□□ -0.23
MMP19-209ENST00000552872 KIF1AQ12756 1690 aa13.6□□□□□ -0.23
MMP19-209ENST00000552872 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
MMP19-209ENST00000552872 MARF1Q9Y4F3 1742 aaKnown RBP13.59□□□□□ -0.23
MMP19-209ENST00000552872 PXDNQ92626 1479 aa13.58□□□□□ -0.24
MMP19-209ENST00000552872 ANKRD26Q9UPS8 1709 aa13.58□□□□□ -0.24
MMP19-209ENST00000552872 TOM1O60784 492 aa13.58□□□□□ -0.24
MMP19-209ENST00000552872 ZC3H6P61129 1189 aaKnown RBP13.57□□□□□ -0.24
MMP19-209ENST00000552872 NLRP13Q86W25 1043 aa13.56□□□□□ -0.24
MMP19-209ENST00000552872 POLKQ9UBT6 870 aa13.56□□□□□ -0.24
MMP19-209ENST00000552872 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
MMP19-209ENST00000552872 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
MMP19-209ENST00000552872 TTC21AQ8NDW8 1320 aa13.56□□□□□ -0.24
MMP19-209ENST00000552872 NPC1L1Q9UHC9 1359 aa13.56□□□□□ -0.24
MMP19-209ENST00000552872 LTV1Q96GA3 475 aaPredicted RBP13.54□□□□□ -0.24
MMP19-209ENST00000552872 SPATA31A3Q5VYP0 1347 aa13.54□□□□□ -0.24
MMP19-209ENST00000552872 CHRNA2Q15822 529 aa13.54□□□□□ -0.24
MMP19-209ENST00000552872 ALS2Q96Q42 1657 aa13.54□□□□□ -0.24
MMP19-209ENST00000552872 NSD2O96028 1365 aa13.54□□□□□ -0.24
MMP19-209ENST00000552872 SOS2Q07890 1332 aaPredicted RBP13.53□□□□□ -0.24
MMP19-209ENST00000552872 HSP90AB2PQ58FF8 381 aa13.53□□□□□ -0.24
MMP19-209ENST00000552872 NHSL1Q5SYE7 1610 aa13.53□□□□□ -0.24
MMP19-209ENST00000552872 TNS3Q68CZ2 1445 aa13.53□□□□□ -0.24
MMP19-209ENST00000552872 PHLPP1O60346 1717 aa13.53□□□□□ -0.24
MMP19-209ENST00000552872 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
MMP19-209ENST00000552872 GCP02774 474 aa13.53□□□□□ -0.24
MMP19-209ENST00000552872 MED1Q15648 1581 aaPredicted RBP13.52□□□□□ -0.24
MMP19-209ENST00000552872 PEAK1Q9H792 1746 aa13.52□□□□□ -0.24
MMP19-209ENST00000552872 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.25
MMP19-209ENST00000552872 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.25
MMP19-209ENST00000552872 HAP1P54257 671 aaPredicted RBP13.52□□□□□ -0.25
MMP19-209ENST00000552872 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.25
MMP19-209ENST00000552872 CCDC146Q8IYE0 955 aa13.52□□□□□ -0.25
MMP19-209ENST00000552872 LTN1O94822 1766 aa13.51□□□□□ -0.25
MMP19-209ENST00000552872 U2SURPO15042 1029 aaKnown RBP13.51□□□□□ -0.25
MMP19-209ENST00000552872 AMPHP49418 695 aa13.51□□□□□ -0.25
MMP19-209ENST00000552872 PNISRQ8TF01 805 aaKnown RBP13.5□□□□□ -0.25
MMP19-209ENST00000552872 ADAMTS8Q9UP79 889 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms