RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 MYOM1P52179 1685 aa18.36■□□□□ 0.53
CDK4-212ENST00000552388 PSME1Q06323 249 aa18.36■□□□□ 0.53
CDK4-212ENST00000552388 SRCAPQ6ZRS2 3230 aa18.36■□□□□ 0.53
CDK4-212ENST00000552388 KRT28Q7Z3Y7 464 aa18.36■□□□□ 0.53
CDK4-212ENST00000552388 EP400Q96L91 3159 aa18.36■□□□□ 0.53
CDK4-212ENST00000552388 CABP1Q9NZU7 370 aa18.36■□□□□ 0.53
CDK4-212ENST00000552388 MARF1Q9Y4F3 1742 aaKnown RBP18.36■□□□□ 0.53
CDK4-212ENST00000552388 SBNO1A3KN83 1393 aa18.35■□□□□ 0.53
CDK4-212ENST00000552388 XPCQ01831 940 aaPredicted RBP18.35■□□□□ 0.53
CDK4-212ENST00000552388 CDCA8Q53HL2 280 aa18.34■□□□□ 0.53
CDK4-212ENST00000552388 FNBP4Q8N3X1 1017 aaPredicted RBP18.34■□□□□ 0.53
CDK4-212ENST00000552388 C8orf37Q96NL8 207 aa18.34■□□□□ 0.53
CDK4-212ENST00000552388 QTRT2Q9H974 415 aaKnown RBP18.34■□□□□ 0.53
CDK4-212ENST00000552388 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.34■□□□□ 0.53
CDK4-212ENST00000552388 NRKQ7Z2Y5 1582 aa18.34■□□□□ 0.53
CDK4-212ENST00000552388 NINLQ9Y2I6 1382 aa18.33■□□□□ 0.53
CDK4-212ENST00000552388 CPSF1Q10570 1443 aaKnown RBP18.32■□□□□ 0.52
CDK4-212ENST00000552388 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
CDK4-212ENST00000552388 SPATA31A3Q5VYP0 1347 aa18.32■□□□□ 0.52
CDK4-212ENST00000552388 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
CDK4-212ENST00000552388 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
CDK4-212ENST00000552388 ABCA3Q99758 1704 aa18.31■□□□□ 0.52
CDK4-212ENST00000552388 USP6P35125 1406 aa18.31■□□□□ 0.52
CDK4-212ENST00000552388 CRYBG1Q9Y4K1 1723 aa18.3■□□□□ 0.52
CDK4-212ENST00000552388 BCL9LQ86UU0 1499 aa18.3■□□□□ 0.52
CDK4-212ENST00000552388 TMC1Q8TDI8 760 aa18.29■□□□□ 0.52
CDK4-212ENST00000552388 ZNF692Q9BU19 519 aaPredicted RBP18.29■□□□□ 0.52
CDK4-212ENST00000552388 SLC12A5Q9H2X9 1139 aa18.29■□□□□ 0.52
CDK4-212ENST00000552388 SSH2Q76I76 1423 aa18.29■□□□□ 0.52
CDK4-212ENST00000552388 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
CDK4-212ENST00000552388 NGLY1Q96IV0 654 aa18.27■□□□□ 0.52
CDK4-212ENST00000552388 PIK3C2AO00443 1686 aa18.26■□□□□ 0.51
CDK4-212ENST00000552388 C11orf95C9JLR9 678 aaPredicted RBP18.26■□□□□ 0.51
CDK4-212ENST00000552388 TRPC5Q9UL62 973 aaPredicted RBP18.26■□□□□ 0.51
CDK4-212ENST00000552388 A0A1W2PP64 1363 aa18.26■□□□□ 0.51
CDK4-212ENST00000552388 KTN1Q86UP2 1357 aaKnown RBP18.26■□□□□ 0.51
CDK4-212ENST00000552388 ADAMTS2O95450 1211 aa18.25■□□□□ 0.51
CDK4-212ENST00000552388 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
CDK4-212ENST00000552388 USP21Q9UK80 565 aa18.25■□□□□ 0.51
CDK4-212ENST00000552388 USP54Q70EL1 1684 aa18.25■□□□□ 0.51
CDK4-212ENST00000552388 SLIT2O94813 1529 aa18.24■□□□□ 0.51
CDK4-212ENST00000552388 PHRF1Q9P1Y6 1649 aaKnown RBP18.24■□□□□ 0.51
CDK4-212ENST00000552388 PAK3O75914 559 aaPredicted RBP18.24■□□□□ 0.51
CDK4-212ENST00000552388 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
CDK4-212ENST00000552388 ANKRD36BQ8N2N9 1353 aa18.24■□□□□ 0.51
CDK4-212ENST00000552388 GLI3P10071 1580 aa18.23■□□□□ 0.51
CDK4-212ENST00000552388 LMOD2Q6P5Q4 547 aa18.22■□□□□ 0.51
CDK4-212ENST00000552388 EDC4Q6P2E9 1401 aaKnown RBP18.22■□□□□ 0.51
CDK4-212ENST00000552388 TTC21BQ7Z4L5 1316 aa18.22■□□□□ 0.51
CDK4-212ENST00000552388 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
CDK4-212ENST00000552388 KIF20BQ96Q89 1820 aa18.21■□□□□ 0.51
CDK4-212ENST00000552388 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
CDK4-212ENST00000552388 ABTB2Q8N961 1025 aa18.19■□□□□ 0.5
CDK4-212ENST00000552388 POLR3GLQ9BT43 218 aa18.19■□□□□ 0.5
CDK4-212ENST00000552388 CCDC7Q96M83 1385 aa18.17■□□□□ 0.5
CDK4-212ENST00000552388 SLIT3O75094 1523 aa18.17■□□□□ 0.5
CDK4-212ENST00000552388 NWD2Q9ULI1 1742 aa18.16■□□□□ 0.5
CDK4-212ENST00000552388 NLRP13Q86W25 1043 aa18.16■□□□□ 0.5
CDK4-212ENST00000552388 CABLES1Q8TDN4 633 aa18.16■□□□□ 0.5
CDK4-212ENST00000552388 WASHC2AQ641Q2 1341 aa18.16■□□□□ 0.5
CDK4-212ENST00000552388 NUTM2GQ5VZR2 741 aa18.15■□□□□ 0.5
CDK4-212ENST00000552388 USP19O94966 1318 aa18.15■□□□□ 0.5
CDK4-212ENST00000552388 USP31Q70CQ4 1352 aa18.15■□□□□ 0.5
CDK4-212ENST00000552388 NLRP6P59044 892 aa18.14■□□□□ 0.49
CDK4-212ENST00000552388 CCDC125Q86Z20 511 aa18.14■□□□□ 0.49
CDK4-212ENST00000552388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.14■□□□□ 0.49
CDK4-212ENST00000552388 GJD4Q96KN9 370 aaPredicted RBP18.14■□□□□ 0.49
CDK4-212ENST00000552388 PLCH1Q4KWH8 1693 aa18.14■□□□□ 0.49
CDK4-212ENST00000552388 ANKRD26Q9UPS8 1709 aa18.14■□□□□ 0.49
CDK4-212ENST00000552388 CARD14Q9BXL6 1004 aa18.13■□□□□ 0.49
CDK4-212ENST00000552388 BRWD3Q6RI45 1802 aa18.13■□□□□ 0.49
CDK4-212ENST00000552388 NSD3Q9BZ95 1437 aa18.13■□□□□ 0.49
CDK4-212ENST00000552388 COL14A1Q05707 1796 aaKnown RBP18.12■□□□□ 0.49
CDK4-212ENST00000552388 HAP1P54257 671 aaPredicted RBP18.12■□□□□ 0.49
CDK4-212ENST00000552388 NME9Q86XW9 330 aa18.12■□□□□ 0.49
CDK4-212ENST00000552388 OVOS2A0A0J9YW53 1432 aa18.12■□□□□ 0.49
CDK4-212ENST00000552388 OVOS2Q6IE36 1432 aa18.12■□□□□ 0.49
CDK4-212ENST00000552388 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
CDK4-212ENST00000552388 PANK3Q9H999 370 aa18.11■□□□□ 0.49
CDK4-212ENST00000552388 BLMP54132 1417 aaPredicted RBP18.11■□□□□ 0.49
CDK4-212ENST00000552388 LTN1O94822 1766 aa18.1■□□□□ 0.49
CDK4-212ENST00000552388 NRAPQ86VF7 1730 aa18.1■□□□□ 0.49
CDK4-212ENST00000552388 UNC5CLQ8IV45 518 aa18.1■□□□□ 0.49
CDK4-212ENST00000552388 NFAT5O94916 1531 aa18.09■□□□□ 0.49
CDK4-212ENST00000552388 FYB1O15117 783 aa18.08■□□□□ 0.48
CDK4-212ENST00000552388 GCP02774 474 aa18.08■□□□□ 0.48
CDK4-212ENST00000552388 ZRANB1Q9UGI0 708 aa18.08■□□□□ 0.48
CDK4-212ENST00000552388 LRP5O75197 1615 aa18.08■□□□□ 0.48
CDK4-212ENST00000552388 COL18A1P39060 1754 aa18.07■□□□□ 0.48
CDK4-212ENST00000552388 CPDO75976 1380 aa18.07■□□□□ 0.48
CDK4-212ENST00000552388 LMO7Q8WWI1 1683 aa18.07■□□□□ 0.48
CDK4-212ENST00000552388 ONECUT3O60422 494 aaPredicted RBP18.06■□□□□ 0.48
CDK4-212ENST00000552388 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
CDK4-212ENST00000552388 RGPD5Q99666 1765 aa18.06■□□□□ 0.48
CDK4-212ENST00000552388 KIAA0232Q92628 1395 aa18.05■□□□□ 0.48
CDK4-212ENST00000552388 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
CDK4-212ENST00000552388 COG3Q96JB2 828 aa18.05■□□□□ 0.48
CDK4-212ENST00000552388 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
CDK4-212ENST00000552388 VPS72Q15906 364 aa18.04■□□□□ 0.48
CDK4-212ENST00000552388 MAP2P11137 1827 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms