RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 MPNDQ8N594 471 aa9.08□□□□□ -0.96
HCFC2-206ENST00000552343 ZNF511Q8NB15 262 aa9.08□□□□□ -0.96
HCFC2-206ENST00000552343 WDR4P57081 412 aaKnown RBP9.07□□□□□ -0.96
HCFC2-206ENST00000552343 SCARF1Q14162 830 aa9.07□□□□□ -0.96
HCFC2-206ENST00000552343 TPRNQ4KMQ1 711 aa9.07□□□□□ -0.96
HCFC2-206ENST00000552343 VSIG8P0DPA2 414 aa9.06□□□□□ -0.96
HCFC2-206ENST00000552343 KRI1Q8N9T8 703 aaKnown RBP9.06□□□□□ -0.96
HCFC2-206ENST00000552343 ADH1CP00326 375 aa9.05□□□□□ -0.96
HCFC2-206ENST00000552343 NDUFV2P19404 249 aa9.05□□□□□ -0.96
HCFC2-206ENST00000552343 PRR7Q8TB68 274 aa9.05□□□□□ -0.96
HCFC2-206ENST00000552343 SPIRE2Q8WWL2 714 aa9.05□□□□□ -0.96
HCFC2-206ENST00000552343 KLF16Q9BXK1 252 aaPredicted RBP9.05□□□□□ -0.96
HCFC2-206ENST00000552343 MOXD2PA6NHM9 499 aa9.03□□□□□ -0.96
HCFC2-206ENST00000552343 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.97
HCFC2-206ENST00000552343 DESI1Q6ICB0 168 aa9.01□□□□□ -0.97
HCFC2-206ENST00000552343 MTMR2Q13614 643 aa9□□□□□ -0.97
HCFC2-206ENST00000552343 FAM174AQ8TBP5 190 aa9□□□□□ -0.97
HCFC2-206ENST00000552343 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
HCFC2-206ENST00000552343 MAN1A2O60476 641 aa8.99□□□□□ -0.97
HCFC2-206ENST00000552343 ZIC2O95409 532 aaPredicted RBP8.99□□□□□ -0.97
HCFC2-206ENST00000552343 KCNMA1Q12791 1236 aa8.99□□□□□ -0.97
HCFC2-206ENST00000552343 C6orf118Q5T5N4 469 aa8.99□□□□□ -0.97
HCFC2-206ENST00000552343 SPDYE5A6NIY4 337 aa8.98□□□□□ -0.97
HCFC2-206ENST00000552343 ARID5BQ14865 1188 aa8.98□□□□□ -0.97
HCFC2-206ENST00000552343 FOXJ1Q92949 421 aa8.98□□□□□ -0.97
HCFC2-206ENST00000552343 CDK15Q96Q40 435 aa8.98□□□□□ -0.97
HCFC2-206ENST00000552343 PPFIA3O75145 1194 aa8.97□□□□□ -0.97
HCFC2-206ENST00000552343 PRKCSHP14314 528 aaPredicted RBP8.97□□□□□ -0.97
HCFC2-206ENST00000552343 CTHP32929 405 aa8.97□□□□□ -0.97
HCFC2-206ENST00000552343 GSK3AP49840 483 aa8.97□□□□□ -0.97
HCFC2-206ENST00000552343 KCTD17Q8N5Z5 321 aa8.97□□□□□ -0.97
HCFC2-206ENST00000552343 ITPKCQ96DU7 683 aa8.97□□□□□ -0.97
HCFC2-206ENST00000552343 NR3C2P08235 984 aa8.96□□□□□ -0.98
HCFC2-206ENST00000552343 LYPD8Q6UX82 237 aa8.96□□□□□ -0.98
HCFC2-206ENST00000552343 BMP2P12643 396 aa8.93□□□□□ -0.98
HCFC2-206ENST00000552343 GRM5P41594 1212 aa8.93□□□□□ -0.98
HCFC2-206ENST00000552343 NR5A1Q13285 461 aa8.93□□□□□ -0.98
HCFC2-206ENST00000552343 MAP10Q9P2G4 905 aa8.93□□□□□ -0.98
HCFC2-206ENST00000552343 F12P00748 615 aaPredicted RBP8.92□□□□□ -0.98
HCFC2-206ENST00000552343 C4orf48Q5BLP8 95 aa8.92□□□□□ -0.98
HCFC2-206ENST00000552343 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
HCFC2-206ENST00000552343 SOS2Q07890 1332 aaPredicted RBP8.91□□□□□ -0.98
HCFC2-206ENST00000552343 CFAP99D6REC4 459 aa8.91□□□□□ -0.98
HCFC2-206ENST00000552343 TTLL12Q14166 644 aaPredicted RBP8.91□□□□□ -0.98
HCFC2-206ENST00000552343 MEIOBQ8N635 442 aa8.91□□□□□ -0.98
HCFC2-206ENST00000552343 DNMT3LQ9UJW3 386 aa8.91□□□□□ -0.98
HCFC2-206ENST00000552343 PCDHB15Q9Y5E8 787 aa8.91□□□□□ -0.98
HCFC2-206ENST00000552343 UPP2O95045 317 aa8.9□□□□□ -0.98
HCFC2-206ENST00000552343 GJA5P36382 358 aa8.9□□□□□ -0.98
HCFC2-206ENST00000552343 KRT76Q01546 638 aa8.9□□□□□ -0.98
HCFC2-206ENST00000552343 AGERQ15109 404 aa8.9□□□□□ -0.98
HCFC2-206ENST00000552343 RSBN1LQ6PCB5 846 aaPredicted RBP8.9□□□□□ -0.98
HCFC2-206ENST00000552343 TMEM151AQ8N4L1 468 aa8.9□□□□□ -0.98
HCFC2-206ENST00000552343 GIGYF2Q6Y7W6 1299 aaKnown RBP8.89□□□□□ -0.99
HCFC2-206ENST00000552343 GPR161Q8N6U8 529 aaKnown RBP8.89□□□□□ -0.99
HCFC2-206ENST00000552343 BEGAINQ9BUH8 593 aa8.89□□□□□ -0.99
HCFC2-206ENST00000552343 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
HCFC2-206ENST00000552343 SPTLC1O15269 473 aa8.88□□□□□ -0.99
HCFC2-206ENST00000552343 RASSF7Q02833 373 aa8.88□□□□□ -0.99
HCFC2-206ENST00000552343 BPHLQ86WA6 291 aaPredicted RBP8.88□□□□□ -0.99
HCFC2-206ENST00000552343 CNTNAP3BQ96NU0 1288 aa8.88□□□□□ -0.99
HCFC2-206ENST00000552343 CNTNAP3Q9BZ76 1288 aa8.88□□□□□ -0.99
HCFC2-206ENST00000552343 GDF11O95390 407 aa8.87□□□□□ -0.99
HCFC2-206ENST00000552343 HRCP23327 699 aa8.87□□□□□ -0.99
HCFC2-206ENST00000552343 AMHR2Q16671 573 aa8.86□□□□□ -0.99
HCFC2-206ENST00000552343 ADAMTS8Q9UP79 889 aa8.86□□□□□ -0.99
HCFC2-206ENST00000552343 PER1O15534 1290 aaPredicted RBP8.85□□□□□ -0.99
HCFC2-206ENST00000552343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.85□□□□□ -0.99
HCFC2-206ENST00000552343 ZBTB3Q9H5J0 574 aa8.85□□□□□ -0.99
HCFC2-206ENST00000552343 DIXDC1Q155Q3 683 aa8.84□□□□□ -0.99
HCFC2-206ENST00000552343 TSEN34Q9BSV6 310 aaKnown RBP8.84□□□□□ -0.99
HCFC2-206ENST00000552343 FSHRP23945 695 aa8.83□□□□□ -1
HCFC2-206ENST00000552343 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.83□□□□□ -1
HCFC2-206ENST00000552343 BARGINQ6ZT62 677 aa8.83□□□□□ -1
HCFC2-206ENST00000552343 CABLES1Q8TDN4 633 aa8.83□□□□□ -1
HCFC2-206ENST00000552343 C1QTNF2Q9BXJ5 285 aa8.83□□□□□ -1
HCFC2-206ENST00000552343 RNF225M0QZC1 329 aaPredicted RBP8.82□□□□□ -1
HCFC2-206ENST00000552343 PTSQ03393 145 aa8.82□□□□□ -1
HCFC2-206ENST00000552343 COL25A1Q9BXS0 654 aaPredicted RBP8.82□□□□□ -1
HCFC2-206ENST00000552343 FIGNL2A6NMB9 653 aa8.81□□□□□ -1
HCFC2-206ENST00000552343 TTLL8A6PVC2 850 aa8.81□□□□□ -1
HCFC2-206ENST00000552343 PRPF38BQ5VTL8 546 aaKnown RBP8.81□□□□□ -1
HCFC2-206ENST00000552343 RIC3Q7Z5B4 369 aa8.81□□□□□ -1
HCFC2-206ENST00000552343 SH3RF1Q7Z6J0 888 aa8.81□□□□□ -1
HCFC2-206ENST00000552343 MAP4K5Q9Y4K4 846 aa8.81□□□□□ -1
HCFC2-206ENST00000552343 CSPP1Q1MSJ5 1256 aa8.8□□□□□ -1
HCFC2-206ENST00000552343 ZNF385CQ66K41 422 aaPredicted RBP8.8□□□□□ -1
HCFC2-206ENST00000552343 VASH1Q7L8A9 365 aaPredicted RBP8.8□□□□□ -1
HCFC2-206ENST00000552343 EMILIN1Q9Y6C2 1016 aa8.8□□□□□ -1
HCFC2-206ENST00000552343 ZMYND10O75800 440 aa8.79□□□□□ -1
HCFC2-206ENST00000552343 RNFT1Q5M7Z0 435 aa8.79□□□□□ -1
HCFC2-206ENST00000552343 TRMT44Q8IYL2 757 aaKnown RBP8.79□□□□□ -1
HCFC2-206ENST00000552343 CCDC116Q8IYX3 515 aa8.79□□□□□ -1
HCFC2-206ENST00000552343 ARMC2Q8NEN0 867 aa8.79□□□□□ -1
HCFC2-206ENST00000552343 NANOS1Q8WY41 292 aaKnown RBP8.79□□□□□ -1
HCFC2-206ENST00000552343 TSC1Q92574 1164 aa8.79□□□□□ -1
HCFC2-206ENST00000552343 PARP9Q8IXQ6 854 aa8.78□□□□□ -1
HCFC2-206ENST00000552343 SVOPQ8N4V2 548 aa8.78□□□□□ -1
HCFC2-206ENST00000552343 CCDC155Q8N6L0 562 aa8.78□□□□□ -1
HCFC2-206ENST00000552343 MAGEB6P1A0A0J9YX57 407 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms