RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 SPSB2Q99619 263 aa12.5□□□□□ -0.41
BEST3-211ENST00000552295 EHBP1L1Q8N3D4 1523 aa12.49□□□□□ -0.41
BEST3-211ENST00000552295 GPR37O15354 613 aa12.49□□□□□ -0.41
BEST3-211ENST00000552295 PPARGC1BQ86YN6 1023 aaKnown RBP12.49□□□□□ -0.41
BEST3-211ENST00000552295 DDX11L8A8MPP1 907 aa12.47□□□□□ -0.41
BEST3-211ENST00000552295 DGAT1O75907 488 aa12.47□□□□□ -0.41
BEST3-211ENST00000552295 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
BEST3-211ENST00000552295 MTUS2Q5JR59 1369 aa12.45□□□□□ -0.42
BEST3-211ENST00000552295 TNFRSF10AO00220 468 aa12.45□□□□□ -0.42
BEST3-211ENST00000552295 PLA2G2CQ5R387 149 aa12.45□□□□□ -0.42
BEST3-211ENST00000552295 CYB5RLQ6IPT4 315 aa12.45□□□□□ -0.42
BEST3-211ENST00000552295 MORN1Q5T089 497 aa12.44□□□□□ -0.42
BEST3-211ENST00000552295 NLRP7Q8WX94 980 aa12.44□□□□□ -0.42
BEST3-211ENST00000552295 TROQ12816 1431 aaPredicted RBP12.44□□□□□ -0.42
BEST3-211ENST00000552295 FAM187AA6NFU0 413 aa12.43□□□□□ -0.42
BEST3-211ENST00000552295 GDF9O60383 454 aa12.43□□□□□ -0.42
BEST3-211ENST00000552295 MYT1Q01538 1121 aa12.43□□□□□ -0.42
BEST3-211ENST00000552295 FUT2Q10981 343 aa12.43□□□□□ -0.42
BEST3-211ENST00000552295 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
BEST3-211ENST00000552295 KIF14Q15058 1648 aa12.42□□□□□ -0.42
BEST3-211ENST00000552295 ATP6V1AP38606 617 aa12.42□□□□□ -0.42
BEST3-211ENST00000552295 GPIHBP1Q8IV16 184 aa12.42□□□□□ -0.42
BEST3-211ENST00000552295 CDK11AQ9UQ88 783 aaPredicted RBP12.42□□□□□ -0.42
BEST3-211ENST00000552295 NCOA2Q15596 1464 aa12.4□□□□□ -0.42
BEST3-211ENST00000552295 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
BEST3-211ENST00000552295 FMNL1O95466 1100 aaPredicted RBP12.4□□□□□ -0.42
BEST3-211ENST00000552295 GCGRP47871 477 aa12.4□□□□□ -0.42
BEST3-211ENST00000552295 WDR7Q9Y4E6 1490 aa12.39□□□□□ -0.43
BEST3-211ENST00000552295 ASXL2Q76L83 1435 aa12.38□□□□□ -0.43
BEST3-211ENST00000552295 MAPKBP1O60336 1514 aa12.38□□□□□ -0.43
BEST3-211ENST00000552295 RPIAP49247 311 aa12.38□□□□□ -0.43
BEST3-211ENST00000552295 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
BEST3-211ENST00000552295 LMOD2Q6P5Q4 547 aa12.38□□□□□ -0.43
BEST3-211ENST00000552295 THAP11Q96EK4 314 aa12.38□□□□□ -0.43
BEST3-211ENST00000552295 PHOX2BQ99453 314 aa12.38□□□□□ -0.43
BEST3-211ENST00000552295 SLC27A5Q9Y2P5 690 aa12.38□□□□□ -0.43
BEST3-211ENST00000552295 FCF1Q9Y324 198 aaKnown RBP12.37□□□□□ -0.43
BEST3-211ENST00000552295 PHLDB1Q86UU1 1377 aa12.37□□□□□ -0.43
BEST3-211ENST00000552295 ABCC10Q5T3U5 1492 aa12.36□□□□□ -0.43
BEST3-211ENST00000552295 FOXC1Q12948 553 aa12.36□□□□□ -0.43
BEST3-211ENST00000552295 CDC42BPAQ5VT25 1732 aa12.36□□□□□ -0.43
BEST3-211ENST00000552295 ITSN2Q9NZM3 1697 aa12.35□□□□□ -0.43
BEST3-211ENST00000552295 TTC37Q6PGP7 1564 aa12.35□□□□□ -0.43
BEST3-211ENST00000552295 ZNF775Q96BV0 537 aaPredicted RBP12.35□□□□□ -0.43
BEST3-211ENST00000552295 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
BEST3-211ENST00000552295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.35□□□□□ -0.43
BEST3-211ENST00000552295 FAM160A2Q8N612 972 aaPredicted RBP12.34□□□□□ -0.43
BEST3-211ENST00000552295 PKD2L1Q9P0L9 805 aa12.34□□□□□ -0.43
BEST3-211ENST00000552295 MYOM3Q5VTT5 1437 aa12.34□□□□□ -0.43
BEST3-211ENST00000552295 CD2BP2O95400 341 aaKnown RBP12.33□□□□□ -0.44
BEST3-211ENST00000552295 GRIPAP1Q4V328 841 aa12.33□□□□□ -0.44
BEST3-211ENST00000552295 MYO5CQ9NQX4 1742 aa12.33□□□□□ -0.44
BEST3-211ENST00000552295 ABCA9Q8IUA7 1624 aa12.33□□□□□ -0.44
BEST3-211ENST00000552295 RRBP1Q9P2E9 1410 aaKnown RBP12.32□□□□□ -0.44
BEST3-211ENST00000552295 BRICD5Q6PL45 260 aa12.32□□□□□ -0.44
BEST3-211ENST00000552295 PREX2Q70Z35 1606 aa12.32□□□□□ -0.44
BEST3-211ENST00000552295 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
BEST3-211ENST00000552295 CCNB3Q8WWL7 1395 aa12.31□□□□□ -0.44
BEST3-211ENST00000552295 CDC42BPBQ9Y5S2 1711 aa12.31□□□□□ -0.44
BEST3-211ENST00000552295 FGD6Q6ZV73 1430 aa12.31□□□□□ -0.44
BEST3-211ENST00000552295 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
BEST3-211ENST00000552295 PRDM9Q9NQV7 894 aa12.3□□□□□ -0.44
BEST3-211ENST00000552295 PTPN23Q9H3S7 1636 aa12.29□□□□□ -0.44
BEST3-211ENST00000552295 MSS51Q4VC12 460 aa12.29□□□□□ -0.44
BEST3-211ENST00000552295 DIP2BQ9P265 1576 aa12.29□□□□□ -0.44
BEST3-211ENST00000552295 MIA2Q96PC5 1412 aa12.28□□□□□ -0.44
BEST3-211ENST00000552295 GLI2P10070 1586 aa12.28□□□□□ -0.44
BEST3-211ENST00000552295 ST8SIA5O15466 376 aa12.28□□□□□ -0.44
BEST3-211ENST00000552295 RNF19BQ6ZMZ0 732 aa12.28□□□□□ -0.44
BEST3-211ENST00000552295 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.44
BEST3-211ENST00000552295 POTECB2RU33 542 aa12.27□□□□□ -0.45
BEST3-211ENST00000552295 TULP1O00294 542 aaPredicted RBP12.27□□□□□ -0.45
BEST3-211ENST00000552295 ZBTB24O43167 697 aaPredicted RBP12.27□□□□□ -0.45
BEST3-211ENST00000552295 MAP2K5Q13163 448 aa12.27□□□□□ -0.45
BEST3-211ENST00000552295 Q3C1V9 767 aa12.27□□□□□ -0.45
BEST3-211ENST00000552295 CYP4X1Q8N118 509 aa12.27□□□□□ -0.45
BEST3-211ENST00000552295 AAASQ9NRG9 546 aa12.27□□□□□ -0.45
BEST3-211ENST00000552295 KDM2AQ9Y2K7 1162 aa12.27□□□□□ -0.45
BEST3-211ENST00000552295 KIF13AQ9H1H9 1805 aa12.27□□□□□ -0.45
BEST3-211ENST00000552295 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.45
BEST3-211ENST00000552295 MAP3K4Q9Y6R4 1608 aa12.26□□□□□ -0.45
BEST3-211ENST00000552295 CD46P15529 392 aa12.25□□□□□ -0.45
BEST3-211ENST00000552295 TOR4AQ9NXH8 423 aa12.25□□□□□ -0.45
BEST3-211ENST00000552295 PLCH2O75038 1416 aa12.25□□□□□ -0.45
BEST3-211ENST00000552295 CAMSAP2Q08AD1 1489 aa12.24□□□□□ -0.45
BEST3-211ENST00000552295 ARHGAP5Q13017 1502 aa12.24□□□□□ -0.45
BEST3-211ENST00000552295 SAMD9LQ8IVG5 1584 aa12.24□□□□□ -0.45
BEST3-211ENST00000552295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.24□□□□□ -0.45
BEST3-211ENST00000552295 CFDP1Q9UEE9 299 aaPredicted RBP12.23□□□□□ -0.45
BEST3-211ENST00000552295 CRIPAKQ8N1N5 446 aa12.22□□□□□ -0.45
BEST3-211ENST00000552295 KDM4AO75164 1064 aa12.21□□□□□ -0.45
BEST3-211ENST00000552295 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
BEST3-211ENST00000552295 CD109Q6YHK3 1445 aa12.2□□□□□ -0.46
BEST3-211ENST00000552295 PPRC1Q5VV67 1664 aaKnown RBP12.2□□□□□ -0.46
BEST3-211ENST00000552295 ZNF644Q9H582 1327 aaPredicted RBP12.2□□□□□ -0.46
BEST3-211ENST00000552295 IRF6O14896 467 aa12.2□□□□□ -0.46
BEST3-211ENST00000552295 AVPP01185 164 aa12.2□□□□□ -0.46
BEST3-211ENST00000552295 MDM2Q00987 491 aaPredicted RBP12.2□□□□□ -0.46
BEST3-211ENST00000552295 FAM50AQ14320 339 aaKnown RBP12.2□□□□□ -0.46
BEST3-211ENST00000552295 PCGF6Q9BYE7 350 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms