RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 KLF16Q9BXK1 252 aaPredicted RBP6.87□□□□□ -1.31
CPNE8-208ENST00000551855 VARSP26640 1264 aaKnown RBP6.86□□□□□ -1.31
CPNE8-208ENST00000551855 WDR4P57081 412 aaKnown RBP6.86□□□□□ -1.31
CPNE8-208ENST00000551855 SUZ12Q15022 739 aaKnown RBP6.86□□□□□ -1.31
CPNE8-208ENST00000551855 VSIG10Q8N0Z9 540 aa6.86□□□□□ -1.31
CPNE8-208ENST00000551855 PRR7Q8TB68 274 aa6.86□□□□□ -1.31
CPNE8-208ENST00000551855 MPNDQ8N594 471 aa6.84□□□□□ -1.31
CPNE8-208ENST00000551855 KRI1Q8N9T8 703 aaKnown RBP6.84□□□□□ -1.31
CPNE8-208ENST00000551855 BCANQ96GW7 911 aa6.84□□□□□ -1.31
CPNE8-208ENST00000551855 PLEKHG3A1L390 1219 aa6.83□□□□□ -1.32
CPNE8-208ENST00000551855 ADH1CP00326 375 aa6.83□□□□□ -1.32
CPNE8-208ENST00000551855 SCARF1Q14162 830 aa6.83□□□□□ -1.32
CPNE8-208ENST00000551855 FOXJ1Q92949 421 aa6.83□□□□□ -1.32
CPNE8-208ENST00000551855 ZFAND3Q9H8U3 227 aa6.83□□□□□ -1.32
CPNE8-208ENST00000551855 VSIG8P0DPA2 414 aa6.82□□□□□ -1.32
CPNE8-208ENST00000551855 MTMR2Q13614 643 aa6.82□□□□□ -1.32
CPNE8-208ENST00000551855 NR3C2P08235 984 aa6.81□□□□□ -1.32
CPNE8-208ENST00000551855 ARID5BQ14865 1188 aa6.81□□□□□ -1.32
CPNE8-208ENST00000551855 C6orf118Q5T5N4 469 aa6.81□□□□□ -1.32
CPNE8-208ENST00000551855 ITPKCQ96DU7 683 aa6.81□□□□□ -1.32
CPNE8-208ENST00000551855 ZIC2O95409 532 aaPredicted RBP6.8□□□□□ -1.32
CPNE8-208ENST00000551855 CTHP32929 405 aa6.8□□□□□ -1.32
CPNE8-208ENST00000551855 GSK3AP49840 483 aa6.8□□□□□ -1.32
CPNE8-208ENST00000551855 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
CPNE8-208ENST00000551855 DESI1Q6ICB0 168 aa6.8□□□□□ -1.32
CPNE8-208ENST00000551855 LYPD8Q6UX82 237 aa6.8□□□□□ -1.32
CPNE8-208ENST00000551855 MAP10Q9P2G4 905 aa6.8□□□□□ -1.32
CPNE8-208ENST00000551855 PCDHB15Q9Y5E8 787 aa6.8□□□□□ -1.32
CPNE8-208ENST00000551855 PPFIA3O75145 1194 aa6.79□□□□□ -1.32
CPNE8-208ENST00000551855 TPRNQ4KMQ1 711 aa6.79□□□□□ -1.32
CPNE8-208ENST00000551855 FAM174AQ8TBP5 190 aa6.79□□□□□ -1.32
CPNE8-208ENST00000551855 CDK15Q96Q40 435 aa6.79□□□□□ -1.32
CPNE8-208ENST00000551855 CFAP99D6REC4 459 aa6.78□□□□□ -1.32
CPNE8-208ENST00000551855 TULP1O00294 542 aaPredicted RBP6.78□□□□□ -1.32
CPNE8-208ENST00000551855 MAN1A2O60476 641 aa6.78□□□□□ -1.32
CPNE8-208ENST00000551855 F12P00748 615 aaPredicted RBP6.78□□□□□ -1.32
CPNE8-208ENST00000551855 GRM5P41594 1212 aa6.78□□□□□ -1.32
CPNE8-208ENST00000551855 TTLL12Q14166 644 aaPredicted RBP6.77□□□□□ -1.33
CPNE8-208ENST00000551855 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.77□□□□□ -1.33
CPNE8-208ENST00000551855 KCTD17Q8N5Z5 321 aa6.77□□□□□ -1.33
CPNE8-208ENST00000551855 GPR161Q8N6U8 529 aaKnown RBP6.77□□□□□ -1.33
CPNE8-208ENST00000551855 BEGAINQ9BUH8 593 aa6.77□□□□□ -1.33
CPNE8-208ENST00000551855 SPDYE5A6NIY4 337 aa6.76□□□□□ -1.33
CPNE8-208ENST00000551855 HRCP23327 699 aa6.76□□□□□ -1.33
CPNE8-208ENST00000551855 KRT76Q01546 638 aa6.76□□□□□ -1.33
CPNE8-208ENST00000551855 KCNMA1Q12791 1236 aa6.76□□□□□ -1.33
CPNE8-208ENST00000551855 RSBN1LQ6PCB5 846 aaPredicted RBP6.76□□□□□ -1.33
CPNE8-208ENST00000551855 GIGYF2Q6Y7W6 1299 aaKnown RBP6.76□□□□□ -1.33
CPNE8-208ENST00000551855 TBC1D2Q9BYX2 928 aa6.76□□□□□ -1.33
CPNE8-208ENST00000551855 PER1O15534 1290 aaPredicted RBP6.75□□□□□ -1.33
CPNE8-208ENST00000551855 BMP2P12643 396 aa6.75□□□□□ -1.33
CPNE8-208ENST00000551855 DNMT3LQ9UJW3 386 aa6.75□□□□□ -1.33
CPNE8-208ENST00000551855 AMHR2Q16671 573 aa6.74□□□□□ -1.33
CPNE8-208ENST00000551855 LINC00528Q8N1L1 170 aa6.74□□□□□ -1.33
CPNE8-208ENST00000551855 CABLES1Q8TDN4 633 aa6.74□□□□□ -1.33
CPNE8-208ENST00000551855 SOS2Q07890 1332 aaPredicted RBP6.74□□□□□ -1.33
CPNE8-208ENST00000551855 NR5A1Q13285 461 aa6.73□□□□□ -1.33
CPNE8-208ENST00000551855 BARGINQ6ZT62 677 aa6.73□□□□□ -1.33
CPNE8-208ENST00000551855 MEIOBQ8N635 442 aa6.73□□□□□ -1.33
CPNE8-208ENST00000551855 SPTLC1O15269 473 aa6.72□□□□□ -1.33
CPNE8-208ENST00000551855 AGERQ15109 404 aa6.72□□□□□ -1.33
CPNE8-208ENST00000551855 CNTNAP3BQ96NU0 1288 aa6.72□□□□□ -1.33
CPNE8-208ENST00000551855 CNTNAP3Q9BZ76 1288 aa6.72□□□□□ -1.33
CPNE8-208ENST00000551855 GJA5P36382 358 aa6.71□□□□□ -1.34
CPNE8-208ENST00000551855 CSPP1Q1MSJ5 1256 aa6.71□□□□□ -1.34
CPNE8-208ENST00000551855 ZMYND10O75800 440 aa6.7□□□□□ -1.34
CPNE8-208ENST00000551855 BPHLQ86WA6 291 aaPredicted RBP6.7□□□□□ -1.34
CPNE8-208ENST00000551855 ZBTB3Q9H5J0 574 aa6.7□□□□□ -1.34
CPNE8-208ENST00000551855 ADAMTS8Q9UP79 889 aa6.7□□□□□ -1.34
CPNE8-208ENST00000551855 FIGNL2A6NMB9 653 aa6.69□□□□□ -1.34
CPNE8-208ENST00000551855 FSHRP23945 695 aa6.69□□□□□ -1.34
CPNE8-208ENST00000551855 RASSF7Q02833 373 aa6.69□□□□□ -1.34
CPNE8-208ENST00000551855 RIC3Q7Z5B4 369 aa6.69□□□□□ -1.34
CPNE8-208ENST00000551855 SH3RF1Q7Z6J0 888 aa6.69□□□□□ -1.34
CPNE8-208ENST00000551855 PARP9Q8IXQ6 854 aa6.69□□□□□ -1.34
CPNE8-208ENST00000551855 C1QTNF2Q9BXJ5 285 aa6.69□□□□□ -1.34
CPNE8-208ENST00000551855 UPP2O95045 317 aa6.68□□□□□ -1.34
CPNE8-208ENST00000551855 GDF11O95390 407 aa6.68□□□□□ -1.34
CPNE8-208ENST00000551855 PTSQ03393 145 aa6.68□□□□□ -1.34
CPNE8-208ENST00000551855 TMEM151AQ8N4L1 468 aa6.68□□□□□ -1.34
CPNE8-208ENST00000551855 TSC1Q92574 1164 aa6.68□□□□□ -1.34
CPNE8-208ENST00000551855 LIMD1Q9UGP4 676 aa6.68□□□□□ -1.34
CPNE8-208ENST00000551855 CBLBQ13191 982 aa6.67□□□□□ -1.34
CPNE8-208ENST00000551855 QPCTQ16769 361 aa6.67□□□□□ -1.34
CPNE8-208ENST00000551855 RNFT1Q5M7Z0 435 aa6.67□□□□□ -1.34
CPNE8-208ENST00000551855 PRPF38BQ5VTL8 546 aaKnown RBP6.67□□□□□ -1.34
CPNE8-208ENST00000551855 VASH1Q7L8A9 365 aaPredicted RBP6.67□□□□□ -1.34
CPNE8-208ENST00000551855 WHAMMQ8TF30 809 aa6.67□□□□□ -1.34
CPNE8-208ENST00000551855 ZC3H15Q8WU90 426 aaKnown RBP6.67□□□□□ -1.34
CPNE8-208ENST00000551855 COL25A1Q9BXS0 654 aaPredicted RBP6.67□□□□□ -1.34
CPNE8-208ENST00000551855 TTLL8A6PVC2 850 aa6.66□□□□□ -1.34
CPNE8-208ENST00000551855 ZNF385CQ66K41 422 aaPredicted RBP6.66□□□□□ -1.34
CPNE8-208ENST00000551855 SH3BP5LQ7L8J4 393 aa6.66□□□□□ -1.34
CPNE8-208ENST00000551855 MAGEB6P1A0A0J9YX57 407 aa6.65□□□□□ -1.34
CPNE8-208ENST00000551855 DIXDC1Q155Q3 683 aa6.65□□□□□ -1.34
CPNE8-208ENST00000551855 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.65□□□□□ -1.34
CPNE8-208ENST00000551855 TSEN34Q9BSV6 310 aaKnown RBP6.65□□□□□ -1.34
CPNE8-208ENST00000551855 MAP4K5Q9Y4K4 846 aa6.65□□□□□ -1.34
CPNE8-208ENST00000551855 TRIM66O15016 1216 aa6.64□□□□□ -1.35
CPNE8-208ENST00000551855 RTL5Q5HYW3 569 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms