RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.8	□□□□□ -0.36
ATXN2-223	ENST00000551551	PAK3	O75914	559 aa	Predicted RBP	12.79	□□□□□ -0.36
ATXN2-223	ENST00000551551	XPC	Q01831	940 aa	Predicted RBP	12.79	□□□□□ -0.36
ATXN2-223	ENST00000551551	NBPF8	Q3BBV2	869 aa		12.79	□□□□□ -0.36
ATXN2-223	ENST00000551551	LRP6	O75581	1613 aa		12.79	□□□□□ -0.36
ATXN2-223	ENST00000551551	NLRP13	Q86W25	1043 aa		12.78	□□□□□ -0.36
ATXN2-223	ENST00000551551	GJD4	Q96KN9	370 aa	Predicted RBP	12.78	□□□□□ -0.36
ATXN2-223	ENST00000551551	CARD11	Q9BXL7	1154 aa		12.78	□□□□□ -0.36
ATXN2-223	ENST00000551551	POLR3A	O14802	1390 aa	Predicted RBP	12.77	□□□□□ -0.37
ATXN2-223	ENST00000551551	ACE	P12821	1306 aa		12.76	□□□□□ -0.37
ATXN2-223	ENST00000551551	ATAD2	Q6PL18	1390 aa		12.76	□□□□□ -0.37
ATXN2-223	ENST00000551551	SBNO2	Q9Y2G9	1366 aa		12.76	□□□□□ -0.37
ATXN2-223	ENST00000551551	VPS72	Q15906	364 aa		12.75	□□□□□ -0.37
ATXN2-223	ENST00000551551	CDCA8	Q53HL2	280 aa		12.75	□□□□□ -0.37
ATXN2-223	ENST00000551551	ABTB2	Q8N961	1025 aa		12.75	□□□□□ -0.37
ATXN2-223	ENST00000551551	PRR36	Q9H6K5	1346 aa		12.75	□□□□□ -0.37
ATXN2-223	ENST00000551551	ATP7B	P35670	1465 aa		12.74	□□□□□ -0.37
ATXN2-223	ENST00000551551	C11orf95	C9JLR9	678 aa	Predicted RBP	12.73	□□□□□ -0.37
ATXN2-223	ENST00000551551	ONECUT3	O60422	494 aa	Predicted RBP	12.73	□□□□□ -0.37
ATXN2-223	ENST00000551551	ITSN1	Q15811	1721 aa		12.73	□□□□□ -0.37
ATXN2-223	ENST00000551551	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.72	□□□□□ -0.37
ATXN2-223	ENST00000551551	ZBTB22	O15209	634 aa		12.72	□□□□□ -0.37
ATXN2-223	ENST00000551551	KCNH5	Q8NCM2	988 aa		12.72	□□□□□ -0.37
ATXN2-223	ENST00000551551	TERF2IP	Q9NYB0	399 aa		12.72	□□□□□ -0.37
ATXN2-223	ENST00000551551	CABP1	Q9NZU7	370 aa		12.72	□□□□□ -0.37
ATXN2-223	ENST00000551551	BCL9L	Q86UU0	1499 aa		12.72	□□□□□ -0.37
ATXN2-223	ENST00000551551	ATRN	O75882	1429 aa		12.71	□□□□□ -0.37
ATXN2-223	ENST00000551551	TTC21A	Q8NDW8	1320 aa		12.71	□□□□□ -0.37
ATXN2-223	ENST00000551551	FAM83G	A6ND36	823 aa		12.71	□□□□□ -0.37
ATXN2-223	ENST00000551551	CABP2	Q9NPB3	220 aa		12.71	□□□□□ -0.37
ATXN2-223	ENST00000551551	PRDM11	Q9NQV5	511 aa		12.71	□□□□□ -0.37
ATXN2-223	ENST00000551551	PPIP5K1	Q6PFW1	1433 aa		12.71	□□□□□ -0.38
ATXN2-223	ENST00000551551	NINL	Q9Y2I6	1382 aa		12.7	□□□□□ -0.38
ATXN2-223	ENST00000551551	EVA1C	P58658	441 aa		12.7	□□□□□ -0.38
ATXN2-223	ENST00000551551	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.7	□□□□□ -0.38
ATXN2-223	ENST00000551551	CCDC9	Q9Y3X0	531 aa	Known RBP	12.7	□□□□□ -0.38
ATXN2-223	ENST00000551551	SLIT2	O94813	1529 aa		12.7	□□□□□ -0.38
ATXN2-223	ENST00000551551	CABLES1	Q8TDN4	633 aa		12.69	□□□□□ -0.38
ATXN2-223	ENST00000551551	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.69	□□□□□ -0.38
ATXN2-223	ENST00000551551	BTG4	Q9NY30	223 aa		12.69	□□□□□ -0.38
ATXN2-223	ENST00000551551	NLRP6	P59044	892 aa		12.68	□□□□□ -0.38
ATXN2-223	ENST00000551551	THRAP3	Q9Y2W1	955 aa	Known RBP	12.68	□□□□□ -0.38
ATXN2-223	ENST00000551551	RGPD8	O14715	1765 aa	Predicted RBP	12.68	□□□□□ -0.38
ATXN2-223	ENST00000551551	TRPM1	Q7Z4N2	1603 aa		12.67	□□□□□ -0.38
ATXN2-223	ENST00000551551	USP32	Q8NFA0	1604 aa		12.67	□□□□□ -0.38
ATXN2-223	ENST00000551551	GC	P02774	474 aa		12.67	□□□□□ -0.38
ATXN2-223	ENST00000551551	SF3B2	Q13435	895 aa	Known RBP	12.67	□□□□□ -0.38
ATXN2-223	ENST00000551551	CPD	O75976	1380 aa		12.67	□□□□□ -0.38
ATXN2-223	ENST00000551551	RALGAPB	Q86X10	1494 aa		12.66	□□□□□ -0.38
ATXN2-223	ENST00000551551	TMF1	P82094	1093 aa		12.66	□□□□□ -0.38
ATXN2-223	ENST00000551551	MARF1	Q9Y4F3	1742 aa	Known RBP	12.65	□□□□□ -0.38
ATXN2-223	ENST00000551551	PCGF6	Q9BYE7	350 aa		12.65	□□□□□ -0.38
ATXN2-223	ENST00000551551	SEPT12	Q8IYM1	358 aa		12.64	□□□□□ -0.39
ATXN2-223	ENST00000551551	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.64	□□□□□ -0.39
ATXN2-223	ENST00000551551	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.64	□□□□□ -0.39
ATXN2-223	ENST00000551551	NWD2	Q9ULI1	1742 aa		12.64	□□□□□ -0.39
ATXN2-223	ENST00000551551	USP19	O94966	1318 aa		12.63	□□□□□ -0.39
ATXN2-223	ENST00000551551	USP6	P35125	1406 aa		12.63	□□□□□ -0.39
ATXN2-223	ENST00000551551	BARGIN	Q6ZT62	677 aa		12.63	□□□□□ -0.39
ATXN2-223	ENST00000551551	KRT27	Q7Z3Y8	459 aa		12.63	□□□□□ -0.39
ATXN2-223	ENST00000551551	CCER1	Q8TC90	406 aa	Predicted RBP	12.63	□□□□□ -0.39
ATXN2-223	ENST00000551551	TMC1	Q8TDI8	760 aa		12.63	□□□□□ -0.39
ATXN2-223	ENST00000551551	KTN1	Q86UP2	1357 aa	Known RBP	12.63	□□□□□ -0.39
ATXN2-223	ENST00000551551	TTC21B	Q7Z4L5	1316 aa		12.62	□□□□□ -0.39
ATXN2-223	ENST00000551551	ALS2	Q96Q42	1657 aa		12.62	□□□□□ -0.39
ATXN2-223	ENST00000551551	ST20-MTHFS	A0A0A6YYL1	179 aa		12.62	□□□□□ -0.39
ATXN2-223	ENST00000551551	ZC3H6	P61129	1189 aa	Known RBP	12.62	□□□□□ -0.39
ATXN2-223	ENST00000551551	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.62	□□□□□ -0.39
ATXN2-223	ENST00000551551	RGS12	O14924	1447 aa		12.62	□□□□□ -0.39
ATXN2-223	ENST00000551551	SPATA31A5	Q5VU36	1347 aa		12.62	□□□□□ -0.39
ATXN2-223	ENST00000551551	SPATA31A7	Q8IWB4	1347 aa		12.62	□□□□□ -0.39
ATXN2-223	ENST00000551551	COL14A1	Q05707	1796 aa	Known RBP	12.61	□□□□□ -0.39
ATXN2-223	ENST00000551551	QRICH2	Q9H0J4	1663 aa		12.61	□□□□□ -0.39
ATXN2-223	ENST00000551551	AATK	Q6ZMQ8	1374 aa		12.61	□□□□□ -0.39
ATXN2-223	ENST00000551551	KIAA0232	Q92628	1395 aa		12.61	□□□□□ -0.39
ATXN2-223	ENST00000551551		A0A0G2JS52	829 aa		12.61	□□□□□ -0.39
ATXN2-223	ENST00000551551	NPM3	O75607	178 aa	Known RBP	12.61	□□□□□ -0.39
ATXN2-223	ENST00000551551	MYT1	Q01538	1121 aa		12.61	□□□□□ -0.39
ATXN2-223	ENST00000551551	CPSF1	Q10570	1443 aa	Known RBP	12.61	□□□□□ -0.39
ATXN2-223	ENST00000551551	PLEKHG5	O94827	1062 aa		12.6	□□□□□ -0.39
ATXN2-223	ENST00000551551	TCP11L2	Q8N4U5	519 aa		12.6	□□□□□ -0.39
ATXN2-223	ENST00000551551	PDE3B	Q13370	1112 aa		12.59	□□□□□ -0.39
ATXN2-223	ENST00000551551	FAM196A	Q6ZSG2	479 aa		12.59	□□□□□ -0.39
ATXN2-223	ENST00000551551	SSH2	Q76I76	1423 aa		12.59	□□□□□ -0.39
ATXN2-223	ENST00000551551	SPATA31A1	Q5TZJ5	1347 aa		12.59	□□□□□ -0.39
ATXN2-223	ENST00000551551	TOPAZ1	Q8N9V7	1692 aa		12.58	□□□□□ -0.4
ATXN2-223	ENST00000551551	FAM98C	Q17RN3	349 aa	Known RBP	12.58	□□□□□ -0.4
ATXN2-223	ENST00000551551	NUTM2G	Q5VZR2	741 aa		12.58	□□□□□ -0.4
ATXN2-223	ENST00000551551	TESK2	Q96S53	571 aa		12.58	□□□□□ -0.4
ATXN2-223	ENST00000551551	STRN4	Q9NRL3	753 aa		12.58	□□□□□ -0.4
ATXN2-223	ENST00000551551	ZRANB1	Q9UGI0	708 aa		12.58	□□□□□ -0.4
ATXN2-223	ENST00000551551	USP31	Q70CQ4	1352 aa		12.57	□□□□□ -0.4
ATXN2-223	ENST00000551551	BLM	P54132	1417 aa	Predicted RBP	12.57	□□□□□ -0.4
ATXN2-223	ENST00000551551	EDC4	Q6P2E9	1401 aa	Known RBP	12.57	□□□□□ -0.4
ATXN2-223	ENST00000551551	ARHGEF25	Q86VW2	580 aa		12.57	□□□□□ -0.4
ATXN2-223	ENST00000551551	HMGB2	P26583	209 aa	Known RBP	12.56	□□□□□ -0.4
ATXN2-223	ENST00000551551	BAG6	P46379	1132 aa		12.56	□□□□□ -0.4
ATXN2-223	ENST00000551551	SLC12A5	Q9H2X9	1139 aa		12.56	□□□□□ -0.4
ATXN2-223	ENST00000551551	USP47	Q96K76	1375 aa		12.56	□□□□□ -0.4
ATXN2-223	ENST00000551551	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.55	□□□□□ -0.4

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