RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CABP1Q9NZU7 370 aa26.94■■□□□ 1.9
DDX54-208ENST00000551344 BCL9LQ86UU0 1499 aa26.93■■□□□ 1.9
DDX54-208ENST00000551344 MARF1Q9Y4F3 1742 aaKnown RBP26.93■■□□□ 1.9
DDX54-208ENST00000551344 TOPAZ1Q8N9V7 1692 aa26.93■■□□□ 1.9
DDX54-208ENST00000551344 UNC5CLQ8IV45 518 aa26.92■■□□□ 1.9
DDX54-208ENST00000551344 SBNO2Q9Y2G9 1366 aa26.92■■□□□ 1.9
DDX54-208ENST00000551344 ALS2Q96Q42 1657 aa26.92■■□□□ 1.9
DDX54-208ENST00000551344 SLIT2O94813 1529 aa26.9■■□□□ 1.9
DDX54-208ENST00000551344 ATRNO75882 1429 aa26.9■■□□□ 1.9
DDX54-208ENST00000551344 BRD4O60885 1362 aaPredicted RBP26.89■■□□□ 1.9
DDX54-208ENST00000551344 FAM83GA6ND36 823 aa26.88■■□□□ 1.89
DDX54-208ENST00000551344 ABTB2Q8N961 1025 aa26.87■■□□□ 1.89
DDX54-208ENST00000551344 GJD4Q96KN9 370 aaPredicted RBP26.86■■□□□ 1.89
DDX54-208ENST00000551344 ZNF692Q9BU19 519 aaPredicted RBP26.86■■□□□ 1.89
DDX54-208ENST00000551344 ATAD2Q6PL18 1390 aa26.85■■□□□ 1.89
DDX54-208ENST00000551344 SLC24A1O60721 1099 aa26.84■■□□□ 1.89
DDX54-208ENST00000551344 NUTM2GQ5VZR2 741 aa26.83■■□□□ 1.89
DDX54-208ENST00000551344 ABCA3Q99758 1704 aa26.82■■□□□ 1.88
DDX54-208ENST00000551344 NLRP13Q86W25 1043 aa26.82■■□□□ 1.88
DDX54-208ENST00000551344 CCER1Q8TC90 406 aaPredicted RBP26.81■■□□□ 1.88
DDX54-208ENST00000551344 PUS7Q96PZ0 661 aaKnown RBP26.81■■□□□ 1.88
DDX54-208ENST00000551344 RGS12O14924 1447 aa26.81■■□□□ 1.88
DDX54-208ENST00000551344 ST20-MTHFSA0A0A6YYL1 179 aa26.8■■□□□ 1.88
DDX54-208ENST00000551344 VPS72Q15906 364 aa26.8■■□□□ 1.88
DDX54-208ENST00000551344 USP6P35125 1406 aa26.8■■□□□ 1.88
DDX54-208ENST00000551344 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.79■■□□□ 1.88
DDX54-208ENST00000551344 PRDM11Q9NQV5 511 aa26.78■■□□□ 1.88
DDX54-208ENST00000551344 BTG4Q9NY30 223 aa26.78■■□□□ 1.88
DDX54-208ENST00000551344 TESK2Q96S53 571 aa26.77■■□□□ 1.88
DDX54-208ENST00000551344 SSH2Q76I76 1423 aa26.76■■□□□ 1.87
DDX54-208ENST00000551344 NWD2Q9ULI1 1742 aa26.76■■□□□ 1.87
DDX54-208ENST00000551344 USP19O94966 1318 aa26.75■■□□□ 1.87
DDX54-208ENST00000551344 CPSF1Q10570 1443 aaKnown RBP26.74■■□□□ 1.87
DDX54-208ENST00000551344 CRYBG1Q9Y4K1 1723 aa26.74■■□□□ 1.87
DDX54-208ENST00000551344 NLRP6P59044 892 aa26.74■■□□□ 1.87
DDX54-208ENST00000551344 ZC3H6P61129 1189 aaKnown RBP26.74■■□□□ 1.87
DDX54-208ENST00000551344 UPF1Q92900 1129 aaKnown RBP eCLIP26.74■■□□□ 1.87
DDX54-208ENST00000551344 KIAA0232Q92628 1395 aa26.73■■□□□ 1.87
DDX54-208ENST00000551344 GCP02774 474 aa26.73■■□□□ 1.87
DDX54-208ENST00000551344 CCDC9Q9Y3X0 531 aaKnown RBP26.73■■□□□ 1.87
DDX54-208ENST00000551344 TTC21BQ7Z4L5 1316 aa26.72■■□□□ 1.87
DDX54-208ENST00000551344 COL14A1Q05707 1796 aaKnown RBP26.72■■□□□ 1.87
DDX54-208ENST00000551344 PLCH1Q4KWH8 1693 aa26.72■■□□□ 1.87
DDX54-208ENST00000551344 ONECUT3O60422 494 aaPredicted RBP26.71■■□□□ 1.87
DDX54-208ENST00000551344 TMC1Q8TDI8 760 aa26.71■■□□□ 1.87
DDX54-208ENST00000551344 KTN1Q86UP2 1357 aaKnown RBP26.71■■□□□ 1.87
DDX54-208ENST00000551344 TTC21AQ8NDW8 1320 aa26.7■■□□□ 1.87
DDX54-208ENST00000551344 USP47Q96K76 1375 aa26.7■■□□□ 1.86
DDX54-208ENST00000551344 CHRNA2Q15822 529 aa26.69■■□□□ 1.86
DDX54-208ENST00000551344 SLC12A5Q9H2X9 1139 aa26.69■■□□□ 1.86
DDX54-208ENST00000551344 CPDO75976 1380 aa26.69■■□□□ 1.86
DDX54-208ENST00000551344 PHRF1Q9P1Y6 1649 aaKnown RBP26.68■■□□□ 1.86
DDX54-208ENST00000551344 GLI3P10071 1580 aa26.67■■□□□ 1.86
DDX54-208ENST00000551344 HDGFL2Q7Z4V5 671 aaPredicted RBP26.67■■□□□ 1.86
DDX54-208ENST00000551344 TERF2IPQ9NYB0 399 aa26.67■■□□□ 1.86
DDX54-208ENST00000551344 TMF1P82094 1093 aa26.65■■□□□ 1.86
DDX54-208ENST00000551344 SEPT12Q8IYM1 358 aa26.65■■□□□ 1.86
DDX54-208ENST00000551344 AKAP12Q02952 1782 aa26.64■■□□□ 1.86
DDX54-208ENST00000551344 SPATA31A5Q5VU36 1347 aa26.64■■□□□ 1.85
DDX54-208ENST00000551344 SPATA31A7Q8IWB4 1347 aa26.64■■□□□ 1.85
DDX54-208ENST00000551344 NINLQ9Y2I6 1382 aa26.63■■□□□ 1.85
DDX54-208ENST00000551344 EVA1CP58658 441 aa26.63■■□□□ 1.85
DDX54-208ENST00000551344 NRKQ7Z2Y5 1582 aa26.63■■□□□ 1.85
DDX54-208ENST00000551344 CD163L1Q9NR16 1453 aa26.62■■□□□ 1.85
DDX54-208ENST00000551344 NRAPQ86VF7 1730 aa26.62■■□□□ 1.85
DDX54-208ENST00000551344 KCNH5Q8NCM2 988 aa26.62■■□□□ 1.85
DDX54-208ENST00000551344 CDCA8Q53HL2 280 aa26.6■■□□□ 1.85
DDX54-208ENST00000551344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.6■■□□□ 1.85
DDX54-208ENST00000551344 STRN4Q9NRL3 753 aa26.6■■□□□ 1.85
DDX54-208ENST00000551344 SLIT3O75094 1523 aa26.6■■□□□ 1.85
DDX54-208ENST00000551344 FAM98CQ17RN3 349 aaKnown RBP26.59■■□□□ 1.85
DDX54-208ENST00000551344 PIK3C2AO00443 1686 aa26.59■■□□□ 1.85
DDX54-208ENST00000551344 SPATA31A1Q5TZJ5 1347 aa26.57■■□□□ 1.84
DDX54-208ENST00000551344 A0A1W2PP64 1363 aa26.57■■□□□ 1.84
DDX54-208ENST00000551344 AATKQ6ZMQ8 1374 aa26.57■■□□□ 1.84
DDX54-208ENST00000551344 USP31Q70CQ4 1352 aa26.57■■□□□ 1.84
DDX54-208ENST00000551344 CAMTA1Q9Y6Y1 1673 aa26.56■■□□□ 1.84
DDX54-208ENST00000551344 MON2Q7Z3U7 1717 aa26.56■■□□□ 1.84
DDX54-208ENST00000551344 EDC4Q6P2E9 1401 aaKnown RBP26.56■■□□□ 1.84
DDX54-208ENST00000551344 ARHGEF25Q86VW2 580 aa26.55■■□□□ 1.84
DDX54-208ENST00000551344 CCDC125Q86Z20 511 aa26.55■■□□□ 1.84
DDX54-208ENST00000551344 A0A0G2JS52 829 aa26.54■■□□□ 1.84
DDX54-208ENST00000551344 MYT1Q01538 1121 aa26.54■■□□□ 1.84
DDX54-208ENST00000551344 KRT27Q7Z3Y8 459 aa26.54■■□□□ 1.84
DDX54-208ENST00000551344 NME9Q86XW9 330 aa26.54■■□□□ 1.84
DDX54-208ENST00000551344 ZBTB7CA1YPR0 619 aa26.53■■□□□ 1.84
DDX54-208ENST00000551344 LARP1Q6PKG0 1096 aaKnown RBP26.53■■□□□ 1.84
DDX54-208ENST00000551344 ZRANB1Q9UGI0 708 aa26.52■■□□□ 1.84
DDX54-208ENST00000551344 LMO7Q8WWI1 1683 aa26.51■■□□□ 1.83
DDX54-208ENST00000551344 SOX12O15370 315 aa26.5■■□□□ 1.83
DDX54-208ENST00000551344 BARGINQ6ZT62 677 aa26.5■■□□□ 1.83
DDX54-208ENST00000551344 ANKRD36BQ8N2N9 1353 aa26.49■■□□□ 1.83
DDX54-208ENST00000551344 EIF4G2P78344 907 aaKnown RBP eCLIP26.49■■□□□ 1.83
DDX54-208ENST00000551344 TCP11L2Q8N4U5 519 aa26.49■■□□□ 1.83
DDX54-208ENST00000551344 USP35Q9P2H5 1018 aa26.49■■□□□ 1.83
DDX54-208ENST00000551344 THRAP3Q9Y2W1 955 aaKnown RBP26.49■■□□□ 1.83
DDX54-208ENST00000551344 AXIN2Q9Y2T1 843 aa26.48■■□□□ 1.83
DDX54-208ENST00000551344 COL5A2P05997 1499 aaPredicted RBP26.48■■□□□ 1.83
DDX54-208ENST00000551344 BRWD3Q6RI45 1802 aa26.47■■□□□ 1.83
DDX54-208ENST00000551344 NFAT5O94916 1531 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms