RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, humanhuman

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-215ENST00000551223 USP6P35125 1406 aa13.27□□□□□ -0.29
PFDN5-215ENST00000551223 CPSF1Q10570 1443 aaKnown RBP13.27□□□□□ -0.29
PFDN5-215ENST00000551223 ALS2Q96Q42 1657 aa13.27□□□□□ -0.29
PFDN5-215ENST00000551223 BRD4O60885 1362 aaPredicted RBP13.26□□□□□ -0.29
PFDN5-215ENST00000551223 CDCA8Q53HL2 280 aa13.26□□□□□ -0.29
PFDN5-215ENST00000551223 RGS17Q9UGC6 210 aaPredicted RBP13.26□□□□□ -0.29
PFDN5-215ENST00000551223 CD163L1Q9NR16 1453 aa13.25□□□□□ -0.29
PFDN5-215ENST00000551223 SSH2Q76I76 1423 aa13.25□□□□□ -0.29
PFDN5-215ENST00000551223 NUTM2GQ5VZR2 741 aa13.25□□□□□ -0.29
PFDN5-215ENST00000551223 ABTB2Q8N961 1025 aa13.25□□□□□ -0.29
PFDN5-215ENST00000551223 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
PFDN5-215ENST00000551223 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
PFDN5-215ENST00000551223 AKAP12Q02952 1782 aa13.24□□□□□ -0.29
PFDN5-215ENST00000551223 NINLQ9Y2I6 1382 aa13.23□□□□□ -0.29
PFDN5-215ENST00000551223 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
PFDN5-215ENST00000551223 HAP1P54257 671 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-215ENST00000551223 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-215ENST00000551223 NGLY1Q96IV0 654 aa13.23□□□□□ -0.29
PFDN5-215ENST00000551223 TERF2IPQ9NYB0 399 aa13.23□□□□□ -0.29
PFDN5-215ENST00000551223 A0A1W2PP64 1363 aa13.21□□□□□ -0.29
PFDN5-215ENST00000551223 AFF2P51816 1311 aa13.21□□□□□ -0.29
PFDN5-215ENST00000551223 C11orf95C9JLR9 678 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-215ENST00000551223 NLRP13Q86W25 1043 aa13.21□□□□□ -0.29
PFDN5-215ENST00000551223 TTC21AQ8NDW8 1320 aa13.2□□□□□ -0.3
PFDN5-215ENST00000551223 MON2Q7Z3U7 1717 aa13.2□□□□□ -0.3
PFDN5-215ENST00000551223 ABCA3Q99758 1704 aa13.2□□□□□ -0.3
PFDN5-215ENST00000551223 NLRP6P59044 892 aa13.2□□□□□ -0.3
PFDN5-215ENST00000551223 POTEAQ6S8J7 498 aa13.2□□□□□ -0.3
PFDN5-215ENST00000551223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
PFDN5-215ENST00000551223 FNBP4Q8N3X1 1017 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-215ENST00000551223 POLR3GLQ9BT43 218 aa13.2□□□□□ -0.3
PFDN5-215ENST00000551223 USP19O94966 1318 aa13.19□□□□□ -0.3
PFDN5-215ENST00000551223 ZNF772Q68DY9 489 aaPredicted RBP13.19□□□□□ -0.3
PFDN5-215ENST00000551223 NRKQ7Z2Y5 1582 aa13.19□□□□□ -0.3
PFDN5-215ENST00000551223 MARF1Q9Y4F3 1742 aaKnown RBP13.19□□□□□ -0.3
PFDN5-215ENST00000551223 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
PFDN5-215ENST00000551223 ANKRD36BQ8N2N9 1353 aa13.19□□□□□ -0.3
PFDN5-215ENST00000551223 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
PFDN5-215ENST00000551223 ILDR2Q71H61 639 aa13.18□□□□□ -0.3
PFDN5-215ENST00000551223 EDC4Q6P2E9 1401 aaKnown RBP13.18□□□□□ -0.3
PFDN5-215ENST00000551223 PIK3C2AO00443 1686 aa13.18□□□□□ -0.3
PFDN5-215ENST00000551223 GCP02774 474 aa13.17□□□□□ -0.3
PFDN5-215ENST00000551223 NME9Q86XW9 330 aa13.17□□□□□ -0.3
PFDN5-215ENST00000551223 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
PFDN5-215ENST00000551223 USP21Q9UK80 565 aa13.17□□□□□ -0.3
PFDN5-215ENST00000551223 MYOM1P52179 1685 aa13.16□□□□□ -0.3
PFDN5-215ENST00000551223 ZC3H6P61129 1189 aaKnown RBP13.16□□□□□ -0.3
PFDN5-215ENST00000551223 CARD14Q9BXL6 1004 aa13.16□□□□□ -0.3
PFDN5-215ENST00000551223 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
PFDN5-215ENST00000551223 PHRF1Q9P1Y6 1649 aaKnown RBP13.16□□□□□ -0.3
PFDN5-215ENST00000551223 SLIT2O94813 1529 aa13.15□□□□□ -0.3
PFDN5-215ENST00000551223 QTRT2Q9H974 415 aaKnown RBP13.15□□□□□ -0.3
PFDN5-215ENST00000551223 PRDM11Q9NQV5 511 aa13.15□□□□□ -0.3
PFDN5-215ENST00000551223 USP31Q70CQ4 1352 aa13.15□□□□□ -0.3
PFDN5-215ENST00000551223 BCL9LQ86UU0 1499 aa13.15□□□□□ -0.3
PFDN5-215ENST00000551223 KIF7Q2M1P5 1343 aa13.14□□□□□ -0.31
PFDN5-215ENST00000551223 SLIT3O75094 1523 aa13.14□□□□□ -0.31
PFDN5-215ENST00000551223 CPDO75976 1380 aa13.13□□□□□ -0.31
PFDN5-215ENST00000551223 CHRNA2Q15822 529 aa13.13□□□□□ -0.31
PFDN5-215ENST00000551223 UNC5CLQ8IV45 518 aa13.13□□□□□ -0.31
PFDN5-215ENST00000551223 KCNH5Q8NCM2 988 aa13.13□□□□□ -0.31
PFDN5-215ENST00000551223 TRPC5Q9UL62 973 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-215ENST00000551223 FYB1O15117 783 aa13.12□□□□□ -0.31
PFDN5-215ENST00000551223 SOX12O15370 315 aa13.12□□□□□ -0.31
PFDN5-215ENST00000551223 ZEB1P37275 1124 aaPredicted RBP13.12□□□□□ -0.31
PFDN5-215ENST00000551223 BTG4Q9NY30 223 aa13.12□□□□□ -0.31
PFDN5-215ENST00000551223 COL14A1Q05707 1796 aaKnown RBP13.12□□□□□ -0.31
PFDN5-215ENST00000551223 RXRBP28702 533 aa13.11□□□□□ -0.31
PFDN5-215ENST00000551223 PANK3Q9H999 370 aa13.11□□□□□ -0.31
PFDN5-215ENST00000551223 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
PFDN5-215ENST00000551223 ATRNO75882 1429 aa13.11□□□□□ -0.31
PFDN5-215ENST00000551223 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
PFDN5-215ENST00000551223 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
PFDN5-215ENST00000551223 PLCH1Q4KWH8 1693 aa13.11□□□□□ -0.31
PFDN5-215ENST00000551223 USP54Q70EL1 1684 aa13.1□□□□□ -0.31
PFDN5-215ENST00000551223 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
PFDN5-215ENST00000551223 RBM6P78332 1123 aaKnown RBP13.1□□□□□ -0.31
PFDN5-215ENST00000551223 ARHGEF25Q86VW2 580 aa13.1□□□□□ -0.31
PFDN5-215ENST00000551223 COG3Q96JB2 828 aa13.1□□□□□ -0.31
PFDN5-215ENST00000551223 GGNBP2Q9H3C7 697 aa13.1□□□□□ -0.31
PFDN5-215ENST00000551223 NWD2Q9ULI1 1742 aa13.1□□□□□ -0.31
PFDN5-215ENST00000551223 WASHC2AQ641Q2 1341 aa13.1□□□□□ -0.31
PFDN5-215ENST00000551223 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
PFDN5-215ENST00000551223 VPS72Q15906 364 aa13.09□□□□□ -0.31
PFDN5-215ENST00000551223 GJD4Q96KN9 370 aaPredicted RBP13.09□□□□□ -0.31
PFDN5-215ENST00000551223 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.09□□□□□ -0.31
PFDN5-215ENST00000551223 NFAT5O94916 1531 aa13.08□□□□□ -0.31
PFDN5-215ENST00000551223 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.32
PFDN5-215ENST00000551223 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
PFDN5-215ENST00000551223 STRN4Q9NRL3 753 aa13.07□□□□□ -0.32
PFDN5-215ENST00000551223 NRAPQ86VF7 1730 aa13.07□□□□□ -0.32
PFDN5-215ENST00000551223 CGNL1Q0VF96 1302 aa13.07□□□□□ -0.32
PFDN5-215ENST00000551223 LMO7Q8WWI1 1683 aa13.06□□□□□ -0.32
PFDN5-215ENST00000551223 FBLN1P23142 703 aa13.06□□□□□ -0.32
PFDN5-215ENST00000551223 EVA1CP58658 441 aa13.06□□□□□ -0.32
PFDN5-215ENST00000551223 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
PFDN5-215ENST00000551223 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
PFDN5-215ENST00000551223 COL18A1P39060 1754 aa13.05□□□□□ -0.32
PFDN5-215ENST00000551223 KIF20BQ96Q89 1820 aa13.05□□□□□ -0.32
PFDN5-215ENST00000551223 CDK12Q9NYV4 1490 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms