RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 PNNQ9H307 717 aaKnown RBP19.04■□□□□ 0.64
SCN8A-207ENST00000551216 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
SCN8A-207ENST00000551216 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
SCN8A-207ENST00000551216 PLEKHG3A1L390 1219 aa19.03■□□□□ 0.64
SCN8A-207ENST00000551216 CCDC146Q8IYE0 955 aa19.03■□□□□ 0.64
SCN8A-207ENST00000551216 SENP3-EIF4A1A0A087X0R7 540 aa19.02■□□□□ 0.64
SCN8A-207ENST00000551216 AMOTL2Q9Y2J4 779 aa19.02■□□□□ 0.64
SCN8A-207ENST00000551216 NKTRP30414 1462 aaKnown RBP19.02■□□□□ 0.63
SCN8A-207ENST00000551216 WDR63Q8IWG1 891 aa19■□□□□ 0.63
SCN8A-207ENST00000551216 SLC26A8Q96RN1 970 aa19■□□□□ 0.63
SCN8A-207ENST00000551216 NRKQ7Z2Y5 1582 aa19■□□□□ 0.63
SCN8A-207ENST00000551216 WWC1Q8IX03 1113 aa19■□□□□ 0.63
SCN8A-207ENST00000551216 MAP2P11137 1827 aaKnown RBP18.99■□□□□ 0.63
SCN8A-207ENST00000551216 PRR36Q9H6K5 1346 aa18.98■□□□□ 0.63
SCN8A-207ENST00000551216 ANKLE2Q86XL3 938 aa18.98■□□□□ 0.63
SCN8A-207ENST00000551216 TCP11L2Q8N4U5 519 aa18.98■□□□□ 0.63
SCN8A-207ENST00000551216 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.98■□□□□ 0.63
SCN8A-207ENST00000551216 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
SCN8A-207ENST00000551216 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
SCN8A-207ENST00000551216 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
SCN8A-207ENST00000551216 U2AF1L5P0DN76 240 aaPredicted RBP18.97■□□□□ 0.63
SCN8A-207ENST00000551216 U2AF1Q01081 240 aaKnown RBP eCLIP18.97■□□□□ 0.63
SCN8A-207ENST00000551216 CHD2O14647 1828 aaKnown RBP18.96■□□□□ 0.62
SCN8A-207ENST00000551216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.95■□□□□ 0.62
SCN8A-207ENST00000551216 COG3Q96JB2 828 aa18.95■□□□□ 0.62
SCN8A-207ENST00000551216 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
SCN8A-207ENST00000551216 USP6P35125 1406 aa18.93■□□□□ 0.62
SCN8A-207ENST00000551216 FCHSD2O94868 740 aa18.93■□□□□ 0.62
SCN8A-207ENST00000551216 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
SCN8A-207ENST00000551216 PLEKHF1Q96S99 279 aa18.93■□□□□ 0.62
SCN8A-207ENST00000551216 TSHZ2Q9NRE2 1034 aa18.93■□□□□ 0.62
SCN8A-207ENST00000551216 TTC21AQ8NDW8 1320 aa18.93■□□□□ 0.62
SCN8A-207ENST00000551216 NALCNQ8IZF0 1738 aa18.92■□□□□ 0.62
SCN8A-207ENST00000551216 SSH2Q76I76 1423 aa18.91■□□□□ 0.62
SCN8A-207ENST00000551216 B4GALNT3Q6L9W6 998 aa18.91■□□□□ 0.62
SCN8A-207ENST00000551216 FMN2Q9NZ56 1722 aa18.91■□□□□ 0.62
SCN8A-207ENST00000551216 ACEP12821 1306 aa18.91■□□□□ 0.62
SCN8A-207ENST00000551216 MAPK8IP3Q9UPT6 1336 aa18.91■□□□□ 0.62
SCN8A-207ENST00000551216 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
SCN8A-207ENST00000551216 NME9Q86XW9 330 aa18.9■□□□□ 0.62
SCN8A-207ENST00000551216 TTC21BQ7Z4L5 1316 aa18.9■□□□□ 0.62
SCN8A-207ENST00000551216 CT47B1P0C2W7 299 aaPredicted RBP18.89■□□□□ 0.62
SCN8A-207ENST00000551216 MYH16Q9H6N6 1097 aa18.89■□□□□ 0.62
SCN8A-207ENST00000551216 OVOS2A0A0J9YW53 1432 aa18.89■□□□□ 0.61
SCN8A-207ENST00000551216 OVOS2Q6IE36 1432 aa18.89■□□□□ 0.61
SCN8A-207ENST00000551216 IL16Q14005 1332 aa18.89■□□□□ 0.61
SCN8A-207ENST00000551216 U2SURPO15042 1029 aaKnown RBP18.89■□□□□ 0.61
SCN8A-207ENST00000551216 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
SCN8A-207ENST00000551216 NEFMP07197 916 aa18.88■□□□□ 0.61
SCN8A-207ENST00000551216 SPINK5Q9NQ38 1064 aaPredicted RBP18.88■□□□□ 0.61
SCN8A-207ENST00000551216 USP31Q70CQ4 1352 aa18.87■□□□□ 0.61
SCN8A-207ENST00000551216 KCNA6P17658 529 aa18.86■□□□□ 0.61
SCN8A-207ENST00000551216 TMPOP42166 694 aaKnown RBP18.86■□□□□ 0.61
SCN8A-207ENST00000551216 NCKAP5LQ9HCH0 1330 aa18.86■□□□□ 0.61
SCN8A-207ENST00000551216 USP54Q70EL1 1684 aa18.86■□□□□ 0.61
SCN8A-207ENST00000551216 EXOC6Q8TAG9 804 aa18.85■□□□□ 0.61
SCN8A-207ENST00000551216 NPHP4O75161 1426 aaPredicted RBP18.84■□□□□ 0.61
SCN8A-207ENST00000551216 RGPD8O14715 1765 aaPredicted RBP18.84■□□□□ 0.61
SCN8A-207ENST00000551216 IL13P35225 146 aa18.83■□□□□ 0.61
SCN8A-207ENST00000551216 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.61
SCN8A-207ENST00000551216 PDE3AQ14432 1141 aa18.82■□□□□ 0.6
SCN8A-207ENST00000551216 NEUROD2Q15784 382 aa18.82■□□□□ 0.6
SCN8A-207ENST00000551216 RSPH6AQ9H0K4 717 aa18.82■□□□□ 0.6
SCN8A-207ENST00000551216 RRP7AQ9Y3A4 280 aaKnown RBP18.82■□□□□ 0.6
SCN8A-207ENST00000551216 NWD1Q149M9 1564 aa18.81■□□□□ 0.6
SCN8A-207ENST00000551216 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
SCN8A-207ENST00000551216 AAMPQ13685 434 aa18.81■□□□□ 0.6
SCN8A-207ENST00000551216 KIF24Q5T7B8 1368 aa18.81■□□□□ 0.6
SCN8A-207ENST00000551216 ADGRL3Q9HAR2 1447 aa18.8■□□□□ 0.6
SCN8A-207ENST00000551216 EMILIN1Q9Y6C2 1016 aa18.8■□□□□ 0.6
SCN8A-207ENST00000551216 PPM1GO15355 546 aaPredicted RBP18.79■□□□□ 0.6
SCN8A-207ENST00000551216 NGDNQ8NEJ9 315 aaKnown RBP18.79■□□□□ 0.6
SCN8A-207ENST00000551216 TRIM35Q9UPQ4 493 aa18.79■□□□□ 0.6
SCN8A-207ENST00000551216 PLIN1O60240 522 aa18.78■□□□□ 0.6
SCN8A-207ENST00000551216 RIPK4P57078 832 aa18.78■□□□□ 0.6
SCN8A-207ENST00000551216 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
SCN8A-207ENST00000551216 ZRANB1Q9UGI0 708 aa18.78■□□□□ 0.6
SCN8A-207ENST00000551216 PRKAR2BP31323 418 aa18.77■□□□□ 0.6
SCN8A-207ENST00000551216 LMOD3Q0VAK6 560 aa18.77■□□□□ 0.6
SCN8A-207ENST00000551216 NFE2L2Q16236 605 aa18.76■□□□□ 0.59
SCN8A-207ENST00000551216 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
SCN8A-207ENST00000551216 RGPD1P0DJD0 1748 aa18.76■□□□□ 0.59
SCN8A-207ENST00000551216 RARSP54136 660 aaKnown RBP18.75■□□□□ 0.59
SCN8A-207ENST00000551216 ZNF428Q96B54 188 aa18.75■□□□□ 0.59
SCN8A-207ENST00000551216 NUTM2FA1L443 756 aa18.74■□□□□ 0.59
SCN8A-207ENST00000551216 RRS1Q15050 365 aaKnown RBP18.74■□□□□ 0.59
SCN8A-207ENST00000551216 SBNO1A3KN83 1393 aa18.73■□□□□ 0.59
SCN8A-207ENST00000551216 FANCIQ9NVI1 1328 aa18.73■□□□□ 0.59
SCN8A-207ENST00000551216 MS4A1P11836 297 aa18.73■□□□□ 0.59
SCN8A-207ENST00000551216 FBLN1P23142 703 aa18.73■□□□□ 0.59
SCN8A-207ENST00000551216 PMFBP1Q8TBY8 1022 aa18.73■□□□□ 0.59
SCN8A-207ENST00000551216 FLT4P35916 1363 aa18.73■□□□□ 0.59
SCN8A-207ENST00000551216 BCAR3O75815 825 aa18.72■□□□□ 0.59
SCN8A-207ENST00000551216 C20orf194Q5TEA3 1177 aa18.72■□□□□ 0.59
SCN8A-207ENST00000551216 PEAK1Q9H792 1746 aa18.72■□□□□ 0.59
SCN8A-207ENST00000551216 RBM19Q9Y4C8 960 aaKnown RBP18.71■□□□□ 0.59
SCN8A-207ENST00000551216 PHF8Q9UPP1 1060 aa18.71■□□□□ 0.58
SCN8A-207ENST00000551216 ARHGEF10O15013 1369 aa18.7■□□□□ 0.58
SCN8A-207ENST00000551216 MARF1Q9Y4F3 1742 aaKnown RBP18.7■□□□□ 0.58
SCN8A-207ENST00000551216 NCOA3Q9Y6Q9 1424 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms