RNA–Protein interactions for RNA: ENST00000551206.5

USP15-217, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-217ENST00000551206 CABP1Q9NZU7 370 aa18.47■□□□□ 0.55
USP15-217ENST00000551206 RALGAPBQ86X10 1494 aa18.46■□□□□ 0.55
USP15-217ENST00000551206 USP21Q9UK80 565 aa18.46■□□□□ 0.55
USP15-217ENST00000551206 QRICH2Q9H0J4 1663 aa18.46■□□□□ 0.55
USP15-217ENST00000551206 ARHGEF10O15013 1369 aa18.45■□□□□ 0.54
USP15-217ENST00000551206 RXRBP28702 533 aa18.45■□□□□ 0.54
USP15-217ENST00000551206 PPIP5K1Q6PFW1 1433 aa18.44■□□□□ 0.54
USP15-217ENST00000551206 NUTM2GQ5VZR2 741 aa18.44■□□□□ 0.54
USP15-217ENST00000551206 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
USP15-217ENST00000551206 COL22A1Q8NFW1 1626 aaPredicted RBP18.44■□□□□ 0.54
USP15-217ENST00000551206 FNBP4Q8N3X1 1017 aaPredicted RBP18.43■□□□□ 0.54
USP15-217ENST00000551206 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
USP15-217ENST00000551206 ST20-MTHFSA0A0A6YYL1 179 aa18.41■□□□□ 0.54
USP15-217ENST00000551206 POTEHQ6S545 545 aa18.4■□□□□ 0.54
USP15-217ENST00000551206 ABTB2Q8N961 1025 aa18.4■□□□□ 0.54
USP15-217ENST00000551206 ITSN1Q15811 1721 aa18.39■□□□□ 0.53
USP15-217ENST00000551206 FAM83GA6ND36 823 aa18.38■□□□□ 0.53
USP15-217ENST00000551206 RBM6P78332 1123 aaKnown RBP18.38■□□□□ 0.53
USP15-217ENST00000551206 TRPC5Q9UL62 973 aaPredicted RBP18.38■□□□□ 0.53
USP15-217ENST00000551206 TMC1Q8TDI8 760 aa18.37■□□□□ 0.53
USP15-217ENST00000551206 TRPM3Q9HCF6 1732 aaPredicted RBP18.37■□□□□ 0.53
USP15-217ENST00000551206 TOPAZ1Q8N9V7 1692 aa18.35■□□□□ 0.53
USP15-217ENST00000551206 ATAD2Q6PL18 1390 aa18.35■□□□□ 0.53
USP15-217ENST00000551206 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
USP15-217ENST00000551206 UNC5CLQ8IV45 518 aa18.35■□□□□ 0.53
USP15-217ENST00000551206 TESK2Q96S53 571 aa18.35■□□□□ 0.53
USP15-217ENST00000551206 BCL9LQ86UU0 1499 aa18.34■□□□□ 0.53
USP15-217ENST00000551206 USP47Q96K76 1375 aa18.33■□□□□ 0.53
USP15-217ENST00000551206 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
USP15-217ENST00000551206 ZNF692Q9BU19 519 aaPredicted RBP18.33■□□□□ 0.52
USP15-217ENST00000551206 SLC12A5Q9H2X9 1139 aa18.33■□□□□ 0.52
USP15-217ENST00000551206 ALS2Q96Q42 1657 aa18.32■□□□□ 0.52
USP15-217ENST00000551206 NLRP6P59044 892 aa18.32■□□□□ 0.52
USP15-217ENST00000551206 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
USP15-217ENST00000551206 PRDM11Q9NQV5 511 aa18.32■□□□□ 0.52
USP15-217ENST00000551206 CCDC9Q9Y3X0 531 aaKnown RBP18.32■□□□□ 0.52
USP15-217ENST00000551206 USP6P35125 1406 aa18.32■□□□□ 0.52
USP15-217ENST00000551206 CHRNA2Q15822 529 aa18.31■□□□□ 0.52
USP15-217ENST00000551206 GJD4Q96KN9 370 aaPredicted RBP18.31■□□□□ 0.52
USP15-217ENST00000551206 BTG4Q9NY30 223 aa18.31■□□□□ 0.52
USP15-217ENST00000551206 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
USP15-217ENST00000551206 ATRNO75882 1429 aa18.3■□□□□ 0.52
USP15-217ENST00000551206 MARF1Q9Y4F3 1742 aaKnown RBP18.29■□□□□ 0.52
USP15-217ENST00000551206 SLIT2O94813 1529 aa18.29■□□□□ 0.52
USP15-217ENST00000551206 KTN1Q86UP2 1357 aaKnown RBP18.29■□□□□ 0.52
USP15-217ENST00000551206 KIAA0232Q92628 1395 aa18.29■□□□□ 0.52
USP15-217ENST00000551206 TTC21BQ7Z4L5 1316 aa18.28■□□□□ 0.52
USP15-217ENST00000551206 TMF1P82094 1093 aa18.28■□□□□ 0.52
USP15-217ENST00000551206 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.28■□□□□ 0.52
USP15-217ENST00000551206 PUS7Q96PZ0 661 aaKnown RBP18.28■□□□□ 0.52
USP15-217ENST00000551206 BRD4O60885 1362 aaPredicted RBP18.28■□□□□ 0.52
USP15-217ENST00000551206 ZBTB7CA1YPR0 619 aa18.27■□□□□ 0.52
USP15-217ENST00000551206 GCP02774 474 aa18.27■□□□□ 0.52
USP15-217ENST00000551206 HDGFL2Q7Z4V5 671 aaPredicted RBP18.27■□□□□ 0.52
USP15-217ENST00000551206 CPSF1Q10570 1443 aaKnown RBP18.26■□□□□ 0.51
USP15-217ENST00000551206 VPS72Q15906 364 aa18.26■□□□□ 0.51
USP15-217ENST00000551206 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
USP15-217ENST00000551206 ABCA3Q99758 1704 aa18.26■□□□□ 0.51
USP15-217ENST00000551206 SSH2Q76I76 1423 aa18.25■□□□□ 0.51
USP15-217ENST00000551206 SOX12O15370 315 aa18.25■□□□□ 0.51
USP15-217ENST00000551206 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
USP15-217ENST00000551206 CDK12Q9NYV4 1490 aaPredicted RBP18.25■□□□□ 0.51
USP15-217ENST00000551206 USP19O94966 1318 aa18.24■□□□□ 0.51
USP15-217ENST00000551206 RGS12O14924 1447 aa18.24■□□□□ 0.51
USP15-217ENST00000551206 EVA1CP58658 441 aa18.24■□□□□ 0.51
USP15-217ENST00000551206 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
USP15-217ENST00000551206 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
USP15-217ENST00000551206 NME9Q86XW9 330 aa18.22■□□□□ 0.51
USP15-217ENST00000551206 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
USP15-217ENST00000551206 CDCA8Q53HL2 280 aa18.21■□□□□ 0.51
USP15-217ENST00000551206 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
USP15-217ENST00000551206 A0A0G2JS52 829 aa18.2■□□□□ 0.5
USP15-217ENST00000551206 EIF4G2P78344 907 aaKnown RBP eCLIP18.2■□□□□ 0.53e-6■■■■■ 33.4
USP15-217ENST00000551206 MYT1Q01538 1121 aa18.2■□□□□ 0.5
USP15-217ENST00000551206 A0A1W2PP64 1363 aa18.19■□□□□ 0.5
USP15-217ENST00000551206 PLCH1Q4KWH8 1693 aa18.19■□□□□ 0.5
USP15-217ENST00000551206 SEPT12Q8IYM1 358 aa18.19■□□□□ 0.5
USP15-217ENST00000551206 UPF1Q92900 1129 aaKnown RBP eCLIP18.19■□□□□ 0.5
USP15-217ENST00000551206 POLR3GLQ9BT43 218 aa18.19■□□□□ 0.5
USP15-217ENST00000551206 CRYBG1Q9Y4K1 1723 aa18.19■□□□□ 0.5
USP15-217ENST00000551206 COL14A1Q05707 1796 aaKnown RBP18.19■□□□□ 0.5
USP15-217ENST00000551206 CPDO75976 1380 aa18.18■□□□□ 0.5
USP15-217ENST00000551206 HSPA5P11021 654 aaKnown RBP18.18■□□□□ 0.5
USP15-217ENST00000551206 FAM98CQ17RN3 349 aaKnown RBP18.18■□□□□ 0.5
USP15-217ENST00000551206 KCNH5Q8NCM2 988 aa18.18■□□□□ 0.5
USP15-217ENST00000551206 USP35Q9P2H5 1018 aa18.18■□□□□ 0.5
USP15-217ENST00000551206 PHRF1Q9P1Y6 1649 aaKnown RBP18.18■□□□□ 0.5
USP15-217ENST00000551206 AKAP12Q02952 1782 aa18.17■□□□□ 0.5
USP15-217ENST00000551206 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.17■□□□□ 0.5
USP15-217ENST00000551206 NWD2Q9ULI1 1742 aa18.17■□□□□ 0.5
USP15-217ENST00000551206 SPATA31A5Q5VU36 1347 aa18.17■□□□□ 0.5
USP15-217ENST00000551206 SPATA31A7Q8IWB4 1347 aa18.17■□□□□ 0.5
USP15-217ENST00000551206 NINLQ9Y2I6 1382 aa18.17■□□□□ 0.5
USP15-217ENST00000551206 LARP1Q6PKG0 1096 aaKnown RBP18.16■□□□□ 0.5
USP15-217ENST00000551206 GLI3P10071 1580 aa18.16■□□□□ 0.5
USP15-217ENST00000551206 PIK3C2AO00443 1686 aa18.15■□□□□ 0.5
USP15-217ENST00000551206 ONECUT3O60422 494 aaPredicted RBP18.15■□□□□ 0.5
USP15-217ENST00000551206 NRKQ7Z2Y5 1582 aa18.15■□□□□ 0.5
USP15-217ENST00000551206 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
USP15-217ENST00000551206 DSG3P32926 999 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms