RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-212ENST00000551111 BTG4Q9NY30 223 aa16.89■□□□□ 0.29
PRPF40B-212ENST00000551111 KIAA1210Q9ULL0 1709 aa16.89■□□□□ 0.29
PRPF40B-212ENST00000551111 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
PRPF40B-212ENST00000551111 CCDC125Q86Z20 511 aa16.88■□□□□ 0.29
PRPF40B-212ENST00000551111 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
PRPF40B-212ENST00000551111 CDK19Q9BWU1 502 aa16.87■□□□□ 0.29
PRPF40B-212ENST00000551111 PHRF1Q9P1Y6 1649 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-212ENST00000551111 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-212ENST00000551111 FAM98CQ17RN3 349 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-212ENST00000551111 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
PRPF40B-212ENST00000551111 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-212ENST00000551111 FAM182BQ5T319 152 aa16.85■□□□□ 0.29
PRPF40B-212ENST00000551111 KRT27Q7Z3Y8 459 aa16.85■□□□□ 0.29
PRPF40B-212ENST00000551111 ZRANB1Q9UGI0 708 aa16.85■□□□□ 0.29
PRPF40B-212ENST00000551111 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
PRPF40B-212ENST00000551111 ACEP12821 1306 aa16.83■□□□□ 0.28
PRPF40B-212ENST00000551111 KIAA0232Q92628 1395 aa16.82■□□□□ 0.28
PRPF40B-212ENST00000551111 A0A0G2JS52 829 aa16.82■□□□□ 0.28
PRPF40B-212ENST00000551111 MYT1Q01538 1121 aa16.82■□□□□ 0.28
PRPF40B-212ENST00000551111 THSD7AQ9UPZ6 1657 aa16.81■□□□□ 0.28
PRPF40B-212ENST00000551111 POLR3AO14802 1390 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-212ENST00000551111 SPATA31A5Q5VU36 1347 aa16.81■□□□□ 0.28
PRPF40B-212ENST00000551111 SPATA31A7Q8IWB4 1347 aa16.81■□□□□ 0.28
PRPF40B-212ENST00000551111 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-212ENST00000551111 NBPF8Q3BBV2 869 aa16.81■□□□□ 0.28
PRPF40B-212ENST00000551111 PRDM11Q9NQV5 511 aa16.81■□□□□ 0.28
PRPF40B-212ENST00000551111 QRICH2Q9H0J4 1663 aa16.81■□□□□ 0.28
PRPF40B-212ENST00000551111 CCDC61Q9Y6R9 512 aa16.79■□□□□ 0.28
PRPF40B-212ENST00000551111 PLEKHG3A1L390 1219 aa16.78■□□□□ 0.28
PRPF40B-212ENST00000551111 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
PRPF40B-212ENST00000551111 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.28
PRPF40B-212ENST00000551111 TNS1Q9HBL0 1735 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-212ENST00000551111 CABP2Q9NPB3 220 aa16.77■□□□□ 0.28
PRPF40B-212ENST00000551111 STRN4Q9NRL3 753 aa16.77■□□□□ 0.28
PRPF40B-212ENST00000551111 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
PRPF40B-212ENST00000551111 CAMTA1Q9Y6Y1 1673 aa16.76■□□□□ 0.27
PRPF40B-212ENST00000551111 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-212ENST00000551111 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
PRPF40B-212ENST00000551111 LMO7Q8WWI1 1683 aa16.75■□□□□ 0.27
PRPF40B-212ENST00000551111 SPATA31A1Q5TZJ5 1347 aa16.75■□□□□ 0.27
PRPF40B-212ENST00000551111 PPIP5K1Q6PFW1 1433 aa16.75■□□□□ 0.27
PRPF40B-212ENST00000551111 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
PRPF40B-212ENST00000551111 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-212ENST00000551111 ABTB2Q8N961 1025 aa16.74■□□□□ 0.27
PRPF40B-212ENST00000551111 USP35Q9P2H5 1018 aa16.74■□□□□ 0.27
PRPF40B-212ENST00000551111 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-212ENST00000551111 SRPK2P78362 688 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-212ENST00000551111 EN1Q05925 392 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-212ENST00000551111 LARP1Q6PKG0 1096 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-212ENST00000551111 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
PRPF40B-212ENST00000551111 USP19O94966 1318 aa16.71■□□□□ 0.27
PRPF40B-212ENST00000551111 SSH2Q76I76 1423 aa16.71■□□□□ 0.27
PRPF40B-212ENST00000551111 BAG6P46379 1132 aa16.7■□□□□ 0.26
PRPF40B-212ENST00000551111 CABP1Q9NZU7 370 aa16.7■□□□□ 0.26
PRPF40B-212ENST00000551111 PIK3C2AO00443 1686 aa16.69■□□□□ 0.26
PRPF40B-212ENST00000551111 GCP02774 474 aa16.69■□□□□ 0.26
PRPF40B-212ENST00000551111 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
PRPF40B-212ENST00000551111 COL18A1P39060 1754 aa16.69■□□□□ 0.26
PRPF40B-212ENST00000551111 TRIM37O94972 964 aa16.68■□□□□ 0.26
PRPF40B-212ENST00000551111 EVA1CP58658 441 aa16.68■□□□□ 0.26
PRPF40B-212ENST00000551111 AKAP12Q02952 1782 aa16.68■□□□□ 0.26
PRPF40B-212ENST00000551111 CPDO75976 1380 aa16.67■□□□□ 0.26
PRPF40B-212ENST00000551111 EZH2Q15910 746 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-212ENST00000551111 USP6P35125 1406 aa16.67■□□□□ 0.26
PRPF40B-212ENST00000551111 LRP5O75197 1615 aa16.67■□□□□ 0.26
PRPF40B-212ENST00000551111 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
PRPF40B-212ENST00000551111 ZBTB7CA1YPR0 619 aa16.65■□□□□ 0.26
PRPF40B-212ENST00000551111 COL5A2P05997 1499 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-212ENST00000551111 SBF2Q86WG5 1849 aa16.65■□□□□ 0.26
PRPF40B-212ENST00000551111 NLRP6P59044 892 aa16.64■□□□□ 0.25
PRPF40B-212ENST00000551111 BARGINQ6ZT62 677 aa16.64■□□□□ 0.25
PRPF40B-212ENST00000551111 CAMKK2Q96RR4 588 aa16.64■□□□□ 0.25
PRPF40B-212ENST00000551111 PARP4Q9UKK3 1724 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-212ENST00000551111 SLIT3O75094 1523 aa16.64■□□□□ 0.25
PRPF40B-212ENST00000551111 DISP2A7MBM2 1401 aa16.63■□□□□ 0.25
PRPF40B-212ENST00000551111 R3HDM1Q15032 1099 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-212ENST00000551111 FAM196AQ6ZSG2 479 aa16.63■□□□□ 0.25
PRPF40B-212ENST00000551111 TCP11L2Q8N4U5 519 aa16.63■□□□□ 0.25
PRPF40B-212ENST00000551111 RREB1Q92766 1687 aa16.62■□□□□ 0.25
PRPF40B-212ENST00000551111 NUP188Q5SRE5 1749 aa16.62■□□□□ 0.25
PRPF40B-212ENST00000551111 AXIN2Q9Y2T1 843 aa16.62■□□□□ 0.25
PRPF40B-212ENST00000551111 WNK3Q9BYP7 1800 aa16.61■□□□□ 0.25
PRPF40B-212ENST00000551111 EVC2Q86UK5 1308 aa16.61■□□□□ 0.25
PRPF40B-212ENST00000551111 PEAK1Q9H792 1746 aa16.61■□□□□ 0.25
PRPF40B-212ENST00000551111 ROCK2O75116 1388 aaKnown RBP16.61■□□□□ 0.25
PRPF40B-212ENST00000551111 APBA3O96018 575 aa16.6■□□□□ 0.25
PRPF40B-212ENST00000551111 PDE3BQ13370 1112 aa16.6■□□□□ 0.25
PRPF40B-212ENST00000551111 TTC21BQ7Z4L5 1316 aa16.59■□□□□ 0.25
PRPF40B-212ENST00000551111 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
PRPF40B-212ENST00000551111 LRRC37A3O60309 1634 aa16.59■□□□□ 0.25
PRPF40B-212ENST00000551111 SOX12O15370 315 aa16.58■□□□□ 0.24
PRPF40B-212ENST00000551111 AATKQ6ZMQ8 1374 aa16.58■□□□□ 0.24
PRPF40B-212ENST00000551111 CRB1P82279 1406 aa16.58■□□□□ 0.24
PRPF40B-212ENST00000551111 MON2Q7Z3U7 1717 aa16.58■□□□□ 0.24
PRPF40B-212ENST00000551111 PTF1AQ7RTS3 328 aa16.57■□□□□ 0.24
PRPF40B-212ENST00000551111 CPSF1Q10570 1443 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-212ENST00000551111 THRAP3Q9Y2W1 955 aaKnown RBP16.56■□□□□ 0.24
PRPF40B-212ENST00000551111 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
PRPF40B-212ENST00000551111 NFAT5O94916 1531 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms