RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 NME9Q86XW9 330 aa20.28■□□□□ 0.84
SCN8A-206ENST00000550891 CEP170BQ9Y4F5 1589 aaPredicted RBP20.28■□□□□ 0.84
SCN8A-206ENST00000550891 TSHZ2Q9NRE2 1034 aa20.27■□□□□ 0.84
SCN8A-206ENST00000550891 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
SCN8A-206ENST00000550891 SHPRHQ149N8 1683 aa20.26■□□□□ 0.83
SCN8A-206ENST00000550891 ANKRD26Q9UPS8 1709 aa20.26■□□□□ 0.83
SCN8A-206ENST00000550891 PRR36Q9H6K5 1346 aa20.26■□□□□ 0.83
SCN8A-206ENST00000550891 DIP2AQ14689 1571 aa20.26■□□□□ 0.83
SCN8A-206ENST00000550891 KIF20BQ96Q89 1820 aa20.26■□□□□ 0.83
SCN8A-206ENST00000550891 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
SCN8A-206ENST00000550891 PLIN1O60240 522 aa20.25■□□□□ 0.83
SCN8A-206ENST00000550891 PTCH1Q13635 1447 aa20.24■□□□□ 0.83
SCN8A-206ENST00000550891 ACEP12821 1306 aa20.24■□□□□ 0.83
SCN8A-206ENST00000550891 EXOC6Q8TAG9 804 aa20.23■□□□□ 0.83
SCN8A-206ENST00000550891 NKTRP30414 1462 aaKnown RBP20.23■□□□□ 0.83
SCN8A-206ENST00000550891 POLKQ9UBT6 870 aa20.23■□□□□ 0.83
SCN8A-206ENST00000550891 WDR63Q8IWG1 891 aa20.22■□□□□ 0.83
SCN8A-206ENST00000550891 NGDNQ8NEJ9 315 aaKnown RBP20.22■□□□□ 0.83
SCN8A-206ENST00000550891 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
SCN8A-206ENST00000550891 ADGRB2O60241 1585 aa20.21■□□□□ 0.83
SCN8A-206ENST00000550891 PLEKHG3A1L390 1219 aa20.21■□□□□ 0.83
SCN8A-206ENST00000550891 KCNA6P17658 529 aa20.21■□□□□ 0.83
SCN8A-206ENST00000550891 TRMT2AQ8IZ69 625 aaKnown RBP20.21■□□□□ 0.83
SCN8A-206ENST00000550891 SPINK5Q9NQ38 1064 aaPredicted RBP20.21■□□□□ 0.83
SCN8A-206ENST00000550891 FBLN1P23142 703 aa20.21■□□□□ 0.83
SCN8A-206ENST00000550891 CCDC27Q2M243 656 aa20.21■□□□□ 0.83
SCN8A-206ENST00000550891 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
SCN8A-206ENST00000550891 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
SCN8A-206ENST00000550891 MYH16Q9H6N6 1097 aa20.19■□□□□ 0.82
SCN8A-206ENST00000550891 PMFBP1Q8TBY8 1022 aa20.19■□□□□ 0.82
SCN8A-206ENST00000550891 TTC21BQ7Z4L5 1316 aa20.19■□□□□ 0.82
SCN8A-206ENST00000550891 PNPLA6Q8IY17 1366 aa20.19■□□□□ 0.82
SCN8A-206ENST00000550891 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
SCN8A-206ENST00000550891 EMILIN1Q9Y6C2 1016 aa20.19■□□□□ 0.82
SCN8A-206ENST00000550891 ITSN1Q15811 1721 aa20.18■□□□□ 0.82
SCN8A-206ENST00000550891 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
SCN8A-206ENST00000550891 IQSEC2Q5JU85 1478 aa20.17■□□□□ 0.82
SCN8A-206ENST00000550891 CANXP27824 592 aaKnown RBP20.17■□□□□ 0.82
SCN8A-206ENST00000550891 FCHSD2O94868 740 aa20.17■□□□□ 0.82
SCN8A-206ENST00000550891 COL3A1P02461 1466 aaPredicted RBP20.17■□□□□ 0.82
SCN8A-206ENST00000550891 AATKQ6ZMQ8 1374 aa20.16■□□□□ 0.82
SCN8A-206ENST00000550891 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
SCN8A-206ENST00000550891 RRS1Q15050 365 aaKnown RBP20.15■□□□□ 0.82
SCN8A-206ENST00000550891 CRBNQ96SW2 442 aa20.15■□□□□ 0.82
SCN8A-206ENST00000550891 SETD1BQ9UPS6 1966 aaKnown RBP20.15■□□□□ 0.82
SCN8A-206ENST00000550891 ADAMTSL3P82987 1691 aa20.15■□□□□ 0.82
SCN8A-206ENST00000550891 MON2Q7Z3U7 1717 aa20.14■□□□□ 0.82
SCN8A-206ENST00000550891 USP6P35125 1406 aa20.14■□□□□ 0.81
SCN8A-206ENST00000550891 PLEKHF1Q96S99 279 aa20.14■□□□□ 0.81
SCN8A-206ENST00000550891 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
SCN8A-206ENST00000550891 RIPK4P57078 832 aa20.14■□□□□ 0.81
SCN8A-206ENST00000550891 C14orf37Q86TY3 774 aa20.14■□□□□ 0.81
SCN8A-206ENST00000550891 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
SCN8A-206ENST00000550891 TTC21AQ8NDW8 1320 aa20.12■□□□□ 0.81
SCN8A-206ENST00000550891 SOX12O15370 315 aa20.12■□□□□ 0.81
SCN8A-206ENST00000550891 HMOX1P09601 288 aa20.12■□□□□ 0.81
SCN8A-206ENST00000550891 AKAP12Q02952 1782 aa20.12■□□□□ 0.81
SCN8A-206ENST00000550891 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
SCN8A-206ENST00000550891 BCAR3O75815 825 aa20.1■□□□□ 0.81
SCN8A-206ENST00000550891 MAP2P11137 1827 aaKnown RBP20.1■□□□□ 0.81
SCN8A-206ENST00000550891 XRN1Q8IZH2 1706 aaKnown RBP20.09■□□□□ 0.81
SCN8A-206ENST00000550891 C20orf194Q5TEA3 1177 aa20.09■□□□□ 0.81
SCN8A-206ENST00000550891 ZNF142P52746 1687 aaPredicted RBP20.09■□□□□ 0.81
SCN8A-206ENST00000550891 ANKARQ7Z5J8 1434 aa20.08■□□□□ 0.81
SCN8A-206ENST00000550891 IL13P35225 146 aa20.08■□□□□ 0.81
SCN8A-206ENST00000550891 RSPH6AQ9H0K4 717 aa20.08■□□□□ 0.81
SCN8A-206ENST00000550891 TOPAZ1Q8N9V7 1692 aa20.07■□□□□ 0.8
SCN8A-206ENST00000550891 FRAT1Q92837 279 aaPredicted RBP20.07■□□□□ 0.8
SCN8A-206ENST00000550891 NPHP4O75161 1426 aaPredicted RBP20.07■□□□□ 0.8
SCN8A-206ENST00000550891 PAK3O75914 559 aaPredicted RBP20.06■□□□□ 0.8
SCN8A-206ENST00000550891 CALD1Q05682 793 aaKnown RBP20.05■□□□□ 0.8
SCN8A-206ENST00000550891 RBM33Q96EV2 1170 aaKnown RBP20.05■□□□□ 0.8
SCN8A-206ENST00000550891 TRIM35Q9UPQ4 493 aa20.05■□□□□ 0.8
SCN8A-206ENST00000550891 RBM19Q9Y4C8 960 aaKnown RBP20.05■□□□□ 0.8
SCN8A-206ENST00000550891 IL16Q14005 1332 aa20.04■□□□□ 0.8
SCN8A-206ENST00000550891 NLRP6P59044 892 aa20.04■□□□□ 0.8
SCN8A-206ENST00000550891 OVOS2A0A0J9YW53 1432 aa20.04■□□□□ 0.8
SCN8A-206ENST00000550891 OVOS2Q6IE36 1432 aa20.04■□□□□ 0.8
SCN8A-206ENST00000550891 NFE2L2Q16236 605 aa20.04■□□□□ 0.8
SCN8A-206ENST00000550891 TSR2Q969E8 191 aaKnown RBP20.03■□□□□ 0.8
SCN8A-206ENST00000550891 LRRC7Q96NW7 1537 aa20.03■□□□□ 0.8
SCN8A-206ENST00000550891 FANCIQ9NVI1 1328 aa20.03■□□□□ 0.8
SCN8A-206ENST00000550891 CT47B1P0C2W7 299 aaPredicted RBP20.03■□□□□ 0.8
SCN8A-206ENST00000550891 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
SCN8A-206ENST00000550891 LMOD3Q0VAK6 560 aa20.03■□□□□ 0.8
SCN8A-206ENST00000550891 PHF8Q9UPP1 1060 aa20.02■□□□□ 0.8
SCN8A-206ENST00000550891 AMPHP49418 695 aa20.02■□□□□ 0.8
SCN8A-206ENST00000550891 PDE3AQ14432 1141 aa20.02■□□□□ 0.8
SCN8A-206ENST00000550891 LAS1LQ9Y4W2 734 aaKnown RBP20.02■□□□□ 0.8
SCN8A-206ENST00000550891 ABTB2Q8N961 1025 aa20.01■□□□□ 0.79
SCN8A-206ENST00000550891 BCL2L13Q9BXK5 485 aa20.01■□□□□ 0.79
SCN8A-206ENST00000550891 NRKQ7Z2Y5 1582 aa20■□□□□ 0.79
SCN8A-206ENST00000550891 PHACTR3Q96KR7 559 aa20■□□□□ 0.79
SCN8A-206ENST00000550891 EIF4A2Q14240 407 aaKnown RBP20■□□□□ 0.79
SCN8A-206ENST00000550891 EXOSC9Q06265 439 aaKnown RBP20■□□□□ 0.79
SCN8A-206ENST00000550891 ESCO1Q5FWF5 840 aa20■□□□□ 0.79
SCN8A-206ENST00000550891 SSH2Q76I76 1423 aa19.99■□□□□ 0.79
SCN8A-206ENST00000550891 USP31Q70CQ4 1352 aa19.99■□□□□ 0.79
SCN8A-206ENST00000550891 SULT6B1Q6IMI4 303 aa19.99■□□□□ 0.79
SCN8A-206ENST00000550891 HSP90AB2PQ58FF8 381 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms