RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 TRPM3Q9HCF6 1732 aaPredicted RBP16.93■□□□□ 0.3
ERBB3-216ENST00000550869 C11orf95C9JLR9 678 aaPredicted RBP16.92■□□□□ 0.3
ERBB3-216ENST00000550869 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
ERBB3-216ENST00000550869 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
ERBB3-216ENST00000550869 TULP4Q9NRJ4 1543 aa16.91■□□□□ 0.3
ERBB3-216ENST00000550869 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
ERBB3-216ENST00000550869 ALS2Q96Q42 1657 aa16.91■□□□□ 0.3
ERBB3-216ENST00000550869 ITSN1Q15811 1721 aa16.9■□□□□ 0.3
ERBB3-216ENST00000550869 VPS72Q15906 364 aa16.9■□□□□ 0.3
ERBB3-216ENST00000550869 BRWD3Q6RI45 1802 aa16.9■□□□□ 0.3
ERBB3-216ENST00000550869 BLMP54132 1417 aaPredicted RBP16.88■□□□□ 0.29
ERBB3-216ENST00000550869 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
ERBB3-216ENST00000550869 ZRANB1Q9UGI0 708 aa16.88■□□□□ 0.29
ERBB3-216ENST00000550869 WASHC2AQ641Q2 1341 aa16.88■□□□□ 0.29
ERBB3-216ENST00000550869 LMOD2Q6P5Q4 547 aa16.87■□□□□ 0.29
ERBB3-216ENST00000550869 PMFBP1Q8TBY8 1022 aa16.87■□□□□ 0.29
ERBB3-216ENST00000550869 CCDC7Q96M83 1385 aa16.87■□□□□ 0.29
ERBB3-216ENST00000550869 NRAPQ86VF7 1730 aa16.87■□□□□ 0.29
ERBB3-216ENST00000550869 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
ERBB3-216ENST00000550869 ONECUT3O60422 494 aaPredicted RBP16.86■□□□□ 0.29
ERBB3-216ENST00000550869 TMF1P82094 1093 aa16.86■□□□□ 0.29
ERBB3-216ENST00000550869 CABLES1Q8TDN4 633 aa16.86■□□□□ 0.29
ERBB3-216ENST00000550869 PUS7Q96PZ0 661 aaKnown RBP16.86■□□□□ 0.29
ERBB3-216ENST00000550869 KIF7Q2M1P5 1343 aa16.86■□□□□ 0.29
ERBB3-216ENST00000550869 WASLO00401 505 aaPredicted RBP16.85■□□□□ 0.29
ERBB3-216ENST00000550869 CRYBG1Q9Y4K1 1723 aa16.84■□□□□ 0.29
ERBB3-216ENST00000550869 SEPT12Q8IYM1 358 aa16.84■□□□□ 0.29
ERBB3-216ENST00000550869 MINK1Q8N4C8 1332 aaPredicted RBP16.84■□□□□ 0.29
ERBB3-216ENST00000550869 PRR36Q9H6K5 1346 aa16.82■□□□□ 0.28
ERBB3-216ENST00000550869 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
ERBB3-216ENST00000550869 ATP7BP35670 1465 aa16.81■□□□□ 0.28
ERBB3-216ENST00000550869 FAM83GA6ND36 823 aa16.81■□□□□ 0.28
ERBB3-216ENST00000550869 SF3B2Q13435 895 aaKnown RBP16.81■□□□□ 0.28
ERBB3-216ENST00000550869 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
ERBB3-216ENST00000550869 KRT27Q7Z3Y8 459 aa16.8■□□□□ 0.28
ERBB3-216ENST00000550869 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
ERBB3-216ENST00000550869 TOPAZ1Q8N9V7 1692 aa16.79■□□□□ 0.28
ERBB3-216ENST00000550869 EVC2Q86UK5 1308 aa16.79■□□□□ 0.28
ERBB3-216ENST00000550869 PLEKHG5O94827 1062 aa16.79■□□□□ 0.28
ERBB3-216ENST00000550869 BTG4Q9NY30 223 aa16.79■□□□□ 0.28
ERBB3-216ENST00000550869 PHRF1Q9P1Y6 1649 aaKnown RBP16.77■□□□□ 0.27
ERBB3-216ENST00000550869 NUDT16Q96DE0 195 aaKnown RBP16.76■□□□□ 0.27
ERBB3-216ENST00000550869 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
ERBB3-216ENST00000550869 PAK3O75914 559 aaPredicted RBP16.75■□□□□ 0.27
ERBB3-216ENST00000550869 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
ERBB3-216ENST00000550869 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
ERBB3-216ENST00000550869 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
ERBB3-216ENST00000550869 A0A0G2JS52 829 aa16.74■□□□□ 0.27
ERBB3-216ENST00000550869 MYT1Q01538 1121 aa16.74■□□□□ 0.27
ERBB3-216ENST00000550869 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
ERBB3-216ENST00000550869 FAM98CQ17RN3 349 aaKnown RBP16.74■□□□□ 0.27
ERBB3-216ENST00000550869 PRDM11Q9NQV5 511 aa16.74■□□□□ 0.27
ERBB3-216ENST00000550869 SPATA31A5Q5VU36 1347 aa16.73■□□□□ 0.27
ERBB3-216ENST00000550869 SPATA31A7Q8IWB4 1347 aa16.73■□□□□ 0.27
ERBB3-216ENST00000550869 CCDC61Q9Y6R9 512 aa16.73■□□□□ 0.27
ERBB3-216ENST00000550869 MYOM1P52179 1685 aa16.72■□□□□ 0.27
ERBB3-216ENST00000550869 DEFB132Q7Z7B7 95 aa16.72■□□□□ 0.27
ERBB3-216ENST00000550869 CABP2Q9NPB3 220 aa16.72■□□□□ 0.27
ERBB3-216ENST00000550869 LRP5O75197 1615 aa16.71■□□□□ 0.27
ERBB3-216ENST00000550869 BAG6P46379 1132 aa16.71■□□□□ 0.27
ERBB3-216ENST00000550869 KIAA0232Q92628 1395 aa16.7■□□□□ 0.26
ERBB3-216ENST00000550869 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
ERBB3-216ENST00000550869 PLEKHG3A1L390 1219 aa16.7■□□□□ 0.26
ERBB3-216ENST00000550869 DISP2A7MBM2 1401 aa16.69■□□□□ 0.26
ERBB3-216ENST00000550869 ACEP12821 1306 aa16.69■□□□□ 0.26
ERBB3-216ENST00000550869 NRKQ7Z2Y5 1582 aa16.68■□□□□ 0.26
ERBB3-216ENST00000550869 TNS1Q9HBL0 1735 aaKnown RBP16.68■□□□□ 0.26
ERBB3-216ENST00000550869 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
ERBB3-216ENST00000550869 PER1O15534 1290 aaPredicted RBP16.68■□□□□ 0.26
ERBB3-216ENST00000550869 SRPK2P78362 688 aaKnown RBP16.68■□□□□ 0.26
ERBB3-216ENST00000550869 SPATA31A1Q5TZJ5 1347 aa16.68■□□□□ 0.26
ERBB3-216ENST00000550869 DIEXFQ68CQ4 756 aaKnown RBP16.67■□□□□ 0.26
ERBB3-216ENST00000550869 POLR3GLQ9BT43 218 aa16.67■□□□□ 0.26
ERBB3-216ENST00000550869 SLC12A5Q9H2X9 1139 aa16.67■□□□□ 0.26
ERBB3-216ENST00000550869 CPDO75976 1380 aa16.66■□□□□ 0.26
ERBB3-216ENST00000550869 PANK3Q9H999 370 aa16.65■□□□□ 0.26
ERBB3-216ENST00000550869 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
ERBB3-216ENST00000550869 PPIP5K1Q6PFW1 1433 aa16.64■□□□□ 0.25
ERBB3-216ENST00000550869 ABTB2Q8N961 1025 aa16.64■□□□□ 0.25
ERBB3-216ENST00000550869 CD163L1Q9NR16 1453 aa16.64■□□□□ 0.25
ERBB3-216ENST00000550869 USP19O94966 1318 aa16.64■□□□□ 0.25
ERBB3-216ENST00000550869 SSH2Q76I76 1423 aa16.63■□□□□ 0.25
ERBB3-216ENST00000550869 ZC3H6P61129 1189 aaKnown RBP16.63■□□□□ 0.25
ERBB3-216ENST00000550869 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
ERBB3-216ENST00000550869 FAM196AQ6ZSG2 479 aa16.63■□□□□ 0.25
ERBB3-216ENST00000550869 BARGINQ6ZT62 677 aa16.63■□□□□ 0.25
ERBB3-216ENST00000550869 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
ERBB3-216ENST00000550869 ANKRD36BQ8N2N9 1353 aa16.63■□□□□ 0.25
ERBB3-216ENST00000550869 NLRP13Q86W25 1043 aa16.62■□□□□ 0.25
ERBB3-216ENST00000550869 STRN4Q9NRL3 753 aa16.62■□□□□ 0.25
ERBB3-216ENST00000550869 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
ERBB3-216ENST00000550869 PARD3Q8TEW0 1356 aa16.62■□□□□ 0.25
ERBB3-216ENST00000550869 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
ERBB3-216ENST00000550869 EVA1CP58658 441 aa16.61■□□□□ 0.25
ERBB3-216ENST00000550869 NUTM2GQ5VZR2 741 aa16.61■□□□□ 0.25
ERBB3-216ENST00000550869 CARD14Q9BXL6 1004 aa16.61■□□□□ 0.25
ERBB3-216ENST00000550869 EN1Q05925 392 aaPredicted RBP16.6■□□□□ 0.25
ERBB3-216ENST00000550869 TMC1Q8TDI8 760 aa16.6■□□□□ 0.25
ERBB3-216ENST00000550869 THRAP3Q9Y2W1 955 aaKnown RBP16.6■□□□□ 0.25
ERBB3-216ENST00000550869 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms