RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 KIF20BQ96Q89 1820 aa12.34□□□□□ -0.43
CACNB3-215ENST00000550190 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
CACNB3-215ENST00000550190 TRPM3Q9HCF6 1732 aaPredicted RBP12.33□□□□□ -0.44
CACNB3-215ENST00000550190 NRKQ7Z2Y5 1582 aa12.32□□□□□ -0.44
CACNB3-215ENST00000550190 EDC4Q6P2E9 1401 aaKnown RBP12.32□□□□□ -0.44
CACNB3-215ENST00000550190 NUTM2GQ5VZR2 741 aa12.32□□□□□ -0.44
CACNB3-215ENST00000550190 ABTB2Q8N961 1025 aa12.32□□□□□ -0.44
CACNB3-215ENST00000550190 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
CACNB3-215ENST00000550190 PXDNQ92626 1479 aa12.32□□□□□ -0.44
CACNB3-215ENST00000550190 PER1O15534 1290 aaPredicted RBP12.31□□□□□ -0.44
CACNB3-215ENST00000550190 NME9Q86XW9 330 aa12.31□□□□□ -0.44
CACNB3-215ENST00000550190 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
CACNB3-215ENST00000550190 CGNL1Q0VF96 1302 aa12.31□□□□□ -0.44
CACNB3-215ENST00000550190 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
CACNB3-215ENST00000550190 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
CACNB3-215ENST00000550190 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
CACNB3-215ENST00000550190 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
CACNB3-215ENST00000550190 BRD4O60885 1362 aaPredicted RBP12.3□□□□□ -0.44
CACNB3-215ENST00000550190 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
CACNB3-215ENST00000550190 ALS2Q96Q42 1657 aa12.29□□□□□ -0.44
CACNB3-215ENST00000550190 HSPA1LP34931 641 aa12.29□□□□□ -0.44
CACNB3-215ENST00000550190 NLRP6P59044 892 aa12.29□□□□□ -0.44
CACNB3-215ENST00000550190 LRRC59Q96AG4 307 aaKnown RBP12.29□□□□□ -0.44
CACNB3-215ENST00000550190 SPATA31A3Q5VYP0 1347 aa12.29□□□□□ -0.44
CACNB3-215ENST00000550190 COL16A1Q07092 1604 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-215ENST00000550190 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
CACNB3-215ENST00000550190 PIK3C2AO00443 1686 aa12.29□□□□□ -0.44
CACNB3-215ENST00000550190 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
CACNB3-215ENST00000550190 FYB1O15117 783 aa12.28□□□□□ -0.44
CACNB3-215ENST00000550190 POTEDQ86YR6 584 aa12.28□□□□□ -0.44
CACNB3-215ENST00000550190 FBXO41Q8TF61 875 aa12.28□□□□□ -0.44
CACNB3-215ENST00000550190 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
CACNB3-215ENST00000550190 DIEXFQ68CQ4 756 aaKnown RBP12.27□□□□□ -0.45
CACNB3-215ENST00000550190 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
CACNB3-215ENST00000550190 COG3Q96JB2 828 aa12.27□□□□□ -0.45
CACNB3-215ENST00000550190 SOX12O15370 315 aa12.26□□□□□ -0.45
CACNB3-215ENST00000550190 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
CACNB3-215ENST00000550190 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
CACNB3-215ENST00000550190 MORC1Q86VD1 984 aa12.26□□□□□ -0.45
CACNB3-215ENST00000550190 ARHGEF10O15013 1369 aa12.26□□□□□ -0.45
CACNB3-215ENST00000550190 TNNT2P45379 298 aaPredicted RBP12.25□□□□□ -0.45
CACNB3-215ENST00000550190 CABLES1Q8TDN4 633 aa12.25□□□□□ -0.45
CACNB3-215ENST00000550190 MARF1Q9Y4F3 1742 aaKnown RBP12.25□□□□□ -0.45
CACNB3-215ENST00000550190 ZBTB7CA1YPR0 619 aa12.24□□□□□ -0.45
CACNB3-215ENST00000550190 NSD2O96028 1365 aa12.24□□□□□ -0.45
CACNB3-215ENST00000550190 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
CACNB3-215ENST00000550190 USP31Q70CQ4 1352 aa12.23□□□□□ -0.45
CACNB3-215ENST00000550190 ANP32CO43423 234 aa12.23□□□□□ -0.45
CACNB3-215ENST00000550190 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
CACNB3-215ENST00000550190 PNPLA6Q8IY17 1366 aa12.22□□□□□ -0.45
CACNB3-215ENST00000550190 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
CACNB3-215ENST00000550190 NUTM2BA6NNL0 878 aaPredicted RBP12.22□□□□□ -0.45
CACNB3-215ENST00000550190 NUTM2EB1AL46 878 aaPredicted RBP12.22□□□□□ -0.45
CACNB3-215ENST00000550190 FBLN1P23142 703 aa12.22□□□□□ -0.45
CACNB3-215ENST00000550190 NUTM2AQ8IVF1 878 aaPredicted RBP12.22□□□□□ -0.45
CACNB3-215ENST00000550190 SHPRHQ149N8 1683 aa12.22□□□□□ -0.45
CACNB3-215ENST00000550190 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
CACNB3-215ENST00000550190 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
CACNB3-215ENST00000550190 OVOS2A0A0J9YW53 1432 aa12.21□□□□□ -0.45
CACNB3-215ENST00000550190 OVOS2Q6IE36 1432 aa12.21□□□□□ -0.45
CACNB3-215ENST00000550190 JCADQ9P266 1359 aa12.21□□□□□ -0.45
CACNB3-215ENST00000550190 ABCA3Q99758 1704 aa12.21□□□□□ -0.45
CACNB3-215ENST00000550190 CRYBG1Q9Y4K1 1723 aa12.21□□□□□ -0.45
CACNB3-215ENST00000550190 COL22A1Q8NFW1 1626 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-215ENST00000550190 GCP02774 474 aa12.2□□□□□ -0.46
CACNB3-215ENST00000550190 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
CACNB3-215ENST00000550190 KCNH5Q8NCM2 988 aa12.2□□□□□ -0.46
CACNB3-215ENST00000550190 PRKRIP1Q9H875 184 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-215ENST00000550190 LTN1O94822 1766 aa12.2□□□□□ -0.46
CACNB3-215ENST00000550190 USP19O94966 1318 aa12.19□□□□□ -0.46
CACNB3-215ENST00000550190 RALBP1Q15311 655 aa12.19□□□□□ -0.46
CACNB3-215ENST00000550190 SLIT3O75094 1523 aa12.19□□□□□ -0.46
CACNB3-215ENST00000550190 PPM1GO15355 546 aaPredicted RBP12.18□□□□□ -0.46
CACNB3-215ENST00000550190 ADAMTS2O95450 1211 aa12.18□□□□□ -0.46
CACNB3-215ENST00000550190 RRS1Q15050 365 aaKnown RBP12.18□□□□□ -0.46
CACNB3-215ENST00000550190 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
CACNB3-215ENST00000550190 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
CACNB3-215ENST00000550190 RGPD5Q99666 1765 aa12.16□□□□□ -0.46
CACNB3-215ENST00000550190 AMPHP49418 695 aa12.16□□□□□ -0.46
CACNB3-215ENST00000550190 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
CACNB3-215ENST00000550190 NFAT5O94916 1531 aa12.16□□□□□ -0.46
CACNB3-215ENST00000550190 SPATA31A6Q5VVP1 1343 aa12.15□□□□□ -0.46
CACNB3-215ENST00000550190 MYBBP1AQ9BQG0 1328 aaKnown RBP12.15□□□□□ -0.46
CACNB3-215ENST00000550190 MTHFSP49914 203 aa12.15□□□□□ -0.46
CACNB3-215ENST00000550190 CHRNA2Q15822 529 aa12.15□□□□□ -0.46
CACNB3-215ENST00000550190 MEX3CQ5U5Q3 659 aaKnown RBP12.15□□□□□ -0.46
CACNB3-215ENST00000550190 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
CACNB3-215ENST00000550190 POLKQ9UBT6 870 aa12.15□□□□□ -0.46
CACNB3-215ENST00000550190 KIAA0232Q92628 1395 aa12.15□□□□□ -0.46
CACNB3-215ENST00000550190 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
CACNB3-215ENST00000550190 ILDR1Q86SU0 546 aaPredicted RBP12.14□□□□□ -0.47
CACNB3-215ENST00000550190 ARHGEF25Q86VW2 580 aa12.14□□□□□ -0.47
CACNB3-215ENST00000550190 AATKQ6ZMQ8 1374 aa12.14□□□□□ -0.47
CACNB3-215ENST00000550190 MIER1Q8N108 512 aa12.13□□□□□ -0.47
CACNB3-215ENST00000550190 PEAK1Q9H792 1746 aa12.13□□□□□ -0.47
CACNB3-215ENST00000550190 LTV1Q96GA3 475 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-215ENST00000550190 COL14A1Q05707 1796 aaKnown RBP12.12□□□□□ -0.47
CACNB3-215ENST00000550190 LRP6O75581 1613 aa12.11□□□□□ -0.47
CACNB3-215ENST00000550190 COL18A1P39060 1754 aa12.11□□□□□ -0.47
CACNB3-215ENST00000550190 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms