RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 KCNA6P17658 529 aa16.88■□□□□ 0.29
CACNB3-214ENST00000550168 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
CACNB3-214ENST00000550168 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
CACNB3-214ENST00000550168 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
CACNB3-214ENST00000550168 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
CACNB3-214ENST00000550168 NKTRP30414 1462 aaKnown RBP16.87■□□□□ 0.29
CACNB3-214ENST00000550168 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
CACNB3-214ENST00000550168 TOPAZ1Q8N9V7 1692 aa16.87■□□□□ 0.29
CACNB3-214ENST00000550168 PLEKHG3A1L390 1219 aa16.86■□□□□ 0.29
CACNB3-214ENST00000550168 ITSN1Q15811 1721 aa16.86■□□□□ 0.29
CACNB3-214ENST00000550168 ZBED9Q6R2W3 1325 aa16.86■□□□□ 0.29
CACNB3-214ENST00000550168 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
CACNB3-214ENST00000550168 SPATA31A6Q5VVP1 1343 aa16.85■□□□□ 0.29
CACNB3-214ENST00000550168 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
CACNB3-214ENST00000550168 NCOA3Q9Y6Q9 1424 aa16.84■□□□□ 0.29
CACNB3-214ENST00000550168 ADGRL3Q9HAR2 1447 aa16.83■□□□□ 0.28
CACNB3-214ENST00000550168 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
CACNB3-214ENST00000550168 CFAP53Q96M91 514 aa16.82■□□□□ 0.28
CACNB3-214ENST00000550168 WDR43Q15061 677 aaKnown RBP eCLIP16.81■□□□□ 0.28
CACNB3-214ENST00000550168 AKAP12Q02952 1782 aa16.81■□□□□ 0.28
CACNB3-214ENST00000550168 BLMP54132 1417 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-214ENST00000550168 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
CACNB3-214ENST00000550168 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
CACNB3-214ENST00000550168 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
CACNB3-214ENST00000550168 FMN2Q9NZ56 1722 aa16.8■□□□□ 0.28
CACNB3-214ENST00000550168 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
CACNB3-214ENST00000550168 FYB1O15117 783 aa16.79■□□□□ 0.28
CACNB3-214ENST00000550168 XIRP1Q702N8 1843 aaKnown RBP16.79■□□□□ 0.28
CACNB3-214ENST00000550168 SLC34A2O95436 690 aa16.78■□□□□ 0.28
CACNB3-214ENST00000550168 RBM6P78332 1123 aaKnown RBP16.78■□□□□ 0.28
CACNB3-214ENST00000550168 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
CACNB3-214ENST00000550168 EP400Q96L91 3159 aa16.78■□□□□ 0.28
CACNB3-214ENST00000550168 TTC21AQ8NDW8 1320 aa16.77■□□□□ 0.28
CACNB3-214ENST00000550168 USP6P35125 1406 aa16.77■□□□□ 0.27
CACNB3-214ENST00000550168 NHSL1Q5SYE7 1610 aa16.77■□□□□ 0.27
CACNB3-214ENST00000550168 NRKQ7Z2Y5 1582 aa16.76■□□□□ 0.27
CACNB3-214ENST00000550168 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
CACNB3-214ENST00000550168 AATKQ6ZMQ8 1374 aa16.76■□□□□ 0.27
CACNB3-214ENST00000550168 DCCP43146 1447 aa16.75■□□□□ 0.27
CACNB3-214ENST00000550168 CEP350Q5VT06 3117 aa16.75■□□□□ 0.27
CACNB3-214ENST00000550168 ACEP12821 1306 aa16.74■□□□□ 0.27
CACNB3-214ENST00000550168 PDE3BQ13370 1112 aa16.74■□□□□ 0.27
CACNB3-214ENST00000550168 AFF2P51816 1311 aa16.73■□□□□ 0.27
CACNB3-214ENST00000550168 COG3Q96JB2 828 aa16.73■□□□□ 0.27
CACNB3-214ENST00000550168 GGNBP2Q9H3C7 697 aa16.73■□□□□ 0.27
CACNB3-214ENST00000550168 SSH2Q76I76 1423 aa16.72■□□□□ 0.27
CACNB3-214ENST00000550168 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
CACNB3-214ENST00000550168 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
CACNB3-214ENST00000550168 SMG6Q86US8 1419 aaKnown RBP16.71■□□□□ 0.27
CACNB3-214ENST00000550168 MTHFSP49914 203 aa16.71■□□□□ 0.27
CACNB3-214ENST00000550168 PROSER2Q86WR7 435 aaPredicted RBP16.71■□□□□ 0.27
CACNB3-214ENST00000550168 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
CACNB3-214ENST00000550168 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
CACNB3-214ENST00000550168 C14orf37Q86TY3 774 aa16.7■□□□□ 0.26
CACNB3-214ENST00000550168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNB3-214ENST00000550168 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
CACNB3-214ENST00000550168 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
CACNB3-214ENST00000550168 USP31Q70CQ4 1352 aa16.69■□□□□ 0.26
CACNB3-214ENST00000550168 PNPLA6Q8IY17 1366 aa16.69■□□□□ 0.26
CACNB3-214ENST00000550168 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
CACNB3-214ENST00000550168 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
CACNB3-214ENST00000550168 COL16A1Q07092 1604 aaPredicted RBP16.68■□□□□ 0.26
CACNB3-214ENST00000550168 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
CACNB3-214ENST00000550168 PCDH10Q9P2E7 1040 aa16.68■□□□□ 0.26
CACNB3-214ENST00000550168 PHF8Q9UPP1 1060 aa16.68■□□□□ 0.26
CACNB3-214ENST00000550168 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
CACNB3-214ENST00000550168 OVOS2Q6IE36 1432 aa16.68■□□□□ 0.26
CACNB3-214ENST00000550168 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
CACNB3-214ENST00000550168 NGLY1Q96IV0 654 aa16.67■□□□□ 0.26
CACNB3-214ENST00000550168 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
CACNB3-214ENST00000550168 NME9Q86XW9 330 aa16.66■□□□□ 0.26
CACNB3-214ENST00000550168 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
CACNB3-214ENST00000550168 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
CACNB3-214ENST00000550168 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-214ENST00000550168 NUTM2FA1L443 756 aa16.64■□□□□ 0.25
CACNB3-214ENST00000550168 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
CACNB3-214ENST00000550168 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
CACNB3-214ENST00000550168 CADPS2Q86UW7 1296 aa16.63■□□□□ 0.25
CACNB3-214ENST00000550168 PMFBP1Q8TBY8 1022 aa16.63■□□□□ 0.25
CACNB3-214ENST00000550168 MSH6P52701 1360 aa16.63■□□□□ 0.25
CACNB3-214ENST00000550168 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
CACNB3-214ENST00000550168 ATF3P18847 181 aa16.62■□□□□ 0.25
CACNB3-214ENST00000550168 ZNF784Q8NCA9 323 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-214ENST00000550168 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
CACNB3-214ENST00000550168 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
CACNB3-214ENST00000550168 RGPD8O14715 1765 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-214ENST00000550168 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
CACNB3-214ENST00000550168 NEFLP07196 543 aa16.6■□□□□ 0.25
CACNB3-214ENST00000550168 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
CACNB3-214ENST00000550168 PSDA5PKW4 1024 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-214ENST00000550168 ESCO1Q5FWF5 840 aa16.59■□□□□ 0.25
CACNB3-214ENST00000550168 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-214ENST00000550168 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
CACNB3-214ENST00000550168 MST1RQ04912 1400 aa16.58■□□□□ 0.24
CACNB3-214ENST00000550168 PIK3C2AO00443 1686 aa16.57■□□□□ 0.24
CACNB3-214ENST00000550168 NEFMP07197 916 aa16.57■□□□□ 0.24
CACNB3-214ENST00000550168 PSME1Q06323 249 aa16.57■□□□□ 0.24
CACNB3-214ENST00000550168 SLAIN2Q9P270 581 aa16.57■□□□□ 0.24
CACNB3-214ENST00000550168 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
CACNB3-214ENST00000550168 FCHSD2O94868 740 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms