RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 TPD52L1Q16890 204 aaPredicted RBP13.59□□□□□ -0.23
RPH3A-217ENST00000549913 SULT6B1Q6IMI4 303 aa13.59□□□□□ -0.23
RPH3A-217ENST00000549913 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
RPH3A-217ENST00000549913 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
RPH3A-217ENST00000549913 BICRAQ9NZM4 1560 aa13.59□□□□□ -0.23
RPH3A-217ENST00000549913 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
RPH3A-217ENST00000549913 CAMSAP2Q08AD1 1489 aa13.59□□□□□ -0.23
RPH3A-217ENST00000549913 ATF3P18847 181 aa13.58□□□□□ -0.24
RPH3A-217ENST00000549913 CCAR2Q8N163 923 aaKnown RBP13.58□□□□□ -0.24
RPH3A-217ENST00000549913 GPRASP1Q5JY77 1395 aa13.58□□□□□ -0.24
RPH3A-217ENST00000549913 TPM2P07951 284 aa13.58□□□□□ -0.24
RPH3A-217ENST00000549913 MAP7D2Q96T17 732 aa13.58□□□□□ -0.24
RPH3A-217ENST00000549913 MCM4P33991 863 aa13.58□□□□□ -0.24
RPH3A-217ENST00000549913 ZNF771Q7L3S4 317 aaPredicted RBP13.58□□□□□ -0.24
RPH3A-217ENST00000549913 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
RPH3A-217ENST00000549913 GNAI2P04899 355 aa13.57□□□□□ -0.24
RPH3A-217ENST00000549913 TPM1P09493 284 aa13.57□□□□□ -0.24
RPH3A-217ENST00000549913 MTERF4Q7Z6M4 381 aaKnown RBP13.57□□□□□ -0.24
RPH3A-217ENST00000549913 ANO8Q9HCE9 1232 aaPredicted RBP13.57□□□□□ -0.24
RPH3A-217ENST00000549913 CWC22Q9HCG8 908 aaKnown RBP13.57□□□□□ -0.24
RPH3A-217ENST00000549913 LETM1O95202 739 aaPredicted RBP13.57□□□□□ -0.24
RPH3A-217ENST00000549913 NCOA1Q15788 1441 aa13.57□□□□□ -0.24
RPH3A-217ENST00000549913 WWC1Q8IX03 1113 aa13.57□□□□□ -0.24
RPH3A-217ENST00000549913 NEUROD6Q96NK8 337 aa13.57□□□□□ -0.24
RPH3A-217ENST00000549913 PES1O00541 588 aaKnown RBP13.57□□□□□ -0.24
RPH3A-217ENST00000549913 TSR1Q2NL82 804 aaKnown RBP13.57□□□□□ -0.24
RPH3A-217ENST00000549913 GRPEL1Q9HAV7 217 aa13.57□□□□□ -0.24
RPH3A-217ENST00000549913 IFT57Q9NWB7 429 aa13.57□□□□□ -0.24
RPH3A-217ENST00000549913 CCDC73Q6ZRK6 1079 aa13.57□□□□□ -0.24
RPH3A-217ENST00000549913 ZNF428Q96B54 188 aa13.57□□□□□ -0.24
RPH3A-217ENST00000549913 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
RPH3A-217ENST00000549913 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
RPH3A-217ENST00000549913 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
RPH3A-217ENST00000549913 SYTL4Q96C24 671 aaPredicted RBP13.56□□□□□ -0.24
RPH3A-217ENST00000549913 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
RPH3A-217ENST00000549913 LAMC3Q9Y6N6 1575 aa13.56□□□□□ -0.24
RPH3A-217ENST00000549913 HOMER1Q86YM7 354 aa13.56□□□□□ -0.24
RPH3A-217ENST00000549913 CIZ1Q9ULV3 898 aaPredicted RBP13.56□□□□□ -0.24
RPH3A-217ENST00000549913 GPS2Q13227 327 aa13.56□□□□□ -0.24
RPH3A-217ENST00000549913 TSPY26PQ9H489 355 aa13.56□□□□□ -0.24
RPH3A-217ENST00000549913 RAPGEF3O95398 923 aa13.55□□□□□ -0.24
RPH3A-217ENST00000549913 PSMA5P28066 241 aa13.55□□□□□ -0.24
RPH3A-217ENST00000549913 NSD3Q9BZ95 1437 aa13.55□□□□□ -0.24
RPH3A-217ENST00000549913 FCHSD2O94868 740 aa13.55□□□□□ -0.24
RPH3A-217ENST00000549913 FSD1Q9BTV5 496 aa13.55□□□□□ -0.24
RPH3A-217ENST00000549913 A0A0U1RQG5 324 aaPredicted RBP13.55□□□□□ -0.24
RPH3A-217ENST00000549913 CCT4P50991 539 aaKnown RBP13.55□□□□□ -0.24
RPH3A-217ENST00000549913 C20orf194Q5TEA3 1177 aa13.55□□□□□ -0.24
RPH3A-217ENST00000549913 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
RPH3A-217ENST00000549913 HDGFL1Q5TGJ6 251 aa13.55□□□□□ -0.24
RPH3A-217ENST00000549913 PLB1Q6P1J6 1458 aa13.54□□□□□ -0.24
RPH3A-217ENST00000549913 AMOTL1Q8IY63 956 aa13.54□□□□□ -0.24
RPH3A-217ENST00000549913 NOL10Q9BSC4 688 aaKnown RBP13.54□□□□□ -0.24
RPH3A-217ENST00000549913 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.53□□□□□ -0.24
RPH3A-217ENST00000549913 NFXL1Q6ZNB6 911 aa13.53□□□□□ -0.24
RPH3A-217ENST00000549913 VPS37DQ86XT2 251 aa13.53□□□□□ -0.24
RPH3A-217ENST00000549913 RPRD2Q5VT52 1461 aaKnown RBP13.53□□□□□ -0.24
RPH3A-217ENST00000549913 HOOK1Q9UJC3 728 aaKnown RBP13.53□□□□□ -0.24
RPH3A-217ENST00000549913 WASHC4Q2M389 1173 aa13.53□□□□□ -0.24
RPH3A-217ENST00000549913 PEG3Q9GZU2 1588 aa13.52□□□□□ -0.24
RPH3A-217ENST00000549913 TMPOP42166 694 aaKnown RBP13.52□□□□□ -0.24
RPH3A-217ENST00000549913 ESCO1Q5FWF5 840 aa13.52□□□□□ -0.24
RPH3A-217ENST00000549913 CCDC27Q2M243 656 aa13.52□□□□□ -0.24
RPH3A-217ENST00000549913 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.24
RPH3A-217ENST00000549913 THEMISQ8N1K5 641 aaPredicted RBP13.52□□□□□ -0.24
RPH3A-217ENST00000549913 ERICH2A1L162 156 aa13.52□□□□□ -0.25
RPH3A-217ENST00000549913 HIP1O00291 1037 aa13.52□□□□□ -0.25
RPH3A-217ENST00000549913 VPS53Q5VIR6 699 aa13.52□□□□□ -0.25
RPH3A-217ENST00000549913 SKAP1Q86WV1 359 aa13.52□□□□□ -0.25
RPH3A-217ENST00000549913 SAFBQ15424 915 aaKnown RBP eCLIP13.51□□□□□ -0.25
RPH3A-217ENST00000549913 PDCP20941 246 aa13.51□□□□□ -0.25
RPH3A-217ENST00000549913 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
RPH3A-217ENST00000549913 NFE2L2Q16236 605 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 TEX35Q5T0J7 233 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 ANKRD20A12PQ8NF67 263 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 NAT10Q9H0A0 1025 aaKnown RBP13.5□□□□□ -0.25
RPH3A-217ENST00000549913 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
RPH3A-217ENST00000549913 LRRCC1Q9C099 1032 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 SRCIN1Q9C0H9 1055 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 FOSBP53539 338 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 GRIN2AQ12879 1464 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 ESPNB1AK53 854 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 TRIM5Q9C035 493 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 KIF14Q15058 1648 aa13.5□□□□□ -0.25
RPH3A-217ENST00000549913 CCDC47Q96A33 483 aaKnown RBP13.49□□□□□ -0.25
RPH3A-217ENST00000549913 SDF4Q9BRK5 362 aa13.49□□□□□ -0.25
RPH3A-217ENST00000549913 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
RPH3A-217ENST00000549913 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
RPH3A-217ENST00000549913 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
RPH3A-217ENST00000549913 FIBPO43427 364 aa13.49□□□□□ -0.25
RPH3A-217ENST00000549913 IPO7O95373 1038 aaKnown RBP13.48□□□□□ -0.25
RPH3A-217ENST00000549913 RRS1Q15050 365 aaKnown RBP13.48□□□□□ -0.25
RPH3A-217ENST00000549913 TMEM57Q8N5G2 664 aa13.48□□□□□ -0.25
RPH3A-217ENST00000549913 NKTRP30414 1462 aaKnown RBP13.48□□□□□ -0.25
RPH3A-217ENST00000549913 RPAP2Q8IXW5 612 aaPredicted RBP13.48□□□□□ -0.25
RPH3A-217ENST00000549913 ARGLU1Q9NWB6 273 aaPredicted RBP13.48□□□□□ -0.25
RPH3A-217ENST00000549913 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
RPH3A-217ENST00000549913 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
RPH3A-217ENST00000549913 MNS1Q8NEH6 495 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms