RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 NWD2Q9ULI1 1742 aa10.28□□□□□ -0.76
PTCH1-219ENST00000549678 PLEKHG5O94827 1062 aa10.28□□□□□ -0.76
PTCH1-219ENST00000549678 CDK19Q9BWU1 502 aa10.28□□□□□ -0.76
PTCH1-219ENST00000549678 NUDT16Q96DE0 195 aaKnown RBP10.27□□□□□ -0.77
PTCH1-219ENST00000549678 CCDC61Q9Y6R9 512 aa10.27□□□□□ -0.77
PTCH1-219ENST00000549678 ATP7BP35670 1465 aa10.27□□□□□ -0.77
PTCH1-219ENST00000549678 EVC2Q86UK5 1308 aa10.27□□□□□ -0.77
PTCH1-219ENST00000549678 TRPM3Q9HCF6 1732 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-219ENST00000549678 ONECUT3O60422 494 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-219ENST00000549678 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-219ENST00000549678 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
PTCH1-219ENST00000549678 TOPAZ1Q8N9V7 1692 aa10.25□□□□□ -0.77
PTCH1-219ENST00000549678 ALS2Q96Q42 1657 aa10.25□□□□□ -0.77
PTCH1-219ENST00000549678 ABCA3Q99758 1704 aa10.25□□□□□ -0.77
PTCH1-219ENST00000549678 PLEKHG3A1L390 1219 aa10.25□□□□□ -0.77
PTCH1-219ENST00000549678 CABP2Q9NPB3 220 aa10.25□□□□□ -0.77
PTCH1-219ENST00000549678 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
PTCH1-219ENST00000549678 GLI3P10071 1580 aa10.25□□□□□ -0.77
PTCH1-219ENST00000549678 POLR3AO14802 1390 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-219ENST00000549678 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
PTCH1-219ENST00000549678 BRD4O60885 1362 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-219ENST00000549678 PPIP5K1Q6PFW1 1433 aa10.24□□□□□ -0.77
PTCH1-219ENST00000549678 PLCH1Q4KWH8 1693 aa10.23□□□□□ -0.77
PTCH1-219ENST00000549678 CCDC9Q9Y3X0 531 aaKnown RBP10.23□□□□□ -0.77
PTCH1-219ENST00000549678 COL14A1Q05707 1796 aaKnown RBP10.23□□□□□ -0.77
PTCH1-219ENST00000549678 BLMP54132 1417 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-219ENST00000549678 SEPT12Q8IYM1 358 aa10.22□□□□□ -0.77
PTCH1-219ENST00000549678 BTG4Q9NY30 223 aa10.22□□□□□ -0.77
PTCH1-219ENST00000549678 PRDM11Q9NQV5 511 aa10.21□□□□□ -0.77
PTCH1-219ENST00000549678 ACEP12821 1306 aa10.21□□□□□ -0.78
PTCH1-219ENST00000549678 USP47Q96K76 1375 aa10.21□□□□□ -0.78
PTCH1-219ENST00000549678 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
PTCH1-219ENST00000549678 SF3B2Q13435 895 aaKnown RBP10.2□□□□□ -0.78
PTCH1-219ENST00000549678 SPATA31A5Q5VU36 1347 aa10.2□□□□□ -0.78
PTCH1-219ENST00000549678 KRT27Q7Z3Y8 459 aa10.2□□□□□ -0.78
PTCH1-219ENST00000549678 NRAPQ86VF7 1730 aa10.2□□□□□ -0.78
PTCH1-219ENST00000549678 SPATA31A7Q8IWB4 1347 aa10.2□□□□□ -0.78
PTCH1-219ENST00000549678 TMC1Q8TDI8 760 aa10.2□□□□□ -0.78
PTCH1-219ENST00000549678 ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
PTCH1-219ENST00000549678 CRYBG1Q9Y4K1 1723 aa10.19□□□□□ -0.78
PTCH1-219ENST00000549678 SBNO2Q9Y2G9 1366 aa10.19□□□□□ -0.78
PTCH1-219ENST00000549678 ST20-MTHFSA0A0A6YYL1 179 aa10.19□□□□□ -0.78
PTCH1-219ENST00000549678 AKAP12Q02952 1782 aa10.19□□□□□ -0.78
PTCH1-219ENST00000549678 CPDO75976 1380 aa10.18□□□□□ -0.78
PTCH1-219ENST00000549678 KIAA0232Q92628 1395 aa10.18□□□□□ -0.78
PTCH1-219ENST00000549678 NLRP13Q86W25 1043 aa10.18□□□□□ -0.78
PTCH1-219ENST00000549678 ABTB2Q8N961 1025 aa10.18□□□□□ -0.78
PTCH1-219ENST00000549678 CABP1Q9NZU7 370 aa10.18□□□□□ -0.78
PTCH1-219ENST00000549678 BRWD3Q6RI45 1802 aa10.17□□□□□ -0.78
PTCH1-219ENST00000549678 USP19O94966 1318 aa10.17□□□□□ -0.78
PTCH1-219ENST00000549678 A0A0G2JS52 829 aa10.17□□□□□ -0.78
PTCH1-219ENST00000549678 TMF1P82094 1093 aa10.17□□□□□ -0.78
PTCH1-219ENST00000549678 MYT1Q01538 1121 aa10.17□□□□□ -0.78
PTCH1-219ENST00000549678 FAM98CQ17RN3 349 aaKnown RBP10.17□□□□□ -0.78
PTCH1-219ENST00000549678 NUTM2GQ5VZR2 741 aa10.17□□□□□ -0.78
PTCH1-219ENST00000549678 POLR3GLQ9BT43 218 aa10.17□□□□□ -0.78
PTCH1-219ENST00000549678 PHRF1Q9P1Y6 1649 aaKnown RBP10.17□□□□□ -0.78
PTCH1-219ENST00000549678 SPATA31A1Q5TZJ5 1347 aa10.16□□□□□ -0.78
PTCH1-219ENST00000549678 HDGFL2Q7Z4V5 671 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-219ENST00000549678 ZBTB7CA1YPR0 619 aa10.15□□□□□ -0.78
PTCH1-219ENST00000549678 BAG6P46379 1132 aa10.15□□□□□ -0.78
PTCH1-219ENST00000549678 CDCA8Q53HL2 280 aa10.15□□□□□ -0.78
PTCH1-219ENST00000549678 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-219ENST00000549678 MON2Q7Z3U7 1717 aa10.15□□□□□ -0.78
PTCH1-219ENST00000549678 USP6P35125 1406 aa10.15□□□□□ -0.79
PTCH1-219ENST00000549678 KTN1Q86UP2 1357 aaKnown RBP10.14□□□□□ -0.79
PTCH1-219ENST00000549678 EVA1CP58658 441 aa10.14□□□□□ -0.79
PTCH1-219ENST00000549678 ZC3H6P61129 1189 aaKnown RBP10.14□□□□□ -0.79
PTCH1-219ENST00000549678 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTCH1-219ENST00000549678 BARGINQ6ZT62 677 aa10.14□□□□□ -0.79
PTCH1-219ENST00000549678 TERF2IPQ9NYB0 399 aa10.14□□□□□ -0.79
PTCH1-219ENST00000549678 THSD7AQ9UPZ6 1657 aa10.14□□□□□ -0.79
PTCH1-219ENST00000549678 SSH2Q76I76 1423 aa10.14□□□□□ -0.79
PTCH1-219ENST00000549678 NRKQ7Z2Y5 1582 aa10.14□□□□□ -0.79
PTCH1-219ENST00000549678 C11orf95C9JLR9 678 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-219ENST00000549678 GCP02774 474 aa10.13□□□□□ -0.79
PTCH1-219ENST00000549678 CHRNA2Q15822 529 aa10.13□□□□□ -0.79
PTCH1-219ENST00000549678 THRAP3Q9Y2W1 955 aaKnown RBP10.13□□□□□ -0.79
PTCH1-219ENST00000549678 NLRP6P59044 892 aa10.12□□□□□ -0.79
PTCH1-219ENST00000549678 FAM196AQ6ZSG2 479 aa10.12□□□□□ -0.79
PTCH1-219ENST00000549678 DEFB132Q7Z7B7 95 aa10.12□□□□□ -0.79
PTCH1-219ENST00000549678 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.12□□□□□ -0.79
PTCH1-219ENST00000549678 TCP11L2Q8N4U5 519 aa10.12□□□□□ -0.79
PTCH1-219ENST00000549678 STRN4Q9NRL3 753 aa10.12□□□□□ -0.79
PTCH1-219ENST00000549678 DISP2A7MBM2 1401 aa10.12□□□□□ -0.79
PTCH1-219ENST00000549678 AATKQ6ZMQ8 1374 aa10.12□□□□□ -0.79
PTCH1-219ENST00000549678 NINLQ9Y2I6 1382 aa10.12□□□□□ -0.79
PTCH1-219ENST00000549678 PIK3C2AO00443 1686 aa10.12□□□□□ -0.79
PTCH1-219ENST00000549678 TTC21AQ8NDW8 1320 aa10.11□□□□□ -0.79
PTCH1-219ENST00000549678 SOX12O15370 315 aa10.11□□□□□ -0.79
PTCH1-219ENST00000549678 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
PTCH1-219ENST00000549678 TESK2Q96S53 571 aa10.11□□□□□ -0.79
PTCH1-219ENST00000549678 SLC12A5Q9H2X9 1139 aa10.11□□□□□ -0.79
PTCH1-219ENST00000549678 SLIT3O75094 1523 aa10.11□□□□□ -0.79
PTCH1-219ENST00000549678 TTC21BQ7Z4L5 1316 aa10.1□□□□□ -0.79
PTCH1-219ENST00000549678 LMO7Q8WWI1 1683 aa10.1□□□□□ -0.79
PTCH1-219ENST00000549678 CAMTA1Q9Y6Y1 1673 aa10.1□□□□□ -0.79
PTCH1-219ENST00000549678 PUS7Q96PZ0 661 aaKnown RBP10.1□□□□□ -0.79
PTCH1-219ENST00000549678 PARD3Q8TEW0 1356 aa10.1□□□□□ -0.79
PTCH1-219ENST00000549678 RGPD1P0DJD0 1748 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms