RNA–Protein interactions for RNA: ENST00000549671.5

SYT1-208, Transcript of synaptotagmin 1, humanhuman

TSL 1 (best)

Gene SYT1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-208ENST00000549671 DACH1Q9UI36 760 aa10.29□□□□□ -0.76
SYT1-208ENST00000549671 F12P00748 615 aaPredicted RBP10.28□□□□□ -0.76
SYT1-208ENST00000549671 ZNF511Q8NB15 262 aa10.28□□□□□ -0.76
SYT1-208ENST00000549671 HPS1Q92902 700 aa10.27□□□□□ -0.77
SYT1-208ENST00000549671 LILRB3O75022 631 aa10.26□□□□□ -0.77
SYT1-208ENST00000549671 VARSP26640 1264 aaKnown RBP10.26□□□□□ -0.77
SYT1-208ENST00000549671 ATP13A2Q9NQ11 1180 aa10.26□□□□□ -0.77
SYT1-208ENST00000549671 LIMD1Q9UGP4 676 aa10.26□□□□□ -0.77
SYT1-208ENST00000549671 ALDH1A1P00352 501 aa10.25□□□□□ -0.77
SYT1-208ENST00000549671 BAP1Q92560 729 aa10.25□□□□□ -0.77
SYT1-208ENST00000549671 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
SYT1-208ENST00000549671 GMPR2Q9P2T1 348 aaKnown RBP10.25□□□□□ -0.77
SYT1-208ENST00000549671 CABLES1Q8TDN4 633 aa10.23□□□□□ -0.77
SYT1-208ENST00000549671 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
SYT1-208ENST00000549671 CLK2P49760 499 aaKnown RBP10.22□□□□□ -0.77
SYT1-208ENST00000549671 QPCTQ16769 361 aa10.22□□□□□ -0.77
SYT1-208ENST00000549671 LCE2AQ5TA79 106 aaPredicted RBP10.22□□□□□ -0.77
SYT1-208ENST00000549671 TRIM47Q96LD4 638 aa10.22□□□□□ -0.77
SYT1-208ENST00000549671 EIF4G1Q04637 1599 aaKnown RBP10.22□□□□□ -0.77
SYT1-208ENST00000549671 PLEKHG3A1L390 1219 aa10.21□□□□□ -0.77
SYT1-208ENST00000549671 C11orf95C9JLR9 678 aaPredicted RBP10.21□□□□□ -0.77
SYT1-208ENST00000549671 KIFC2Q96AC6 838 aa10.21□□□□□ -0.77
SYT1-208ENST00000549671 CTHP32929 405 aa10.2□□□□□ -0.78
SYT1-208ENST00000549671 LINC01559Q495D7 138 aa10.2□□□□□ -0.78
SYT1-208ENST00000549671 WASF2Q9Y6W5 498 aa10.2□□□□□ -0.78
SYT1-208ENST00000549671 TREML4Q6UXN2 200 aa10.19□□□□□ -0.78
SYT1-208ENST00000549671 MAP10Q9P2G4 905 aa10.19□□□□□ -0.78
SYT1-208ENST00000549671 NUTM2BA6NNL0 878 aaPredicted RBP10.18□□□□□ -0.78
SYT1-208ENST00000549671 NUTM2EB1AL46 878 aaPredicted RBP10.18□□□□□ -0.78
SYT1-208ENST00000549671 PER1O15534 1290 aaPredicted RBP10.18□□□□□ -0.78
SYT1-208ENST00000549671 CSPP1Q1MSJ5 1256 aa10.18□□□□□ -0.78
SYT1-208ENST00000549671 NUTM2DQ5VT03 806 aaPredicted RBP10.18□□□□□ -0.78
SYT1-208ENST00000549671 NUTM2AQ8IVF1 878 aaPredicted RBP10.18□□□□□ -0.78
SYT1-208ENST00000549671 ARMC2Q8NEN0 867 aa10.18□□□□□ -0.78
SYT1-208ENST00000549671 HELBQ8NG08 1087 aaPredicted RBP10.18□□□□□ -0.78
SYT1-208ENST00000549671 CDK15Q96Q40 435 aa10.18□□□□□ -0.78
SYT1-208ENST00000549671 FAM174AQ8TBP5 190 aa10.17□□□□□ -0.78
SYT1-208ENST00000549671 TLL2Q9Y6L7 1015 aa10.17□□□□□ -0.78
SYT1-208ENST00000549671 SH3D19Q5HYK7 790 aa10.15□□□□□ -0.78
SYT1-208ENST00000549671 RTL5Q5HYW3 569 aaPredicted RBP10.15□□□□□ -0.78
SYT1-208ENST00000549671 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
SYT1-208ENST00000549671 CAPN5O15484 640 aaPredicted RBP10.14□□□□□ -0.79
SYT1-208ENST00000549671 ADH1CP00326 375 aa10.14□□□□□ -0.79
SYT1-208ENST00000549671 SKIV2LQ15477 1246 aaKnown RBP10.14□□□□□ -0.79
SYT1-208ENST00000549671 BPHLQ86WA6 291 aaPredicted RBP10.14□□□□□ -0.79
SYT1-208ENST00000549671 GPKOWQ92917 476 aaPredicted RBP eCLIP10.14□□□□□ -0.79
SYT1-208ENST00000549671 KDM4CQ9H3R0 1056 aa10.14□□□□□ -0.79
SYT1-208ENST00000549671 SNRPBP14678 240 aaKnown RBP10.13□□□□□ -0.79
SYT1-208ENST00000549671 NBPF14Q5TI25 921 aa10.13□□□□□ -0.79
SYT1-208ENST00000549671 SH3RF1Q7Z6J0 888 aa10.13□□□□□ -0.79
SYT1-208ENST00000549671 C1QTNF2Q9BXJ5 285 aa10.13□□□□□ -0.79
SYT1-208ENST00000549671 NNTQ13423 1086 aa10.12□□□□□ -0.79
SYT1-208ENST00000549671 FOXJ1Q92949 421 aa10.12□□□□□ -0.79
SYT1-208ENST00000549671 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.12□□□□□ -0.79
SYT1-208ENST00000549671 NFX1Q12986 1120 aaKnown RBP10.11□□□□□ -0.79
SYT1-208ENST00000549671 C4orf48Q5BLP8 95 aa10.11□□□□□ -0.79
SYT1-208ENST00000549671 PPP2R2DQ66LE6 453 aa10.11□□□□□ -0.79
SYT1-208ENST00000549671 TRIM46Q7Z4K8 759 aa10.11□□□□□ -0.79
SYT1-208ENST00000549671 KLF16Q9BXK1 252 aaPredicted RBP10.11□□□□□ -0.79
SYT1-208ENST00000549671 NR5A1Q13285 461 aa10.1□□□□□ -0.79
SYT1-208ENST00000549671 SH3BP5LQ7L8J4 393 aa10.1□□□□□ -0.79
SYT1-208ENST00000549671 TRMT44Q8IYL2 757 aaKnown RBP10.1□□□□□ -0.79
SYT1-208ENST00000549671 TSC1Q92574 1164 aa10.1□□□□□ -0.79
SYT1-208ENST00000549671 POLR3EQ9NVU0 708 aa10.1□□□□□ -0.79
SYT1-208ENST00000549671 MAP4K5Q9Y4K4 846 aa10.1□□□□□ -0.79
SYT1-208ENST00000549671 WFS1O76024 890 aa10.09□□□□□ -0.79
SYT1-208ENST00000549671 CUX2O14529 1486 aa10.09□□□□□ -0.79
SYT1-208ENST00000549671 TIMP2P16035 220 aa10.08□□□□□ -0.8
SYT1-208ENST00000549671 GPBP1L1Q9HC44 474 aaPredicted RBP10.08□□□□□ -0.8
SYT1-208ENST00000549671 FAM117AQ9C073 453 aa10.07□□□□□ -0.8
SYT1-208ENST00000549671 ZC3H4Q9UPT8 1303 aaKnown RBP10.07□□□□□ -0.8
SYT1-208ENST00000549671 WIPF1O43516 503 aa10.06□□□□□ -0.8
SYT1-208ENST00000549671 BMP1P13497 986 aa10.06□□□□□ -0.8
SYT1-208ENST00000549671 NPAS3Q8IXF0 933 aa10.06□□□□□ -0.8
SYT1-208ENST00000549671 TERTO14746 1132 aaKnown RBP10.05□□□□□ -0.8
SYT1-208ENST00000549671 GRM5P41594 1212 aa10.05□□□□□ -0.8
SYT1-208ENST00000549671 WDR4P57081 412 aaKnown RBP10.05□□□□□ -0.8
SYT1-208ENST00000549671 CTDSPL2Q05D32 466 aa10.05□□□□□ -0.8
SYT1-208ENST00000549671 AGERQ15109 404 aa10.05□□□□□ -0.8
SYT1-208ENST00000549671 GOPCQ9HD26 462 aa10.05□□□□□ -0.8
SYT1-208ENST00000549671 DCAF1Q9Y4B6 1507 aa10.04□□□□□ -0.8
SYT1-208ENST00000549671 MRPL14Q6P1L8 145 aaKnown RBP10.04□□□□□ -0.8
SYT1-208ENST00000549671 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
SYT1-208ENST00000549671 NR3C2P08235 984 aa10.02□□□□□ -0.81
SYT1-208ENST00000549671 FBXO31Q5XUX0 539 aaPredicted RBP10.02□□□□□ -0.81
SYT1-208ENST00000549671 ZFP42Q96MM3 310 aa10.02□□□□□ -0.81
SYT1-208ENST00000549671 PROCA1Q8NCQ7 364 aaPredicted RBP10.01□□□□□ -0.81
SYT1-208ENST00000549671 FKBPLQ9UIM3 349 aa10.01□□□□□ -0.81
SYT1-208ENST00000549671 SCARF1Q14162 830 aa10□□□□□ -0.81
SYT1-208ENST00000549671 ARID5BQ14865 1188 aa10□□□□□ -0.81
SYT1-208ENST00000549671 NXF1Q9UBU9 619 aaKnown RBP10□□□□□ -0.81
SYT1-208ENST00000549671 CDV3Q9UKY7 258 aaKnown RBP10□□□□□ -0.81
SYT1-208ENST00000549671 GPSM3Q9Y4H4 160 aa10□□□□□ -0.81
SYT1-208ENST00000549671 ZIC2O95409 532 aaPredicted RBP9.99□□□□□ -0.81
SYT1-208ENST00000549671 ERFEQ4G0M1 354 aa9.99□□□□□ -0.81
SYT1-208ENST00000549671 LCE2CQ5TA81 110 aa9.99□□□□□ -0.81
SYT1-208ENST00000549671 LRRN4Q8WUT4 740 aa9.99□□□□□ -0.81
SYT1-208ENST00000549671 ITPKCQ96DU7 683 aa9.99□□□□□ -0.81
SYT1-208ENST00000549671 SCRIBQ14160 1630 aa9.98□□□□□ -0.81
SYT1-208ENST00000549671 FSHRP23945 695 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms