RNA–Protein interactions for RNA: ENST00000549295.1

KRT4-202, Transcript of keratin 4, humanhuman

TSL 4

Gene KRT4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-202ENST00000549295 SHANK2Q9UPX8 1470 aa6.94□□□□□ -1.3
KRT4-202ENST00000549295 OFD1O75665 1012 aa6.94□□□□□ -1.3
KRT4-202ENST00000549295 MCM5P33992 734 aa6.94□□□□□ -1.3
KRT4-202ENST00000549295 SLC4A3P48751 1232 aa6.94□□□□□ -1.3
KRT4-202ENST00000549295 CCDC173Q0VFZ6 552 aa6.94□□□□□ -1.3
KRT4-202ENST00000549295 RSPH4AQ5TD94 716 aa6.94□□□□□ -1.3
KRT4-202ENST00000549295 TRMT2AQ8IZ69 625 aaKnown RBP6.94□□□□□ -1.3
KRT4-202ENST00000549295 PPP1R9BQ96SB3 815 aa6.94□□□□□ -1.3
KRT4-202ENST00000549295 GRPEL1Q9HAV7 217 aa6.94□□□□□ -1.3
KRT4-202ENST00000549295 DEPDC5O75140 1603 aa6.94□□□□□ -1.3
KRT4-202ENST00000549295 ALKQ9UM73 1620 aa6.94□□□□□ -1.3
KRT4-202ENST00000549295 E9PCH4 1651 aa6.93□□□□□ -1.3
KRT4-202ENST00000549295 DAPK1P53355 1430 aa6.93□□□□□ -1.3
KRT4-202ENST00000549295 NLRP1Q9C000 1473 aa6.93□□□□□ -1.3
KRT4-202ENST00000549295 PER1O15534 1290 aaPredicted RBP6.93□□□□□ -1.3
KRT4-202ENST00000549295 TRAK2O60296 914 aa6.93□□□□□ -1.3
KRT4-202ENST00000549295 HSP90B1P14625 803 aaKnown RBP6.93□□□□□ -1.3
KRT4-202ENST00000549295 GGT6Q6P531 493 aa6.93□□□□□ -1.3
KRT4-202ENST00000549295 PMFBP1Q8TBY8 1022 aa6.93□□□□□ -1.3
KRT4-202ENST00000549295 ANP32BQ92688 251 aaKnown RBP6.93□□□□□ -1.3
KRT4-202ENST00000549295 TBC1D32Q96NH3 1257 aa6.93□□□□□ -1.3
KRT4-202ENST00000549295 PRDM4Q9UKN5 801 aa6.93□□□□□ -1.3
KRT4-202ENST00000549295 ZNF777Q9ULD5 760 aaPredicted RBP6.93□□□□□ -1.3
KRT4-202ENST00000549295 VWDEQ8N2E2 1590 aa6.93□□□□□ -1.3
KRT4-202ENST00000549295 ZNF521Q96K83 1311 aa6.93□□□□□ -1.3
KRT4-202ENST00000549295 ADGRL2O95490 1459 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 KDM5DQ9BY66 1539 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 MED1Q15648 1581 aaPredicted RBP6.92□□□□□ -1.3
KRT4-202ENST00000549295 TOM1O60784 492 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 GOLGA2Q08379 1002 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 CSPP1Q1MSJ5 1256 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 DUSP27Q5VZP5 1158 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 ZSCAN30Q86W11 494 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 MS4A3Q96HJ5 214 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 CARD11Q9BXL7 1154 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 TSPYL2Q9H2G4 693 aaPredicted RBP6.92□□□□□ -1.3
KRT4-202ENST00000549295 ZNF644Q9H582 1327 aaPredicted RBP6.92□□□□□ -1.3
KRT4-202ENST00000549295 TNRQ92752 1358 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 ABCC5O15440 1437 aa6.92□□□□□ -1.3
KRT4-202ENST00000549295 HSPA1LP34931 641 aa6.91□□□□□ -1.3
KRT4-202ENST00000549295 THEMISQ8N1K5 641 aaPredicted RBP6.91□□□□□ -1.3
KRT4-202ENST00000549295 CCDC61Q9Y6R9 512 aa6.91□□□□□ -1.3
KRT4-202ENST00000549295 GPRASP1Q5JY77 1395 aa6.91□□□□□ -1.3
KRT4-202ENST00000549295 NPC1L1Q9UHC9 1359 aa6.91□□□□□ -1.3
KRT4-202ENST00000549295 ARHGEF5Q12774 1597 aa6.91□□□□□ -1.3
KRT4-202ENST00000549295 DYNC1I1O14576 645 aa6.9□□□□□ -1.3
KRT4-202ENST00000549295 SLFN5Q08AF3 891 aa6.9□□□□□ -1.3
KRT4-202ENST00000549295 TAF3Q5VWG9 929 aa6.9□□□□□ -1.3
KRT4-202ENST00000549295 FBXO31Q5XUX0 539 aaPredicted RBP6.9□□□□□ -1.3
KRT4-202ENST00000549295 CLEC17AQ6ZS10 378 aa6.9□□□□□ -1.3
KRT4-202ENST00000549295 ANKLE2Q86XL3 938 aa6.9□□□□□ -1.3
KRT4-202ENST00000549295 SNX21Q969T3 373 aa6.9□□□□□ -1.3
KRT4-202ENST00000549295 CDCA7LQ96GN5 454 aa6.9□□□□□ -1.3
KRT4-202ENST00000549295 GBP4Q96PP9 640 aa6.9□□□□□ -1.3
KRT4-202ENST00000549295 CCDC141Q6ZP82 1450 aa6.9□□□□□ -1.31
KRT4-202ENST00000549295 LAMC1P11047 1609 aa6.9□□□□□ -1.31
KRT4-202ENST00000549295 VIRMAQ69YN4 1812 aaKnown RBP6.9□□□□□ -1.31
KRT4-202ENST00000549295 E9PSI1 815 aa6.89□□□□□ -1.31
KRT4-202ENST00000549295 KIF3BO15066 747 aa6.89□□□□□ -1.31
KRT4-202ENST00000549295 ZNF500O60304 480 aaPredicted RBP6.89□□□□□ -1.31
KRT4-202ENST00000549295 TNNT2P45379 298 aaPredicted RBP6.89□□□□□ -1.31
KRT4-202ENST00000549295 ASTLQ6HA08 431 aaPredicted RBP6.89□□□□□ -1.31
KRT4-202ENST00000549295 TBC1D2Q9BYX2 928 aa6.89□□□□□ -1.31
KRT4-202ENST00000549295 GTPBP4Q9BZE4 634 aaKnown RBP6.89□□□□□ -1.31
KRT4-202ENST00000549295 NPHP4O75161 1426 aaPredicted RBP6.89□□□□□ -1.31
KRT4-202ENST00000549295 ARHGAP31Q2M1Z3 1444 aa6.89□□□□□ -1.31
KRT4-202ENST00000549295 RNF17Q9BXT8 1623 aaKnown RBP6.89□□□□□ -1.31
KRT4-202ENST00000549295 UGGT1Q9NYU2 1555 aa6.88□□□□□ -1.31
KRT4-202ENST00000549295 MAST1Q9Y2H9 1570 aa6.88□□□□□ -1.31
KRT4-202ENST00000549295 NKTRP30414 1462 aaKnown RBP6.88□□□□□ -1.31
KRT4-202ENST00000549295 NCOA3Q9Y6Q9 1424 aa6.88□□□□□ -1.31
KRT4-202ENST00000549295 POTEB2H3BUK9 544 aa6.88□□□□□ -1.31
KRT4-202ENST00000549295 ATMINO43313 823 aaPredicted RBP6.88□□□□□ -1.31
KRT4-202ENST00000549295 PLIN1O60240 522 aa6.88□□□□□ -1.31
KRT4-202ENST00000549295 KIF20AO95235 890 aa6.88□□□□□ -1.31
KRT4-202ENST00000549295 FGD1P98174 961 aa6.88□□□□□ -1.31
KRT4-202ENST00000549295 RBM10P98175 930 aaKnown RBP6.88□□□□□ -1.31
KRT4-202ENST00000549295 KIAA1211Q6ZU35 1233 aa6.88□□□□□ -1.31
KRT4-202ENST00000549295 STAC3Q96MF2 364 aa6.88□□□□□ -1.31
KRT4-202ENST00000549295 CHIC2Q9UKJ5 165 aa6.88□□□□□ -1.31
KRT4-202ENST00000549295 IQGAP1P46940 1657 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 LRRC7Q96NW7 1537 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 ARHGAP23Q9P227 1491 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 PIK3C2GO75747 1445 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 ST20-MTHFSA0A0A6YYL1 179 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 MSNP26038 577 aaKnown RBP6.87□□□□□ -1.31
KRT4-202ENST00000549295 DDIT3P35638 169 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 CDCA8Q53HL2 280 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 SMC5Q8IY18 1101 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 CLUAP1Q96AJ1 413 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 KIF12Q96FN5 646 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 RWDD1Q9H446 243 aaPredicted RBP6.87□□□□□ -1.31
KRT4-202ENST00000549295 STRCP1A6NGW2 1772 aa6.87□□□□□ -1.31
KRT4-202ENST00000549295 ZC3H13Q5T200 1668 aaKnown RBP6.87□□□□□ -1.31
KRT4-202ENST00000549295 EIF2AK4Q9P2K8 1649 aaKnown RBP6.87□□□□□ -1.31
KRT4-202ENST00000549295 SYNMO15061 1565 aa6.86□□□□□ -1.31
KRT4-202ENST00000549295 ABCC3O15438 1527 aa6.86□□□□□ -1.31
KRT4-202ENST00000549295 GOLGA6L22H0YM25 854 aa6.86□□□□□ -1.31
KRT4-202ENST00000549295 RBM25P49756 843 aaKnown RBP6.86□□□□□ -1.31
KRT4-202ENST00000549295 RGS3P49796 1198 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms