RNA–Protein interactions for RNA: ENST00000548670.1

PPFIA2-212, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-212ENST00000548670 SPTLC1O15269 473 aa8.78□□□□□ -1
PPFIA2-212ENST00000548670 CTHP32929 405 aa8.78□□□□□ -1
PPFIA2-212ENST00000548670 INSM1Q01101 510 aaPredicted RBP8.78□□□□□ -1
PPFIA2-212ENST00000548670 ZBTB3Q9H5J0 574 aa8.77□□□□□ -1.01
PPFIA2-212ENST00000548670 PCDHB15Q9Y5E8 787 aa8.77□□□□□ -1.01
PPFIA2-212ENST00000548670 HRCP23327 699 aa8.76□□□□□ -1.01
PPFIA2-212ENST00000548670 PRPF38BQ5VTL8 546 aaKnown RBP8.76□□□□□ -1.01
PPFIA2-212ENST00000548670 RIC3Q7Z5B4 369 aa8.76□□□□□ -1.01
PPFIA2-212ENST00000548670 SLC16A10Q8TF71 515 aa8.76□□□□□ -1.01
PPFIA2-212ENST00000548670 TRIM46Q7Z4K8 759 aa8.75□□□□□ -1.01
PPFIA2-212ENST00000548670 FAM174AQ8TBP5 190 aa8.75□□□□□ -1.01
PPFIA2-212ENST00000548670 STK17AQ9UEE5 414 aa8.75□□□□□ -1.01
PPFIA2-212ENST00000548670 BMP1P13497 986 aa8.74□□□□□ -1.01
PPFIA2-212ENST00000548670 NXF1Q9UBU9 619 aaKnown RBP8.74□□□□□ -1.01
PPFIA2-212ENST00000548670 TLL2Q9Y6L7 1015 aa8.74□□□□□ -1.01
PPFIA2-212ENST00000548670 CFAP99D6REC4 459 aa8.73□□□□□ -1.01
PPFIA2-212ENST00000548670 NNTQ13423 1086 aa8.73□□□□□ -1.01
PPFIA2-212ENST00000548670 NPAS3Q8IXF0 933 aa8.72□□□□□ -1.01
PPFIA2-212ENST00000548670 SCARF1Q14162 830 aa8.71□□□□□ -1.02
PPFIA2-212ENST00000548670 NUTM2BA6NNL0 878 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-212ENST00000548670 NUTM2EB1AL46 878 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-212ENST00000548670 F12P00748 615 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-212ENST00000548670 CSPP1Q1MSJ5 1256 aa8.7□□□□□ -1.02
PPFIA2-212ENST00000548670 NUTM2DQ5VT03 806 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-212ENST00000548670 NUTM2AQ8IVF1 878 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-212ENST00000548670 CABLES1Q8TDN4 633 aa8.7□□□□□ -1.02
PPFIA2-212ENST00000548670 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
PPFIA2-212ENST00000548670 MAP10Q9P2G4 905 aa8.7□□□□□ -1.02
PPFIA2-212ENST00000548670 ADH1CP00326 375 aa8.69□□□□□ -1.02
PPFIA2-212ENST00000548670 WDR4P57081 412 aaKnown RBP8.69□□□□□ -1.02
PPFIA2-212ENST00000548670 PDE4DQ08499 809 aa8.69□□□□□ -1.02
PPFIA2-212ENST00000548670 ARID5BQ14865 1188 aa8.69□□□□□ -1.02
PPFIA2-212ENST00000548670 AGERQ15109 404 aa8.69□□□□□ -1.02
PPFIA2-212ENST00000548670 TUSC1Q2TAM9 212 aa8.69□□□□□ -1.02
PPFIA2-212ENST00000548670 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
PPFIA2-212ENST00000548670 FOXJ1Q92949 421 aa8.69□□□□□ -1.02
PPFIA2-212ENST00000548670 CDK15Q96Q40 435 aa8.69□□□□□ -1.02
PPFIA2-212ENST00000548670 MRPL14Q6P1L8 145 aaKnown RBP8.68□□□□□ -1.02
PPFIA2-212ENST00000548670 BPHLQ86WA6 291 aaPredicted RBP8.68□□□□□ -1.02
PPFIA2-212ENST00000548670 ARMC2Q8NEN0 867 aa8.68□□□□□ -1.02
PPFIA2-212ENST00000548670 TSC1Q92574 1164 aa8.68□□□□□ -1.02
PPFIA2-212ENST00000548670 IRF7Q92985 503 aa8.68□□□□□ -1.02
PPFIA2-212ENST00000548670 TIMP2P16035 220 aa8.67□□□□□ -1.02
PPFIA2-212ENST00000548670 NR5A1Q13285 461 aa8.67□□□□□ -1.02
PPFIA2-212ENST00000548670 MYSM1Q5VVJ2 828 aa8.67□□□□□ -1.02
PPFIA2-212ENST00000548670 PER1O15534 1290 aaPredicted RBP8.66□□□□□ -1.02
PPFIA2-212ENST00000548670 KLF16Q9BXK1 252 aaPredicted RBP8.66□□□□□ -1.02
PPFIA2-212ENST00000548670 LIMD1Q9UGP4 676 aa8.66□□□□□ -1.02
PPFIA2-212ENST00000548670 LILRB3O75022 631 aa8.65□□□□□ -1.02
PPFIA2-212ENST00000548670 FAM181BA6NEQ2 426 aa8.64□□□□□ -1.03
PPFIA2-212ENST00000548670 H3BM21 787 aa8.64□□□□□ -1.03
PPFIA2-212ENST00000548670 QPCTQ16769 361 aa8.64□□□□□ -1.03
PPFIA2-212ENST00000548670 HELBQ8NG08 1087 aaPredicted RBP8.64□□□□□ -1.03
PPFIA2-212ENST00000548670 PURBQ96QR8 312 aaKnown RBP8.64□□□□□ -1.03
PPFIA2-212ENST00000548670 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
PPFIA2-212ENST00000548670 ZIC2O95409 532 aaPredicted RBP8.63□□□□□ -1.03
PPFIA2-212ENST00000548670 SLC24A3Q9HC58 644 aa8.63□□□□□ -1.03
PPFIA2-212ENST00000548670 GMPRP36959 345 aa8.62□□□□□ -1.03
PPFIA2-212ENST00000548670 GRM5P41594 1212 aa8.62□□□□□ -1.03
PPFIA2-212ENST00000548670 VEGFBP49765 207 aa8.62□□□□□ -1.03
PPFIA2-212ENST00000548670 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
PPFIA2-212ENST00000548670 NBPF14Q5TI25 921 aa8.62□□□□□ -1.03
PPFIA2-212ENST00000548670 UPP2O95045 317 aa8.61□□□□□ -1.03
PPFIA2-212ENST00000548670 ITPKCQ96DU7 683 aa8.61□□□□□ -1.03
PPFIA2-212ENST00000548670 ZFAND3Q9H8U3 227 aa8.61□□□□□ -1.03
PPFIA2-212ENST00000548670 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
PPFIA2-212ENST00000548670 RTL5Q5HYW3 569 aaPredicted RBP8.6□□□□□ -1.03
PPFIA2-212ENST00000548670 NR3C2P08235 984 aa8.59□□□□□ -1.03
PPFIA2-212ENST00000548670 ZSCAN1Q8NBB4 408 aa8.59□□□□□ -1.03
PPFIA2-212ENST00000548670 GPKOWQ92917 476 aaPredicted RBP eCLIP8.59□□□□□ -1.03
PPFIA2-212ENST00000548670 C1QTNF2Q9BXJ5 285 aa8.59□□□□□ -1.03
PPFIA2-212ENST00000548670 MAN1A2O60476 641 aa8.58□□□□□ -1.04
PPFIA2-212ENST00000548670 C6orf118Q5T5N4 469 aa8.58□□□□□ -1.04
PPFIA2-212ENST00000548670 VASH1Q7L8A9 365 aaPredicted RBP8.58□□□□□ -1.04
PPFIA2-212ENST00000548670 SH3RF1Q7Z6J0 888 aa8.58□□□□□ -1.04
PPFIA2-212ENST00000548670 POLR3EQ9NVU0 708 aa8.58□□□□□ -1.04
PPFIA2-212ENST00000548670 MAP4K5Q9Y4K4 846 aa8.58□□□□□ -1.04
PPFIA2-212ENST00000548670 BMP2P12643 396 aa8.57□□□□□ -1.04
PPFIA2-212ENST00000548670 TRMT44Q8IYL2 757 aaKnown RBP8.57□□□□□ -1.04
PPFIA2-212ENST00000548670 ERBB4Q15303 1308 aa8.56□□□□□ -1.04
PPFIA2-212ENST00000548670 MAGEB6P1A0A0J9YX57 407 aa8.56□□□□□ -1.04
PPFIA2-212ENST00000548670 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
PPFIA2-212ENST00000548670 SH3BP5LQ7L8J4 393 aa8.56□□□□□ -1.04
PPFIA2-212ENST00000548670 EMILIN1Q9Y6C2 1016 aa8.56□□□□□ -1.04
PPFIA2-212ENST00000548670 FSHRP23945 695 aa8.55□□□□□ -1.04
PPFIA2-212ENST00000548670 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
PPFIA2-212ENST00000548670 CTDSPL2Q05D32 466 aa8.54□□□□□ -1.04
PPFIA2-212ENST00000548670 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
PPFIA2-212ENST00000548670 TSEN34Q9BSV6 310 aaKnown RBP8.54□□□□□ -1.04
PPFIA2-212ENST00000548670 CCDC116Q8IYX3 515 aa8.53□□□□□ -1.04
PPFIA2-212ENST00000548670 CARD14Q9BXL6 1004 aa8.53□□□□□ -1.04
PPFIA2-212ENST00000548670 VSIG8P0DPA2 414 aa8.52□□□□□ -1.05
PPFIA2-212ENST00000548670 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.05
PPFIA2-212ENST00000548670 PDXDC2PQ6P474 469 aa8.52□□□□□ -1.05
PPFIA2-212ENST00000548670 SKIV2LQ15477 1246 aaKnown RBP8.51□□□□□ -1.05
PPFIA2-212ENST00000548670 ERFEQ4G0M1 354 aa8.51□□□□□ -1.05
PPFIA2-212ENST00000548670 ARHGAP9Q9BRR9 750 aa8.51□□□□□ -1.05
PPFIA2-212ENST00000548670 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
PPFIA2-212ENST00000548670 CDV3Q9UKY7 258 aaKnown RBP8.51□□□□□ -1.05
PPFIA2-212ENST00000548670 SOS2Q07890 1332 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms