RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 COL22A1Q8NFW1 1626 aaPredicted RBP12.29□□□□□ -0.44
SP1-203ENST00000548560 SBNO2Q9Y2G9 1366 aa12.29□□□□□ -0.44
SP1-203ENST00000548560 PMFBP1Q8TBY8 1022 aa12.28□□□□□ -0.44
SP1-203ENST00000548560 NUDT16Q96DE0 195 aaKnown RBP12.28□□□□□ -0.44
SP1-203ENST00000548560 PRR36Q9H6K5 1346 aa12.28□□□□□ -0.44
SP1-203ENST00000548560 PNPLA6Q8IY17 1366 aa12.28□□□□□ -0.44
SP1-203ENST00000548560 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
SP1-203ENST00000548560 XPCQ01831 940 aaPredicted RBP12.27□□□□□ -0.45
SP1-203ENST00000548560 PSME1Q06323 249 aa12.27□□□□□ -0.45
SP1-203ENST00000548560 NGDNQ8NEJ9 315 aaKnown RBP12.27□□□□□ -0.45
SP1-203ENST00000548560 MARF1Q9Y4F3 1742 aaKnown RBP12.27□□□□□ -0.45
SP1-203ENST00000548560 USP47Q96K76 1375 aa12.27□□□□□ -0.45
SP1-203ENST00000548560 MEX3CQ5U5Q3 659 aaKnown RBP12.26□□□□□ -0.45
SP1-203ENST00000548560 KRT28Q7Z3Y7 464 aa12.26□□□□□ -0.45
SP1-203ENST00000548560 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
SP1-203ENST00000548560 TNS3Q68CZ2 1445 aa12.26□□□□□ -0.45
SP1-203ENST00000548560 PPIP5K1Q6PFW1 1433 aa12.26□□□□□ -0.45
SP1-203ENST00000548560 ALS2Q96Q42 1657 aa12.26□□□□□ -0.45
SP1-203ENST00000548560 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
SP1-203ENST00000548560 CABP2Q9NPB3 220 aa12.25□□□□□ -0.45
SP1-203ENST00000548560 ATAD2Q6PL18 1390 aa12.25□□□□□ -0.45
SP1-203ENST00000548560 ABCA3Q99758 1704 aa12.25□□□□□ -0.45
SP1-203ENST00000548560 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
SP1-203ENST00000548560 NUTM2BA6NNL0 878 aaPredicted RBP12.24□□□□□ -0.45
SP1-203ENST00000548560 NUTM2EB1AL46 878 aaPredicted RBP12.24□□□□□ -0.45
SP1-203ENST00000548560 ABCB7O75027 752 aa12.24□□□□□ -0.45
SP1-203ENST00000548560 IFNLR1Q8IU57 520 aaPredicted RBP12.24□□□□□ -0.45
SP1-203ENST00000548560 NUTM2AQ8IVF1 878 aaPredicted RBP12.24□□□□□ -0.45
SP1-203ENST00000548560 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
SP1-203ENST00000548560 SPATA31A3Q5VYP0 1347 aa12.23□□□□□ -0.45
SP1-203ENST00000548560 POLR3AO14802 1390 aaPredicted RBP12.22□□□□□ -0.45
SP1-203ENST00000548560 ST20-MTHFSA0A0A6YYL1 179 aa12.22□□□□□ -0.45
SP1-203ENST00000548560 LMOD2Q6P5Q4 547 aa12.22□□□□□ -0.45
SP1-203ENST00000548560 MON2Q7Z3U7 1717 aa12.22□□□□□ -0.45
SP1-203ENST00000548560 ACEP12821 1306 aa12.21□□□□□ -0.45
SP1-203ENST00000548560 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
SP1-203ENST00000548560 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.45
SP1-203ENST00000548560 PLEKHG3A1L390 1219 aa12.2□□□□□ -0.46
SP1-203ENST00000548560 CRYBG1Q9Y4K1 1723 aa12.2□□□□□ -0.46
SP1-203ENST00000548560 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
SP1-203ENST00000548560 TMF1P82094 1093 aa12.19□□□□□ -0.46
SP1-203ENST00000548560 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
SP1-203ENST00000548560 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
SP1-203ENST00000548560 NRKQ7Z2Y5 1582 aa12.18□□□□□ -0.46
SP1-203ENST00000548560 ADAMTS2O95450 1211 aa12.18□□□□□ -0.46
SP1-203ENST00000548560 TESK2Q96S53 571 aa12.18□□□□□ -0.46
SP1-203ENST00000548560 CABP1Q9NZU7 370 aa12.18□□□□□ -0.46
SP1-203ENST00000548560 NINLQ9Y2I6 1382 aa12.18□□□□□ -0.46
SP1-203ENST00000548560 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
SP1-203ENST00000548560 EIF4G2P78344 907 aaKnown RBP eCLIP12.17□□□□□ -0.46
SP1-203ENST00000548560 CDCA8Q53HL2 280 aa12.17□□□□□ -0.46
SP1-203ENST00000548560 TMC1Q8TDI8 760 aa12.17□□□□□ -0.46
SP1-203ENST00000548560 C8orf37Q96NL8 207 aa12.17□□□□□ -0.46
SP1-203ENST00000548560 USP6P35125 1406 aa12.17□□□□□ -0.46
SP1-203ENST00000548560 PLCH1Q4KWH8 1693 aa12.16□□□□□ -0.46
SP1-203ENST00000548560 PUS7Q96PZ0 661 aaKnown RBP12.16□□□□□ -0.46
SP1-203ENST00000548560 PIK3C2AO00443 1686 aa12.16□□□□□ -0.46
SP1-203ENST00000548560 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.15□□□□□ -0.46
SP1-203ENST00000548560 NWD2Q9ULI1 1742 aa12.15□□□□□ -0.46
SP1-203ENST00000548560 ZNF772Q68DY9 489 aaPredicted RBP12.15□□□□□ -0.46
SP1-203ENST00000548560 HDGFL2Q7Z4V5 671 aaPredicted RBP12.15□□□□□ -0.46
SP1-203ENST00000548560 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
SP1-203ENST00000548560 MYOM1P52179 1685 aa12.15□□□□□ -0.46
SP1-203ENST00000548560 KTN1Q86UP2 1357 aaKnown RBP12.15□□□□□ -0.46
SP1-203ENST00000548560 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
SP1-203ENST00000548560 KLHL34Q8N239 644 aa12.14□□□□□ -0.47
SP1-203ENST00000548560 ABTB2Q8N961 1025 aa12.14□□□□□ -0.47
SP1-203ENST00000548560 NGLY1Q96IV0 654 aa12.14□□□□□ -0.47
SP1-203ENST00000548560 TERF2IPQ9NYB0 399 aa12.14□□□□□ -0.47
SP1-203ENST00000548560 COL14A1Q05707 1796 aaKnown RBP12.14□□□□□ -0.47
SP1-203ENST00000548560 AFF2P51816 1311 aa12.13□□□□□ -0.47
SP1-203ENST00000548560 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
SP1-203ENST00000548560 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
SP1-203ENST00000548560 KIF20BQ96Q89 1820 aa12.12□□□□□ -0.47
SP1-203ENST00000548560 HSPA5P11021 654 aaKnown RBP12.12□□□□□ -0.47
SP1-203ENST00000548560 TTC21AQ8NDW8 1320 aa12.11□□□□□ -0.47
SP1-203ENST00000548560 USP54Q70EL1 1684 aa12.11□□□□□ -0.47
SP1-203ENST00000548560 CD163L1Q9NR16 1453 aa12.11□□□□□ -0.47
SP1-203ENST00000548560 A0A1W2PP64 1363 aa12.11□□□□□ -0.47
SP1-203ENST00000548560 NUTM2GQ5VZR2 741 aa12.11□□□□□ -0.47
SP1-203ENST00000548560 NLRP13Q86W25 1043 aa12.11□□□□□ -0.47
SP1-203ENST00000548560 EDC4Q6P2E9 1401 aaKnown RBP12.11□□□□□ -0.47
SP1-203ENST00000548560 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
SP1-203ENST00000548560 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
SP1-203ENST00000548560 SLC12A5Q9H2X9 1139 aa12.1□□□□□ -0.47
SP1-203ENST00000548560 USP21Q9UK80 565 aa12.1□□□□□ -0.47
SP1-203ENST00000548560 NRAPQ86VF7 1730 aa12.1□□□□□ -0.47
SP1-203ENST00000548560 RGS12O14924 1447 aa12.1□□□□□ -0.47
SP1-203ENST00000548560 SSH2Q76I76 1423 aa12.1□□□□□ -0.47
SP1-203ENST00000548560 TTC21BQ7Z4L5 1316 aa12.1□□□□□ -0.47
SP1-203ENST00000548560 ANKRD36BQ8N2N9 1353 aa12.09□□□□□ -0.47
SP1-203ENST00000548560 NLRP6P59044 892 aa12.09□□□□□ -0.47
SP1-203ENST00000548560 SLIT3O75094 1523 aa12.09□□□□□ -0.47
SP1-203ENST00000548560 LTN1O94822 1766 aa12.08□□□□□ -0.48
SP1-203ENST00000548560 SLIT2O94813 1529 aa12.08□□□□□ -0.48
SP1-203ENST00000548560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.08□□□□□ -0.48
SP1-203ENST00000548560 PRDM11Q9NQV5 511 aa12.08□□□□□ -0.48
SP1-203ENST00000548560 USP19O94966 1318 aa12.08□□□□□ -0.48
SP1-203ENST00000548560 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
SP1-203ENST00000548560 TRPC5Q9UL62 973 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms