RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 NBPF1Q3BBV0 1214 aa22.24■■□□□ 1.15
SNX29P1-201ENST00000548357 NUDT16Q96DE0 195 aaKnown RBP22.22■■□□□ 1.15
SNX29P1-201ENST00000548357 BTG4Q9NY30 223 aa22.22■■□□□ 1.15
SNX29P1-201ENST00000548357 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
SNX29P1-201ENST00000548357 BLMP54132 1417 aaPredicted RBP22.22■■□□□ 1.15
SNX29P1-201ENST00000548357 NRKQ7Z2Y5 1582 aa22.21■■□□□ 1.15
SNX29P1-201ENST00000548357 NGDNQ8NEJ9 315 aaKnown RBP22.21■■□□□ 1.15
SNX29P1-201ENST00000548357 STAC3Q96MF2 364 aa22.21■■□□□ 1.15
SNX29P1-201ENST00000548357 ONECUT3O60422 494 aaPredicted RBP22.2■■□□□ 1.14
SNX29P1-201ENST00000548357 DEFB132Q7Z7B7 95 aa22.2■■□□□ 1.14
SNX29P1-201ENST00000548357 CDK19Q9BWU1 502 aa22.2■■□□□ 1.14
SNX29P1-201ENST00000548357 TNS1Q9HBL0 1735 aaKnown RBP22.2■■□□□ 1.14
SNX29P1-201ENST00000548357 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
SNX29P1-201ENST00000548357 TRPM1Q7Z4N2 1603 aa22.18■■□□□ 1.14
SNX29P1-201ENST00000548357 FAM98CQ17RN3 349 aaKnown RBP22.17■■□□□ 1.14
SNX29P1-201ENST00000548357 NUTM2GQ5VZR2 741 aa22.17■■□□□ 1.14
SNX29P1-201ENST00000548357 RGPD1P0DJD0 1748 aa22.17■■□□□ 1.14
SNX29P1-201ENST00000548357 POLR3AO14802 1390 aaPredicted RBP22.16■■□□□ 1.14
SNX29P1-201ENST00000548357 CCDC125Q86Z20 511 aa22.16■■□□□ 1.14
SNX29P1-201ENST00000548357 KIAA0232Q92628 1395 aa22.15■■□□□ 1.14
SNX29P1-201ENST00000548357 LMO7Q8WWI1 1683 aa22.15■■□□□ 1.14
SNX29P1-201ENST00000548357 KRT27Q7Z3Y8 459 aa22.15■■□□□ 1.14
SNX29P1-201ENST00000548357 ACEP12821 1306 aa22.14■■□□□ 1.14
SNX29P1-201ENST00000548357 CHRNA2Q15822 529 aa22.14■■□□□ 1.13
SNX29P1-201ENST00000548357 SPATA31A5Q5VU36 1347 aa22.13■■□□□ 1.13
SNX29P1-201ENST00000548357 SPATA31A7Q8IWB4 1347 aa22.13■■□□□ 1.13
SNX29P1-201ENST00000548357 FAM182BQ5T319 152 aa22.13■■□□□ 1.13
SNX29P1-201ENST00000548357 ZRANB1Q9UGI0 708 aa22.12■■□□□ 1.13
SNX29P1-201ENST00000548357 A0A0G2JS52 829 aa22.11■■□□□ 1.13
SNX29P1-201ENST00000548357 MYT1Q01538 1121 aa22.11■■□□□ 1.13
SNX29P1-201ENST00000548357 PRDM11Q9NQV5 511 aa22.11■■□□□ 1.13
SNX29P1-201ENST00000548357 NBPF8Q3BBV2 869 aa22.1■■□□□ 1.13
SNX29P1-201ENST00000548357 CAMTA1Q9Y6Y1 1673 aa22.1■■□□□ 1.13
SNX29P1-201ENST00000548357 PPIP5K1Q6PFW1 1433 aa22.09■■□□□ 1.13
SNX29P1-201ENST00000548357 PLEKHG3A1L390 1219 aa22.09■■□□□ 1.13
SNX29P1-201ENST00000548357 ZC3H6P61129 1189 aaKnown RBP22.09■■□□□ 1.13
SNX29P1-201ENST00000548357 AKAP12Q02952 1782 aa22.09■■□□□ 1.13
SNX29P1-201ENST00000548357 PIK3C2AO00443 1686 aa22.08■■□□□ 1.13
SNX29P1-201ENST00000548357 SIN3AQ96ST3 1273 aa22.08■■□□□ 1.13
SNX29P1-201ENST00000548357 CABP2Q9NPB3 220 aa22.08■■□□□ 1.13
SNX29P1-201ENST00000548357 CCDC61Q9Y6R9 512 aa22.08■■□□□ 1.13
SNX29P1-201ENST00000548357 CENPJQ9HC77 1338 aaPredicted RBP22.07■■□□□ 1.12
SNX29P1-201ENST00000548357 L3MBTL2Q969R5 705 aa22.07■■□□□ 1.12
SNX29P1-201ENST00000548357 RGPD5Q99666 1765 aa22.07■■□□□ 1.12
SNX29P1-201ENST00000548357 SPATA31A1Q5TZJ5 1347 aa22.06■■□□□ 1.12
SNX29P1-201ENST00000548357 STRN4Q9NRL3 753 aa22.05■■□□□ 1.12
SNX29P1-201ENST00000548357 USP19O94966 1318 aa22.05■■□□□ 1.12
SNX29P1-201ENST00000548357 COL18A1P39060 1754 aa22.04■■□□□ 1.12
SNX29P1-201ENST00000548357 WNK3Q9BYP7 1800 aa22.04■■□□□ 1.12
SNX29P1-201ENST00000548357 SSH2Q76I76 1423 aa22.04■■□□□ 1.12
SNX29P1-201ENST00000548357 LRP5O75197 1615 aa22.03■■□□□ 1.12
SNX29P1-201ENST00000548357 SRPK2P78362 688 aaKnown RBP22.03■■□□□ 1.12
SNX29P1-201ENST00000548357 PARP4Q9UKK3 1724 aaKnown RBP22.01■■□□□ 1.11
SNX29P1-201ENST00000548357 SF3B2Q13435 895 aaKnown RBP22.01■■□□□ 1.11
SNX29P1-201ENST00000548357 ABTB2Q8N961 1025 aa22.01■■□□□ 1.11
SNX29P1-201ENST00000548357 SLIT3O75094 1523 aa22.01■■□□□ 1.11
SNX29P1-201ENST00000548357 RREB1Q92766 1687 aa22■■□□□ 1.11
SNX29P1-201ENST00000548357 USP6P35125 1406 aa21.99■■□□□ 1.11
SNX29P1-201ENST00000548357 USP35Q9P2H5 1018 aa21.99■■□□□ 1.11
SNX29P1-201ENST00000548357 SBF2Q86WG5 1849 aa21.99■■□□□ 1.11
SNX29P1-201ENST00000548357 CPDO75976 1380 aa21.99■■□□□ 1.11
SNX29P1-201ENST00000548357 NUP188Q5SRE5 1749 aa21.98■■□□□ 1.11
SNX29P1-201ENST00000548357 EN1Q05925 392 aaPredicted RBP21.98■■□□□ 1.11
SNX29P1-201ENST00000548357 LARP1Q6PKG0 1096 aaKnown RBP21.98■■□□□ 1.11
SNX29P1-201ENST00000548357 COL5A2P05997 1499 aaPredicted RBP21.97■■□□□ 1.11
SNX29P1-201ENST00000548357 PSDA5PKW4 1024 aaPredicted RBP21.97■■□□□ 1.11
SNX29P1-201ENST00000548357 CABP1Q9NZU7 370 aa21.97■■□□□ 1.11
SNX29P1-201ENST00000548357 MON2Q7Z3U7 1717 aa21.97■■□□□ 1.11
SNX29P1-201ENST00000548357 LRRC37A3O60309 1634 aa21.96■■□□□ 1.11
SNX29P1-201ENST00000548357 BAG6P46379 1132 aa21.96■■□□□ 1.11
SNX29P1-201ENST00000548357 NEUROD1Q13562 356 aa21.96■■□□□ 1.11
SNX29P1-201ENST00000548357 PEAK1Q9H792 1746 aa21.95■■□□□ 1.1
SNX29P1-201ENST00000548357 DISP2A7MBM2 1401 aa21.95■■□□□ 1.1
SNX29P1-201ENST00000548357 GCP02774 474 aa21.93■■□□□ 1.1
SNX29P1-201ENST00000548357 ROCK2O75116 1388 aaKnown RBP21.92■■□□□ 1.1
SNX29P1-201ENST00000548357 TRIM37O94972 964 aa21.92■■□□□ 1.1
SNX29P1-201ENST00000548357 EZH2Q15910 746 aaKnown RBP21.91■■□□□ 1.1
SNX29P1-201ENST00000548357 NLRP13Q86W25 1043 aa21.91■■□□□ 1.1
SNX29P1-201ENST00000548357 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
SNX29P1-201ENST00000548357 EVA1CP58658 441 aa21.9■■□□□ 1.1
SNX29P1-201ENST00000548357 BARGINQ6ZT62 677 aa21.9■■□□□ 1.1
SNX29P1-201ENST00000548357 BRD4O60885 1362 aaPredicted RBP21.88■■□□□ 1.09
SNX29P1-201ENST00000548357 USP54Q70EL1 1684 aa21.88■■□□□ 1.09
SNX29P1-201ENST00000548357 LTN1O94822 1766 aa21.87■■□□□ 1.09
SNX29P1-201ENST00000548357 EVC2Q86UK5 1308 aa21.87■■□□□ 1.09
SNX29P1-201ENST00000548357 NFAT5O94916 1531 aa21.87■■□□□ 1.09
SNX29P1-201ENST00000548357 NLRP6P59044 892 aa21.87■■□□□ 1.09
SNX29P1-201ENST00000548357 TCP11L2Q8N4U5 519 aa21.87■■□□□ 1.09
SNX29P1-201ENST00000548357 CAMKK2Q96RR4 588 aa21.86■■□□□ 1.09
SNX29P1-201ENST00000548357 CRB1P82279 1406 aa21.86■■□□□ 1.09
SNX29P1-201ENST00000548357 R3HDM1Q15032 1099 aaKnown RBP21.85■■□□□ 1.09
SNX29P1-201ENST00000548357 FAM196AQ6ZSG2 479 aa21.85■■□□□ 1.09
SNX29P1-201ENST00000548357 CPSF1Q10570 1443 aaKnown RBP21.85■■□□□ 1.09
SNX29P1-201ENST00000548357 AATKQ6ZMQ8 1374 aa21.85■■□□□ 1.09
SNX29P1-201ENST00000548357 CD163L1Q9NR16 1453 aa21.84■■□□□ 1.09
SNX29P1-201ENST00000548357 TTC21BQ7Z4L5 1316 aa21.84■■□□□ 1.09
SNX29P1-201ENST00000548357 AXIN2Q9Y2T1 843 aa21.84■■□□□ 1.09
SNX29P1-201ENST00000548357 RGPD3A6NKT7 1758 aaPredicted RBP21.82■■□□□ 1.08
SNX29P1-201ENST00000548357 RGPD4Q7Z3J3 1758 aa21.82■■□□□ 1.08
SNX29P1-201ENST00000548357 APBA3O96018 575 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms