RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 CTHP32929 405 aa9.06□□□□□ -0.96
RPAP3-206ENST00000548296 ZNF511Q8NB15 262 aa9.06□□□□□ -0.96
RPAP3-206ENST00000548296 CFAP99D6REC4 459 aa9.05□□□□□ -0.96
RPAP3-206ENST00000548296 MPNDQ8N594 471 aa9.05□□□□□ -0.96
RPAP3-206ENST00000548296 RSPH6AQ9H0K4 717 aa9.05□□□□□ -0.96
RPAP3-206ENST00000548296 SLC24A3Q9HC58 644 aa9.05□□□□□ -0.96
RPAP3-206ENST00000548296 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
RPAP3-206ENST00000548296 TRIM47Q96LD4 638 aa9.04□□□□□ -0.96
RPAP3-206ENST00000548296 NUTM2BA6NNL0 878 aaPredicted RBP9.03□□□□□ -0.96
RPAP3-206ENST00000548296 NUTM2EB1AL46 878 aaPredicted RBP9.03□□□□□ -0.96
RPAP3-206ENST00000548296 NUTM2DQ5VT03 806 aaPredicted RBP9.03□□□□□ -0.96
RPAP3-206ENST00000548296 MYSM1Q5VVJ2 828 aa9.03□□□□□ -0.96
RPAP3-206ENST00000548296 NUTM2AQ8IVF1 878 aaPredicted RBP9.03□□□□□ -0.96
RPAP3-206ENST00000548296 FAM174AQ8TBP5 190 aa9.02□□□□□ -0.97
RPAP3-206ENST00000548296 CAPN5O15484 640 aaPredicted RBP9.01□□□□□ -0.97
RPAP3-206ENST00000548296 CSPP1Q1MSJ5 1256 aa9.01□□□□□ -0.97
RPAP3-206ENST00000548296 TMEM132AQ24JP5 1023 aa9.01□□□□□ -0.97
RPAP3-206ENST00000548296 CABLES1Q8TDN4 633 aa9.01□□□□□ -0.97
RPAP3-206ENST00000548296 WFS1O76024 890 aa9□□□□□ -0.97
RPAP3-206ENST00000548296 F12P00748 615 aaPredicted RBP9□□□□□ -0.97
RPAP3-206ENST00000548296 ARMC2Q8NEN0 867 aa9□□□□□ -0.97
RPAP3-206ENST00000548296 LILRB3O75022 631 aa8.99□□□□□ -0.97
RPAP3-206ENST00000548296 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
RPAP3-206ENST00000548296 HELBQ8NG08 1087 aaPredicted RBP8.99□□□□□ -0.97
RPAP3-206ENST00000548296 TSC1Q92574 1164 aa8.99□□□□□ -0.97
RPAP3-206ENST00000548296 LIMD1Q9UGP4 676 aa8.99□□□□□ -0.97
RPAP3-206ENST00000548296 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
RPAP3-206ENST00000548296 MAP10Q9P2G4 905 aa8.98□□□□□ -0.97
RPAP3-206ENST00000548296 CLK2P49760 499 aaKnown RBP8.97□□□□□ -0.97
RPAP3-206ENST00000548296 BPHLQ86WA6 291 aaPredicted RBP8.97□□□□□ -0.97
RPAP3-206ENST00000548296 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.98
RPAP3-206ENST00000548296 NNTQ13423 1086 aa8.96□□□□□ -0.98
RPAP3-206ENST00000548296 AGERQ15109 404 aa8.96□□□□□ -0.98
RPAP3-206ENST00000548296 QPCTQ16769 361 aa8.96□□□□□ -0.98
RPAP3-206ENST00000548296 CDK15Q96Q40 435 aa8.96□□□□□ -0.98
RPAP3-206ENST00000548296 TLL2Q9Y6L7 1015 aa8.96□□□□□ -0.98
RPAP3-206ENST00000548296 PER1O15534 1290 aaPredicted RBP8.95□□□□□ -0.98
RPAP3-206ENST00000548296 NFX1Q12986 1120 aaKnown RBP8.95□□□□□ -0.98
RPAP3-206ENST00000548296 TERTO14746 1132 aaKnown RBP8.94□□□□□ -0.98
RPAP3-206ENST00000548296 ADH1CP00326 375 aa8.94□□□□□ -0.98
RPAP3-206ENST00000548296 NBPF14Q5TI25 921 aa8.94□□□□□ -0.98
RPAP3-206ENST00000548296 FOXJ1Q92949 421 aa8.94□□□□□ -0.98
RPAP3-206ENST00000548296 NR5A1Q13285 461 aa8.93□□□□□ -0.98
RPAP3-206ENST00000548296 POLR3EQ9NVU0 708 aa8.93□□□□□ -0.98
RPAP3-206ENST00000548296 SCARF1Q14162 830 aa8.92□□□□□ -0.98
RPAP3-206ENST00000548296 ARID5BQ14865 1188 aa8.92□□□□□ -0.98
RPAP3-206ENST00000548296 RTL5Q5HYW3 569 aaPredicted RBP8.92□□□□□ -0.98
RPAP3-206ENST00000548296 TRIM46Q7Z4K8 759 aa8.92□□□□□ -0.98
RPAP3-206ENST00000548296 SLC16A10Q8TF71 515 aa8.92□□□□□ -0.98
RPAP3-206ENST00000548296 BMP1P13497 986 aa8.91□□□□□ -0.98
RPAP3-206ENST00000548296 WDR4P57081 412 aaKnown RBP8.91□□□□□ -0.98
RPAP3-206ENST00000548296 SKIV2LQ15477 1246 aaKnown RBP8.91□□□□□ -0.98
RPAP3-206ENST00000548296 GPKOWQ92917 476 aaPredicted RBP eCLIP8.91□□□□□ -0.98
RPAP3-206ENST00000548296 DDRGK1Q96HY6 314 aa8.91□□□□□ -0.98
RPAP3-206ENST00000548296 WIPF1O43516 503 aa8.9□□□□□ -0.98
RPAP3-206ENST00000548296 NPAS3Q8IXF0 933 aa8.9□□□□□ -0.98
RPAP3-206ENST00000548296 TIMP2P16035 220 aa8.89□□□□□ -0.99
RPAP3-206ENST00000548296 INSM1Q01101 510 aaPredicted RBP8.89□□□□□ -0.99
RPAP3-206ENST00000548296 MRPL14Q6P1L8 145 aaKnown RBP8.89□□□□□ -0.99
RPAP3-206ENST00000548296 ZFP42Q96MM3 310 aa8.89□□□□□ -0.99
RPAP3-206ENST00000548296 NXF1Q9UBU9 619 aaKnown RBP8.89□□□□□ -0.99
RPAP3-206ENST00000548296 NEUROD2Q15784 382 aa8.88□□□□□ -0.99
RPAP3-206ENST00000548296 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
RPAP3-206ENST00000548296 KLF16Q9BXK1 252 aaPredicted RBP8.88□□□□□ -0.99
RPAP3-206ENST00000548296 GTF3C3Q9Y5Q9 886 aa8.88□□□□□ -0.99
RPAP3-206ENST00000548296 SH3D19Q5HYK7 790 aa8.87□□□□□ -0.99
RPAP3-206ENST00000548296 SH3RF1Q7Z6J0 888 aa8.87□□□□□ -0.99
RPAP3-206ENST00000548296 KDM4CQ9H3R0 1056 aa8.87□□□□□ -0.99
RPAP3-206ENST00000548296 ATP1B4Q9UN42 357 aaPredicted RBP8.87□□□□□ -0.99
RPAP3-206ENST00000548296 MAP4K5Q9Y4K4 846 aa8.87□□□□□ -0.99
RPAP3-206ENST00000548296 ZIC2O95409 532 aaPredicted RBP8.86□□□□□ -0.99
RPAP3-206ENST00000548296 GRM5P41594 1212 aa8.86□□□□□ -0.99
RPAP3-206ENST00000548296 CTDSPL2Q05D32 466 aa8.86□□□□□ -0.99
RPAP3-206ENST00000548296 SH3BP5LQ7L8J4 393 aa8.86□□□□□ -0.99
RPAP3-206ENST00000548296 TRMT44Q8IYL2 757 aaKnown RBP8.86□□□□□ -0.99
RPAP3-206ENST00000548296 C1QTNF2Q9BXJ5 285 aa8.86□□□□□ -0.99
RPAP3-206ENST00000548296 UPP2O95045 317 aa8.84□□□□□ -0.99
RPAP3-206ENST00000548296 VASH1Q7L8A9 365 aaPredicted RBP8.84□□□□□ -0.99
RPAP3-206ENST00000548296 PURBQ96QR8 312 aaKnown RBP8.84□□□□□ -0.99
RPAP3-206ENST00000548296 MAGEB6P1A0A0J9YX57 407 aa8.83□□□□□ -1
RPAP3-206ENST00000548296 PPP2R2DQ66LE6 453 aa8.83□□□□□ -1
RPAP3-206ENST00000548296 PDXDC2PQ6P474 469 aa8.83□□□□□ -1
RPAP3-206ENST00000548296 IRF7Q92985 503 aa8.83□□□□□ -1
RPAP3-206ENST00000548296 ITPKCQ96DU7 683 aa8.83□□□□□ -1
RPAP3-206ENST00000548296 STK17AQ9UEE5 414 aa8.83□□□□□ -1
RPAP3-206ENST00000548296 ZC3H4Q9UPT8 1303 aaKnown RBP8.82□□□□□ -1
RPAP3-206ENST00000548296 NR3C2P08235 984 aa8.82□□□□□ -1
RPAP3-206ENST00000548296 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.82□□□□□ -1
RPAP3-206ENST00000548296 FAM117AQ9C073 453 aa8.82□□□□□ -1
RPAP3-206ENST00000548296 GPBP1L1Q9HC44 474 aaPredicted RBP8.82□□□□□ -1
RPAP3-206ENST00000548296 FKBPLQ9UIM3 349 aa8.82□□□□□ -1
RPAP3-206ENST00000548296 CDV3Q9UKY7 258 aaKnown RBP8.82□□□□□ -1
RPAP3-206ENST00000548296 EMILIN1Q9Y6C2 1016 aa8.82□□□□□ -1
RPAP3-206ENST00000548296 ERICH6Q7L0X2 663 aa8.81□□□□□ -1
RPAP3-206ENST00000548296 PNMA1Q8ND90 353 aa8.81□□□□□ -1
RPAP3-206ENST00000548296 ZFAND3Q9H8U3 227 aa8.81□□□□□ -1
RPAP3-206ENST00000548296 FSHRP23945 695 aa8.8□□□□□ -1
RPAP3-206ENST00000548296 PROCA1Q8NCQ7 364 aaPredicted RBP8.8□□□□□ -1
RPAP3-206ENST00000548296 ARHGAP9Q9BRR9 750 aa8.8□□□□□ -1
RPAP3-206ENST00000548296 H3BM21 787 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms